Click here to switch to the map view.

The map label for this gene is ydhF [H]

Identifier: 238895029

GI number: 238895029

Start: 2915090

End: 2915986

Strand: Reverse

Name: ydhF [H]

Synonym: KP1_3059

Alternate gene names: 238895029

Gene position: 2915986-2915090 (Counterclockwise)

Preceding gene: 238895030

Following gene: 238895028

Centisome position: 55.56

GC content: 58.64

Gene sequence:

>897_bases
ATGGTTCAGCGTATTGCTATGGCTCCCCAGGGGCCGGAATTTTCACGTTTTGTGATGGGCTACTGGCGTCTGATGGACTG
GAAAATGTCGCCTGGCGAGCTGGTCAGCTTTATTGAGCAGCATCTCGATTTAGGCGTAACCACCGTCGATCACGCCGATA
TCTATGGCGATTATCAGTGTGAGGCTGCCTTTGGCGAAGCGCTGAAGCGAGCGCCGCATCTGCGTAGCCGGATGGAAATC
GTCAGCAAATGCGGTATCGCCACCCGGGCGCGCGCTGAGAACACCATTGGCCACTACATTACCGACCGCGATCACATCGT
GCTCAGCGCCGAGCAATCGCTGCGTAATCTGGCGACGGACCATCTCGACTTGCTGCTGATCCACCGGCCGGACCCACTGA
TGGACGCCGACGAGGTAGCCGAAGCTTTTCTCGCGCTGCATCATAGCGGTAAAGTGCGCCATTTTGGCGTCTCGAACTTT
ACCCCCGCCCAGTTCACCTTGCTGCAGTCACGTCTGCCGTTTACCCTGGCCACCAACCAGGTCGAAATTTCACCGGTGCA
TCAGCCGCTGCTGCTCGACGGTACTCTCGATCAGCTGCAGCAACTGCGTATTCGTCCGATGGCGTGGTCTTGTCTTGGCG
GTGGTCGCCTGTTTAACGAAGAGGGCTTCCAGGCGCTGCGCGATGAGCTGGCGCAGGTGGCGCACGAGCTTAACGCCGAC
AGCATCGAACAGGTAGTTTATGCCTGGGTGCTGCGTCTGCCGTCGCAGCCTCTGCCGATTATTGGCTCGGGCAAAATCGA
GCGCGTGCGCTCGGCGATTGTGGCTGAAAAACTCAGCATGACCCGTCAGCAGTGGTTCCGCATCCGTAAAGCCGCGCTCG
GGTACGACGTACCGTAA

Upstream 100 bases:

>100_bases
CGCGAACAGGCCGGAGCCGGCGGAAGAACCGCAGCAACCCTCACTGTTTTAAGCCAAAAATTACGTATACTCAGAGCACT
TTTTTATTGAGGAAGCGGTT

Downstream 100 bases:

>100_bases
CGGGCATTTCCCCTCCGGAAAGGCGTTCCTGGTTTACACTTAACAGGGAGACAGCCATCCGGAGGTGTTATGCAACGATG
TATTCTCGCGATCTTATCCC

Product: putative NAD(P)-linked oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQCEAAFGEALKRAPHLRSRMEI
VSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATDHLDLLLIHRPDPLMDADEVAEAFLALHHSGKVRHFGVSNF
TPAQFTLLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQALRDELAQVAHELNAD
SIEQVVYAWVLRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP

Sequences:

>Translated_298_residues
MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQCEAAFGEALKRAPHLRSRMEI
VSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATDHLDLLLIHRPDPLMDADEVAEAFLALHHSGKVRHFGVSNF
TPAQFTLLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQALRDELAQVAHELNAD
SIEQVVYAWVLRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP
>Mature_298_residues
MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQCEAAFGEALKRAPHLRSRMEI
VSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATDHLDLLLIHRPDPLMDADEVAEAFLALHHSGKVRHFGVSNF
TPAQFTLLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQALRDELAQVAHELNAD
SIEQVVYAWVLRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI48994888, Length=298, Percent_Identity=88.5906040268456, Blast_Score=545, Evalue=1e-156,
Organism=Escherichia coli, GI1786400, Length=268, Percent_Identity=29.4776119402985, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788081, Length=220, Percent_Identity=33.1818181818182, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081735, Length=300, Percent_Identity=25, Blast_Score=65, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6319958, Length=295, Percent_Identity=24.406779661017, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323998, Length=295, Percent_Identity=23.728813559322, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33640; Mature: 33640

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQC
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCHHCCCCCCH
EAAFGEALKRAPHLRSRMEIVSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATD
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCEEEEHHHHHHHHHHH
HLDLLLIHRPDPLMDADEVAEAFLALHHSGKVRHFGVSNFTPAQFTLLQSRLPFTLATNQ
CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEECCE
VEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQALRDELAQVAHELNAD
EEECCCCCCEEECCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHH
SIEQVVYAWVLRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVQRIAMAPQGPEFSRFVMGYWRLMDWKMSPGELVSFIEQHLDLGVTTVDHADIYGDYQC
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCHHCCCCCCH
EAAFGEALKRAPHLRSRMEIVSKCGIATRARAENTIGHYITDRDHIVLSAEQSLRNLATD
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCCCCEECCCCCEEEEHHHHHHHHHHH
HLDLLLIHRPDPLMDADEVAEAFLALHHSGKVRHFGVSNFTPAQFTLLQSRLPFTLATNQ
CEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEEEECCE
VEISPVHQPLLLDGTLDQLQQLRIRPMAWSCLGGGRLFNEEGFQALRDELAQVAHELNAD
EEECCCCCCEEECCCHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHH
SIEQVVYAWVLRLPSQPLPIIGSGKIERVRSAIVAEKLSMTRQQWFRIRKAALGYDVP
HHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]