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The map label for this gene is sgcQ [C]

Identifier: 238894763

GI number: 238894763

Start: 2645399

End: 2646244

Strand: Reverse

Name: sgcQ [C]

Synonym: KP1_2771

Alternate gene names: 238894763

Gene position: 2646244-2645399 (Counterclockwise)

Preceding gene: 238894765

Following gene: 238894762

Centisome position: 50.42

GC content: 54.49

Gene sequence:

>846_bases
ATGGTTGCTATCTCAGCAGAAAAAACGAATGCAATACAAGCTATTTTTTCACGAAGCAAGGCTGTTATTGGTGTTATTCA
TTGCGACCCATTTCCTGGCTCGCCAAAATATCGAGGAAAATCAGTCTCGGATATTGTTGAACGTGCGCTTCGCGATGCTG
AAAATTATATTTCAGGCGGTGTTCATGGTCTGATTATTGAAAATCATGGCGATATTCCTTTCTCTAAACCTGAGGATATC
GGCCATGAAACCTCAGCGCTGATGGCGGTCATTACCGAGAAAGTTCGTGAACGTTTTGCTGTGCCGCTGGGCATTAACGT
TCTGGCTAACGCGGCGATCCCGGCAATGGCGATCGCCCTGGCGGGAGGCGCCGATTTCGTCCGCGTCAACCAGTGGGCCA
ACGCCTATATCGCCAACGAAGGATTTATAGAAGGGGCGGCCGCTAAGACGCTGCGCTACCGCAGTATGCTGCGCGCTGAA
CATATTCGCGTTTTTGCCGATAGCCACGTTAAGCACGGTAGCCATGCCATTGTCGCCGATCGTTCGATTCAGGAACTGAC
GCGCGATGTCGATTTCTTCGAGGCTGACGCGGTGATCGCCACCGGCCAGCGTACGGGCGATAGCGCCACGATGGCGGAAA
TTGACGAGATCCGCGCGGCGACGGAACTACCGCTCCTGGTGGGCTCCGGGGTGACACCGGCTAACGTGAAGCAGATCCTC
GGGCGGACTCAGGGGGTCATTGTGGCCAGTACAATGAAGGTCGATGGCGTCTGGTGGAACGATGTTGAGCTGGCCCGGGT
GAAACATTTTATGTCGGTCGCGCAGGCCGCGCTGGAGGAGGCATAA

Upstream 100 bases:

>100_bases
GCTCCTTTTTTCGGTATATCCGGAATGGACCAGGTTTCATCTACGGTAATATTACCAGTAACGTAAACACGCATAGTGTT
CCCTTAACAGGATGGATAAG

Downstream 100 bases:

>100_bases
TGGAAGCGTTTAGCGAACGCCTGCTGCGCGAACATCAACCGGCGTGGCAGGCGATGCAGCAGCACCCGTTTGTGACTGAT
ATCGAACAGGATCGTCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGGVHGLIIENHGDIPFSKPEDI
GHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIALAGGADFVRVNQWANAYIANEGFIEGAAAKTLRYRSMLRAE
HIRVFADSHVKHGSHAIVADRSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATELPLLVGSGVTPANVKQIL
GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA

Sequences:

>Translated_281_residues
MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGGVHGLIIENHGDIPFSKPEDI
GHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIALAGGADFVRVNQWANAYIANEGFIEGAAAKTLRYRSMLRAE
HIRVFADSHVKHGSHAIVADRSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATELPLLVGSGVTPANVKQIL
GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA
>Mature_281_residues
MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGGVHGLIIENHGDIPFSKPEDI
GHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIALAGGADFVRVNQWANAYIANEGFIEGAAAKTLRYRSMLRAE
HIRVFADSHVKHGSHAIVADRSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATELPLLVGSGVTPANVKQIL
GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=265, Percent_Identity=26.0377358490566, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115532828, Length=254, Percent_Identity=36.2204724409449, Blast_Score=174, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24659916, Length=258, Percent_Identity=34.1085271317829, Blast_Score=161, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 30194; Mature: 30194

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGG
CEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VHGLIIENHGDIPFSKPEDIGHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIAL
EEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
AGGADFVRVNQWANAYIANEGFIEGAAAKTLRYRSMLRAEHIRVFADSHVKHGSHAIVAD
CCCCCEEEEECHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEC
RSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATELPLLVGSGVTPANVKQIL
CHHHHHHHHCCHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA
CCCCCEEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVAISAEKTNAIQAIFSRSKAVIGVIHCDPFPGSPKYRGKSVSDIVERALRDAENYISGG
CEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
VHGLIIENHGDIPFSKPEDIGHETSALMAVITEKVRERFAVPLGINVLANAAIPAMAIAL
EEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
AGGADFVRVNQWANAYIANEGFIEGAAAKTLRYRSMLRAEHIRVFADSHVKHGSHAIVAD
CCCCCEEEEECHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEC
RSIQELTRDVDFFEADAVIATGQRTGDSATMAEIDEIRAATELPLLVGSGVTPANVKQIL
CHHHHHHHHCCHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
GRTQGVIVASTMKVDGVWWNDVELARVKHFMSVAQAALEEA
CCCCCEEEEEEEEECCEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]