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The map label for this gene is 238895333

Identifier: 238895333

GI number: 238895333

Start: 3217340

End: 3217822

Strand: Direct

Name: 238895333

Synonym: KP1_3393

Alternate gene names: NA

Gene position: 3217340-3217822 (Clockwise)

Preceding gene: 238895331

Following gene: 238895334

Centisome position: 61.3

GC content: 49.28

Gene sequence:

>483_bases
ATGGCGATGAACGGAACAATCACAACGTGGTTTAAAGATAAAGGTTTTGGATTTATCAAAGATGAAAACGGCGAAAATCG
TTATTTTCACGTGATTAAGGTCGCCAATCCTGATCTTATCAAGAAAGACGCGGCGGTGACTTTCGAACCTACCACCAACA
ATAAAGGGCTGTCGGCCTACGCGGTGAAGGTCATTCCGGAAAGCAAATATATCTATATTGCCGGCGAGCGGTTGAAGCTG
ACCTCCATCAAATCCTATGTGGTGTACCGGGAAGAAGAGCCGGTCGAGACCCGCGTCGATAAAGAAAACGCCGTGCTGTC
GGTCGGGCTGCTGATGAACAGCATCCGGCCAAAAGCCACGGTGCAACCGGGAGAGATGCGCTCGGTGAAAAAGCTGGCGA
TCACCACCTTTCAGGGGACAACCCTGATCTTTTCGGAAGACGAAATCGATATCGATGCCACGGTAAAACTGCTTAAGGTG
TAA

Upstream 100 bases:

>100_bases
CATTTATCACCCACACTTATCGCAAAGGCATGGCCTGTACAGGCAATGTGCTTTACACTGCGCGCTGCAAAATTTGTGTT
AACCAACGAGTAATACGGTA

Downstream 100 bases:

>100_bases
GCCCTGGCGCGCGGTTTCCCGCGCGCCCGAAGTCCTGCCCGATATGCTACCCGCCATCGCCCCTCGCCGGACGGGGCGAT
GGCGCCAGAGAGCCGATAAG

Product: cold shock protein E

Products: NA

Alternate protein names: Cold Shock Protein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAYAVKVIPESKYIYIAGERLKL
TSIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKATVQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV

Sequences:

>Translated_160_residues
MAMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAYAVKVIPESKYIYIAGERLKL
TSIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKATVQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV
>Mature_159_residues
AMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAYAVKVIPESKYIYIAGERLKLT
SIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKATVQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17953; Mature: 17822

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAY
CCCCCEEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEE
AVKVIPESKYIYIAGERLKLTSIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKAT
EEEEECCCCEEEEECCEEEEEEEEEEEEEECCCCCHHCCCCCCCEEEEEHHHHCCCCCCE
VQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV
ECCCCCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure 
AMNGTITTWFKDKGFGFIKDENGENRYFHVIKVANPDLIKKDAAVTFEPTTNNKGLSAY
CCCCEEEEEEECCCCEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEE
AVKVIPESKYIYIAGERLKLTSIKSYVVYREEEPVETRVDKENAVLSVGLLMNSIRPKAT
EEEEECCCCEEEEECCEEEEEEEEEEEEEECCCCCHHCCCCCCCEEEEEHHHHCCCCCCE
VQPGEMRSVKKLAITTFQGTTLIFSEDEIDIDATVKLLKV
ECCCCCCCEEEEEEEEECCEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA