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The map label for this gene is amaB [H]

Identifier: 238894797

GI number: 238894797

Start: 2679385

End: 2680644

Strand: Reverse

Name: amaB [H]

Synonym: KP1_2808

Alternate gene names: 238894797

Gene position: 2680644-2679385 (Counterclockwise)

Preceding gene: 238894798

Following gene: 238894795

Centisome position: 51.07

GC content: 69.21

Gene sequence:

>1260_bases
ATGAGTGATACCGTCCGCCAGCAGGCGGAGAGAGAGGCGGTGGCCAGCCGGGTGATGGCGCGCGCCGACCAGCTGGCCGC
CCTCAGCGAAACCGCCGATGCCCTGACCCGGGTCTATCTGTCGCCCGAGCATCTGCAGGCCAACCAGCTGGTGGGGCAGT
GGATGCAGGCTGCCGGCATGATGGTGTGGCAGGACAGCGTCGGCAACATCTGCGGACGTTATGAAGGACAACAGGAGGGG
GCGCCGGCGGTGCTGCTGGGCTCTCATCTTGACACCGTGCGCAACGCCGGACGCTACGACGGCATGCTCGGCGTGCTGGC
GGCGATCGAGGTGGTCCAGCGTCTGCACCAGCAGGGGCGACGGCTGGCGAAGGCAATCGAGATCGTCGGCTTTGGCGATG
AAGAGGGCACCCGCTTTGGCATTACCCTGCTCGGCAGCCGCGGCGTCACCGGCACCTGGCCTGAAAGCTGGCTGTCACAG
TGCGATACCGACGGGGTGAGCGTCGCCCAGGCGCTGGTGAATGCCGGACTCGATCCGGCGCGGATCGCCCACGCGGCCCG
TCACCCGCGGGATATCGCCGCCTATCTGGAACTGCATATCGAGCAGGGGCCGTGCCTGGAGCAGGCGGGTCTGGCGCTCG
GCGTGGTGGAGGCGATTAACGGCGCCCGCCGCCTGACCTGCCGCTTTACCGGCGAAGCCGGCCATGCCGGCACGGTGCCG
ATGCTCCATCGTAAGGACGCGCTCGCCGCGGCGGCGGAATGGATGGGGCAGGTGGAAAGCCTGACCCGGCAGCGCGGTGG
CAACCTGGTGGCGACGGTCGGCACCCTGCGCTGTGCGCCGGGCGCGGTGAACGTGATACCGGGCGAGGTGCAGTTGACGC
TGGATATTCGCGGCCCGCAGGATGCGCCGCTGACGGCGCTGCTGGAGGAACTGCTGGGGCAGGCGCAGGCCATTGCCGGG
CGCCGCCAGCTGAGTTTCGCCGCGGAGGAGTATTATCGCATCGCAGCCACCGCCTGCGACAGTCACCTGCAGGCGGTGCT
GAGCGAGGCGGTGGTGGCGGTGCAGGGGCGTTCCCTGACGCTGCCGAGCGGCGCAGGGCATGATGCTATCGCCATCGCCG
AGCGCTGGCCATCGGCGATGCTGTTTGTGCGTTGCCTGGGGGGCGTCAGCCATCACCCGGCGGAGTCGGTCACCGCCGCC
GACGTCGGACTGGCTATCGACGCTTTCTCCCGGGCGGTAGAGAAGGTGGCCGACGCCTGA

Upstream 100 bases:

>100_bases
TCAGCGCGCTGGAAGCGGTCCTGAACTACCTCAGGTTCACCACCACTCAGGGCGCGGCGATGCAGGCGGCCTGGGATCAC
TATCGCACCGAGGCCATCCT

Downstream 100 bases:

>100_bases
TCGCGCCGGTTGCCGAGCCCCGGCTGGCGGCTTCACACCGCCAGCTGGTTGACCACCTCGGCGACGGAGGTGATGGCATG
GATGTTGCCGATCCCCGCGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSDTVRQQAEREAVASRVMARADQLAALSETADALTRVYLSPEHLQANQLVGQWMQAAGMMVWQDSVGNICGRYEGQQEG
APAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGRRLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQ
CDTDGVSVAQALVNAGLDPARIAHAARHPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLTCRFTGEAGHAGTVP
MLHRKDALAAAAEWMGQVESLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQDAPLTALLEELLGQAQAIAG
RRQLSFAAEEYYRIAATACDSHLQAVLSEAVVAVQGRSLTLPSGAGHDAIAIAERWPSAMLFVRCLGGVSHHPAESVTAA
DVGLAIDAFSRAVEKVADA

Sequences:

>Translated_419_residues
MSDTVRQQAEREAVASRVMARADQLAALSETADALTRVYLSPEHLQANQLVGQWMQAAGMMVWQDSVGNICGRYEGQQEG
APAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGRRLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQ
CDTDGVSVAQALVNAGLDPARIAHAARHPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLTCRFTGEAGHAGTVP
MLHRKDALAAAAEWMGQVESLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQDAPLTALLEELLGQAQAIAG
RRQLSFAAEEYYRIAATACDSHLQAVLSEAVVAVQGRSLTLPSGAGHDAIAIAERWPSAMLFVRCLGGVSHHPAESVTAA
DVGLAIDAFSRAVEKVADA
>Mature_418_residues
SDTVRQQAEREAVASRVMARADQLAALSETADALTRVYLSPEHLQANQLVGQWMQAAGMMVWQDSVGNICGRYEGQQEGA
PAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGRRLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQC
DTDGVSVAQALVNAGLDPARIAHAARHPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLTCRFTGEAGHAGTVPM
LHRKDALAAAAEWMGQVESLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQDAPLTALLEELLGQAQAIAGR
RQLSFAAEEYYRIAATACDSHLQAVLSEAVVAVQGRSLTLPSGAGHDAIAIAERWPSAMLFVRCLGGVSHHPAESVTAAD
VGLAIDAFSRAVEKVADA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=391, Percent_Identity=34.0153452685422, Blast_Score=219, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44287; Mature: 44156

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00758 ARGE_DAPE_CPG2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTVRQQAEREAVASRVMARADQLAALSETADALTRVYLSPEHLQANQLVGQWMQAAGM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
MVWQDSVGNICGRYEGQQEGAPAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGR
EEEHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQCDTDGVSVAQALVNAGLDPA
HHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHH
RIAHAARHPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLTCRFTGEAGHAGTVP
HHHHHHCCHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
MLHRKDALAAAAEWMGQVESLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHEECCCCCEECCCEEEEEEEECCCC
DAPLTALLEELLGQAQAIAGRRQLSFAAEEYYRIAATACDSHLQAVLSEAVVAVQGRSLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPSGAGHDAIAIAERWPSAMLFVRCLGGVSHHPAESVTAADVGLAIDAFSRAVEKVADA
CCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDTVRQQAEREAVASRVMARADQLAALSETADALTRVYLSPEHLQANQLVGQWMQAAGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
MVWQDSVGNICGRYEGQQEGAPAVLLGSHLDTVRNAGRYDGMLGVLAAIEVVQRLHQQGR
EEEHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
RLAKAIEIVGFGDEEGTRFGITLLGSRGVTGTWPESWLSQCDTDGVSVAQALVNAGLDPA
HHHHHHHHEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCHH
RIAHAARHPRDIAAYLELHIEQGPCLEQAGLALGVVEAINGARRLTCRFTGEAGHAGTVP
HHHHHHCCHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
MLHRKDALAAAAEWMGQVESLTRQRGGNLVATVGTLRCAPGAVNVIPGEVQLTLDIRGPQ
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHEECCCCCEECCCEEEEEEEECCCC
DAPLTALLEELLGQAQAIAGRRQLSFAAEEYYRIAATACDSHLQAVLSEAVVAVQGRSLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
LPSGAGHDAIAIAERWPSAMLFVRCLGGVSHHPAESVTAADVGLAIDAFSRAVEKVADA
CCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]