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The map label for this gene is yhcM [H]

Identifier: 238894856

GI number: 238894856

Start: 2742176

End: 2743351

Strand: Reverse

Name: yhcM [H]

Synonym: KP1_2872

Alternate gene names: 238894856

Gene position: 2743351-2742176 (Counterclockwise)

Preceding gene: 238894857

Following gene: 238894853

Centisome position: 52.27

GC content: 61.22

Gene sequence:

>1176_bases
GTGTCGGAGAGGCGTAGGGGCTGGCGGCGGAGCAGCGGAAACGGCCGCTCGTCGCGCGATTCGCCATCCCGCGGGAAAGC
GGCTAGAATGGCCTCCTCGCAGGAGGTTATAAGAATGTTAAATAATGGATGTGTACCCTCGGAATCTGGTCCCACAGAGG
TGACGGCTGATTTTCGTTTTACCCGCGTGATGGCCGAGCAGGCGGCGCGGGCGCGTCTGACGCTGGACGACGATCAGCTG
TCACTCATCGCCCGCCTTGACGCCCTCGGTCAGCAGTTGGTGTCCACGACAGGCAGCCCGCAGGGGGTATACGTCTGGGG
ACGTACCGGGCGAGGGAAAAGCTTTATCCTCGACCACTTTTTCGCCAGCCTGCCGCTCGCCGCCAGGCGGCGGGTCCATT
TTCATCACTTCTTCCGCGAACTGCACCAGCGGCTGAATGCCCCCGGAGCGCCCGACCTGCAGACGGTGATGAGGCAGATG
ACATCCGGTTGCCGCCTGCTATGCTTCGACGAATTTCATCTGCACGACCCCGGCGACGCCATGCTGATTAAAGTCTTGCT
GGAACACCTCTTTCAACACGGTATCGTGCTGCTGGCCACCTCAAACTACCCGCCGGAGATGCTGCTGCCCAATCCGCTGT
ATCACGATCGCTTTTTACCGTCGATCGCGCTGATCCGCGCCCATCTAACGGTGGTGGCGCTGAACGGCGAGGAAGATTAT
CGCGAACGGCATCTGAGCCAGGATAACGCCTTCTGCAGCGGGCGGATGTGGGTTAATCCGAATGCACAACAGCGTCAGCT
GTATGACCTGCCGTCGCTGCCTGGCGAACCGGTTTCGCTGACGGTAGGCTATCGCACGCTGCTGGCGGCCGCGGCGTCGC
CCGCGTTGCTGCACTTCACCTTTACCCAGCTTTGTCAGGCCGCCACGGCGGTGATGGACTATCTGAAGCTCTGCGAAAGC
TATGCCGTCTGGCTACTGGACGAGGTGCCGCCATTGGCTACGGTGGGGCCGGCGGCCCAGCAGCGCTTTATCAATGTGAT
TGATGTGCTGTATGAAAAGCAGATCCGCCTGCTGCTGGTGACCCGCTGCGACCTGGAGACGCTGGTGGCAGGGGTGGAAC
TGGAGGATATTCAACGAACGCGGAGTCGACTGCAACAGCTGCCGCGGGCGGTATAA

Upstream 100 bases:

>100_bases
ATTTGCGCGCAGCTGATTAGCCATAAGCAGCACCAAAAAACGCTGGCGCAAATTATGGCGCAGATGGGCGTTCAGCAGAA
CGTCACATCGGTGCACTGGC

Downstream 100 bases:

>100_bases
GGAAAACGCCCCGGCGGGAGCCGGGGCGAGAGGATTACAGATCGAAGCGGTCGAGGTTCATCACCTTGGTCCAGGCGGCA
ACGAAGTCATGCACCAGCTT

Product: putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MSERRRGWRRSSGNGRSSRDSPSRGKAARMASSQEVIRMLNNGCVPSESGPTEVTADFRFTRVMAEQAARARLTLDDDQL
SLIARLDALGQQLVSTTGSPQGVYVWGRTGRGKSFILDHFFASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQTVMRQM
TSGCRLLCFDEFHLHDPGDAMLIKVLLEHLFQHGIVLLATSNYPPEMLLPNPLYHDRFLPSIALIRAHLTVVALNGEEDY
RERHLSQDNAFCSGRMWVNPNAQQRQLYDLPSLPGEPVSLTVGYRTLLAAAASPALLHFTFTQLCQAATAVMDYLKLCES
YAVWLLDEVPPLATVGPAAQQRFINVIDVLYEKQIRLLLVTRCDLETLVAGVELEDIQRTRSRLQQLPRAV

