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The map label for this gene is yfhH [C]

Identifier: 238894803

GI number: 238894803

Start: 2684947

End: 2685786

Strand: Reverse

Name: yfhH [C]

Synonym: KP1_2815

Alternate gene names: 238894803

Gene position: 2685786-2684947 (Counterclockwise)

Preceding gene: 238894809

Following gene: 238894802

Centisome position: 51.17

GC content: 62.86

Gene sequence:

>840_bases
ATGCAACAACTCGATGAACGACTGAAAGGGCAATACGCCTCGCTGTCGCCGCAGGAGCAGCGGGTGGCGGATTTCATCTT
TGACCACTTTGACGACCTGATAAGCTACAACAGCGCCGAGCTGGCGCAGCTGAGCGGCGTGTCGAAAGCCACCGTCAGCC
GGCTGTTTAAGCGCCTCGGTTACGACAAATATAAGGATATGCGCGATGAACTGCGCACTCTGCGTCAGAGCGGGATGCCG
CTCACCGACCAGCGCGACGCGGTGCAGGGTAACACGCTGCTGGCGCGCCATTATAAGCAGGAGATGGCAAACCTCACCCA
GTGGGTCAACGCCCTCGACGCCCGCCAGTTCGATGAGGCGCTGACGGCGATGGTGGCCGCCCGCCGCATTGTGGTGATTG
GCATGCGCAACGCCTATCCGGCGGCGCTGCATCTGCGCCAGCAGCTGCTGCAGGCCCGCGGCCAGGTGCTGGTGCTGCCC
CAGCCGGGTCAGAGTCTCAGCGAAGAGCTGGTCGATCTGACCGCCGATGATCTGGTGGTAATGATGGCGTTTCGCCGCCG
GCCGCGAATAGTACGCCCGCTGCTGCAGCAGCTGCAGCGCGACGGGGTGCCGGTCCTGTTAATGTGCGAGCCGCAGGCCC
ACAGCCTGTTTCCGCTCTCCCGCTGGCAGCTCTGCGCGCCGCTGGACAGCGTCTCCGCCTACGATAGCTATGCCTCGGTC
AACAGCCTGATTAATCTGCTGGCCAATGCCTTTCTCCATGAAACGCTCGACAGCGGTCGTCCGCGCATCCACGAGATCGC
CACGCTTTACCAGCAGCTGGACGAGCTGGAACAACGCTGA

Upstream 100 bases:

>100_bases
AAACGATGACCAGAATTTTCCCACTGGCACGCTATGTGTAAGGCATAGCAGATACAGTATGATGAGGAATGGATGATGAA
ACGAAAGTTACAGGGGCGCT

Downstream 100 bases:

>100_bases
TGGGGCGCCAGCGTGGTGCTGTGCATTATTATGGTGCAATAAAAACCACGTGATGGCGCCGCCGCTCTCTGAGGACTTTT
CCGTTAGCGCTTGTCCTTTC

Product: putative sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLGYDKYKDMRDELRTLRQSGMP
LTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFDEALTAMVAARRIVVIGMRNAYPAALHLRQQLLQARGQVLVLP
QPGQSLSEELVDLTADDLVVMMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV
NSLINLLANAFLHETLDSGRPRIHEIATLYQQLDELEQR

Sequences:

>Translated_279_residues
MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLGYDKYKDMRDELRTLRQSGMP
LTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFDEALTAMVAARRIVVIGMRNAYPAALHLRQQLLQARGQVLVLP
QPGQSLSEELVDLTADDLVVMMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV
NSLINLLANAFLHETLDSGRPRIHEIATLYQQLDELEQR
>Mature_279_residues
MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLGYDKYKDMRDELRTLRQSGMP
LTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFDEALTAMVAARRIVVIGMRNAYPAALHLRQQLLQARGQVLVLP
QPGQSLSEELVDLTADDLVVMMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV
NSLINLLANAFLHETLDSGRPRIHEIATLYQQLDELEQR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 31833; Mature: 31833

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLG
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHC
YDKYKDMRDELRTLRQSGMPLTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFDEA
CHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAMVAARRIVVIGMRNAYPAALHLRQQLLQARGQVLVLPQPGQSLSEELVDLTADDLVV
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
MMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV
HHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
NSLINLLANAFLHETLDSGRPRIHEIATLYQQLDELEQR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQQLDERLKGQYASLSPQEQRVADFIFDHFDDLISYNSAELAQLSGVSKATVSRLFKRLG
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHC
YDKYKDMRDELRTLRQSGMPLTDQRDAVQGNTLLARHYKQEMANLTQWVNALDARQFDEA
CHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTAMVAARRIVVIGMRNAYPAALHLRQQLLQARGQVLVLPQPGQSLSEELVDLTADDLVV
HHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
MMAFRRRPRIVRPLLQQLQRDGVPVLLMCEPQAHSLFPLSRWQLCAPLDSVSAYDSYASV
HHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
NSLINLLANAFLHETLDSGRPRIHEIATLYQQLDELEQR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8051030 [H]