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The map label for this gene is sodC [H]

Identifier: 238895028

GI number: 238895028

Start: 2914499

End: 2915020

Strand: Reverse

Name: sodC [H]

Synonym: KP1_3058

Alternate gene names: 238895028

Gene position: 2915020-2914499 (Counterclockwise)

Preceding gene: 238895029

Following gene: 238895024

Centisome position: 55.54

GC content: 62.26

Gene sequence:

>522_bases
ATGCAACGATGTATTCTCGCGATCTTATCCCTCGCATTTTGCGCTGGCGCACAGGCCGTTAGTGAAGATGTGCAACTTAA
TCTCGTGACCACCCAGGGCGTCGGTCAGACCATCGGCAGCGTCAAAATCACCGAAACCGACCGCGGACTCGAGTTCGCCC
CCACTCTGCGGGCGCTACCGCCGGGTAAGCACGGGTTTCATATTCATGCCGAAGGCAGCTGCCAGCCAGCGATGAAAGAA
GGTAAAGCCGTGGCCGCCGGGGCGGCGGGCGGACATTACGATCCGCAGCATACCGGCAAACACGAAGGGCCGTTGGGGGC
CGGGCATCTTGGCGACCTGCCCCTGCTGGTGGTCAACGATGCGGGCGTAGCCGACCAGCCGATTATTGCTCCGCGCCTGA
AAACGCTGGCGGAGGTGAAAGGGAAAGCGCTGATGGTCCACGTAGGCGGGGATAACATGGCCGACAGTCCGCAGCCGCTG
GGCGGCGGCGGCGAACGGTTTGCCTGCGGGGTGATTAAGTAG

Upstream 100 bases:

>100_bases
TAAAGCCGCGCTCGGGTACGACGTACCGTAACGGGCATTTCCCCTCCGGAAAGGCGTTCCTGGTTTACACTTAACAGGGA
GACAGCCATCCGGAGGTGTT

Downstream 100 bases:

>100_bases
TTCCTTCGCCAATTGTGCCGGCCACCGGGGCCTGTTCCAGCTGCGACAGGGCGCAGTACAGTCGCCAAATCGCGGCGGCC
AGTTCCCGCGCCGCCGGCTG

Product: superoxide dismutase

Products: NA

Alternate protein names: Bacteriocuprein [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQRCILAILSLAFCAGAQAVSEDVQLNLVTTQGVGQTIGSVKITETDRGLEFAPTLRALPPGKHGFHIHAEGSCQPAMKE
GKAVAAGAAGGHYDPQHTGKHEGPLGAGHLGDLPLLVVNDAGVADQPIIAPRLKTLAEVKGKALMVHVGGDNMADSPQPL
GGGGERFACGVIK

Sequences:

>Translated_173_residues
MQRCILAILSLAFCAGAQAVSEDVQLNLVTTQGVGQTIGSVKITETDRGLEFAPTLRALPPGKHGFHIHAEGSCQPAMKE
GKAVAAGAAGGHYDPQHTGKHEGPLGAGHLGDLPLLVVNDAGVADQPIIAPRLKTLAEVKGKALMVHVGGDNMADSPQPL
GGGGERFACGVIK
>Mature_173_residues
MQRCILAILSLAFCAGAQAVSEDVQLNLVTTQGVGQTIGSVKITETDRGLEFAPTLRALPPGKHGFHIHAEGSCQPAMKE
GKAVAAGAAGGHYDPQHTGKHEGPLGAGHLGDLPLLVVNDAGVADQPIIAPRLKTLAEVKGKALMVHVGGDNMADSPQPL
GGGGERFACGVIK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=173, Percent_Identity=73.9884393063584, Blast_Score=265, Evalue=9e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17666; Mature: 17666

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRCILAILSLAFCAGAQAVSEDVQLNLVTTQGVGQTIGSVKITETDRGLEFAPTLRALP
CHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCC
PGKHGFHIHAEGSCQPAMKEGKAVAAGAAGGHYDPQHTGKHEGPLGAGHLGDLPLLVVND
CCCCCEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
AGVADQPIIAPRLKTLAEVKGKALMVHVGGDNMADSPQPLGGGGERFACGVIK
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MQRCILAILSLAFCAGAQAVSEDVQLNLVTTQGVGQTIGSVKITETDRGLEFAPTLRALP
CHHHHHHHHHHHHHCCCHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCCEECCCCCCCC
PGKHGFHIHAEGSCQPAMKEGKAVAAGAAGGHYDPQHTGKHEGPLGAGHLGDLPLLVVND
CCCCCEEEEECCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
AGVADQPIIAPRLKTLAEVKGKALMVHVGGDNMADSPQPLGGGGERFACGVIK
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]