Sequences:

>Translated_391_residues
MSERRRGWRRSSGNGRSSRDSPSRGKAARMASSQEVIRMLNNGCVPSESGPTEVTADFRFTRVMAEQAARARLTLDDDQL
SLIARLDALGQQLVSTTGSPQGVYVWGRTGRGKSFILDHFFASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQTVMRQM
TSGCRLLCFDEFHLHDPGDAMLIKVLLEHLFQHGIVLLATSNYPPEMLLPNPLYHDRFLPSIALIRAHLTVVALNGEEDY
RERHLSQDNAFCSGRMWVNPNAQQRQLYDLPSLPGEPVSLTVGYRTLLAAAASPALLHFTFTQLCQAATAVMDYLKLCES
YAVWLLDEVPPLATVGPAAQQRFINVIDVLYEKQIRLLLVTRCDLETLVAGVELEDIQRTRSRLQQLPRAV
>Mature_390_residues
SERRRGWRRSSGNGRSSRDSPSRGKAARMASSQEVIRMLNNGCVPSESGPTEVTADFRFTRVMAEQAARARLTLDDDQLS
LIARLDALGQQLVSTTGSPQGVYVWGRTGRGKSFILDHFFASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQTVMRQMT
SGCRLLCFDEFHLHDPGDAMLIKVLLEHLFQHGIVLLATSNYPPEMLLPNPLYHDRFLPSIALIRAHLTVVALNGEEDYR
ERHLSQDNAFCSGRMWVNPNAQQRQLYDLPSLPGEPVSLTVGYRTLLAAAASPALLHFTFTQLCQAATAVMDYLKLCESY
AVWLLDEVPPLATVGPAAQQRFINVIDVLYEKQIRLLLVTRCDLETLVAGVELEDIQRTRSRLQQLPRAV

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=318, Percent_Identity=29.874213836478, Blast_Score=155, Evalue=4e-38,
Organism=Escherichia coli, GI1789627, Length=320, Percent_Identity=33.75, Blast_Score=170, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17505769, Length=272, Percent_Identity=28.3088235294118, Blast_Score=137, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320783, Length=338, Percent_Identity=28.4023668639053, Blast_Score=129, Evalue=6e-31,
Organism=Drosophila melanogaster, GI20129913, Length=310, Percent_Identity=32.5806451612903, Blast_Score=139, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 43978; Mature: 43847

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRRGWRRSSGNGRSSRDSPSRGKAARMASSQEVIRMLNNGCVPSESGPTEVTADFRF
CCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHH
TRVMAEQAARARLTLDDDQLSLIARLDALGQQLVSTTGSPQGVYVWGRTGRGKSFILDHF
HHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH
FASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQTVMRQMTSGCRLLCFDEFHLHDPGDA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHH
MLIKVLLEHLFQHGIVLLATSNYPPEMLLPNPLYHDRFLPSIALIRAHLTVVALNGEEDY
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHH
RERHLSQDNAFCSGRMWVNPNAQQRQLYDLPSLPGEPVSLTVGYRTLLAAAASPALLHFT
HHHHCCCCCCEECCEEEECCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHH
FTQLCQAATAVMDYLKLCESYAVWLLDEVPPLATVGPAAQQRFINVIDVLYEKQIRLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEE
TRCDLETLVAGVELEDIQRTRSRLQQLPRAV
ECCCHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SERRRGWRRSSGNGRSSRDSPSRGKAARMASSQEVIRMLNNGCVPSESGPTEVTADFRF
CCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHH
TRVMAEQAARARLTLDDDQLSLIARLDALGQQLVSTTGSPQGVYVWGRTGRGKSFILDHF
HHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH
FASLPLAARRRVHFHHFFRELHQRLNAPGAPDLQTVMRQMTSGCRLLCFDEFHLHDPGDA
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHH
MLIKVLLEHLFQHGIVLLATSNYPPEMLLPNPLYHDRFLPSIALIRAHLTVVALNGEEDY
HHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHH
RERHLSQDNAFCSGRMWVNPNAQQRQLYDLPSLPGEPVSLTVGYRTLLAAAASPALLHFT
HHHHCCCCCCEECCEEEECCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHH
FTQLCQAATAVMDYLKLCESYAVWLLDEVPPLATVGPAAQQRFINVIDVLYEKQIRLLLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEE
TRCDLETLVAGVELEDIQRTRSRLQQLPRAV
ECCCHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]