Click here to switch to the map view.

The map label for this gene is ydiF [H]

Identifier: 238894740

GI number: 238894740

Start: 2622488

End: 2624080

Strand: Reverse

Name: ydiF [H]

Synonym: KP1_2747

Alternate gene names: 238894740

Gene position: 2624080-2622488 (Counterclockwise)

Preceding gene: 238894741

Following gene: 238894739

Centisome position: 50.0

GC content: 61.9

Gene sequence:

>1593_bases
GTGAGCAGCAAATTTATCGACGCCCATGAGGCGGCGCGGTGGGTCGCCAGCGGCGACACCGTCTGCACCGTCGGGATGAC
GCTTATCGGCGCGGCGGAGTCCATTTTAAGCGCCATCGAAGCGCGCTTTCTGACCGCGGGCGAACCGCGTGACCTGACGC
TACTGCATGCCGCAGGGCAAAGCGATCGCCAGCGCGGTATCCAGCACTTCGCCCATCCGGGTATGGTGACCCGCCTTATC
GGTTCGCACTGGGGCCTGGCGCCGCGCTGGATGGCGATGATCAACAACAACGAAGTGGAAGCCTGGTGCCTGCCGCAGGG
GCAGATCGTTCATCTCTATAGCGCGATGGCCGCCGGACTGCCGGGGCGGCTTTCCCCCGTCGGTCTCGGTACCTTTGTCG
ATCCGCGCATAGAGGGCGGAAGGATGAACGCCCGCACCCGCGAACGACCCAATCTGATCGAGCACGTCACGTTTCGCGGC
GACGAATATCTGTTTTATCCGGCTCTTCCTCTGGACGTGGTCATTGTGCGCGGCACCCATGCTGATGAAGACGGCAACCT
CACGACCGATGAAGAGGTGATGAAGCTGGAAGTCCTGCACGCCGTTCTCGCCGCCAGACGCTACGGGGCGAAGGTGCTGG
CGCAGGTGAAATATCGCGTAGCGAAAGGCTCGCTGCATCCGAAAAGCATCACCGTTCCCGGCAACCTGATCGACGCCATT
GTGGTGTGCGAAGAGCCGCAGACGGATCACCGCCAGACTTCAAGCTGGGCCTTCGACCCAGCGCTGTGCGGCGATATCCA
GCTGCCCGCCGCGCAGAATGCGCCGCTGCCGCTGGACCTGCGCAAGCTTATCGGGCGGATTGCCTGCCGCTATCTGACCC
CCGGCTGCGTCATCAATCTCGGCACCGGTATTCCCAATGACGTGATTGGCGCCATCATTCACGAGGAACAGCTCGGCGAG
CAGGTCACCATCACCGTCGAGTCAGGGATCTACGGCGGGCAGCAGGCGGGTGGCGTGGATTTTGGTATCGGCCGTAATCT
GAGCGCGATGATTAGCCACCAGGATCAAATGCTCTACTACAACGGCGCAGGGGTCGACATCACCTTTATGGGCGCCGGCG
AGATGGACCCGCACGGGCACGTCAATGCCACACGGCTCGGCGCATCCTGCCCCGGCGCGGGCGGTTTTATCGATATCACC
CAGAATGCCCGCCACGTCGTGTTCTGCTCCTCTTTTACCGCCAAGGGGCTGGAGATCGCCTGTGAACACGGGGCGCTGCA
TATCCGCCGCGAAGGCGAGGTGCGTAAATTCGTCGCCGGGGTAAACCAGATTTCTTACAACGGCGAACTGGCCCGCGCCA
AAGGACAAACCATGCATTATGTCACCGAACGGGCGGTTTTCGAACTGCGCCCGGAAGGACCGGTGCTGACGGAAATCGCC
CCCGGTATCGATCTTGAGCGCGACATCCTGGCGCATATGGATTTTCATCCGGCGATCGCCGCGGATCTTCAGGTTATGGA
CAGCCGATTGTTCGCCCCGCCGCCCTGCGGTCTCGCGGAACATCTGTCCCGGAATTCATCCTCTGACTCATAA

Upstream 100 bases:

>100_bases
CCCGTGCTTTACCGCGTACCCACAACGGCAAAGTGAGCAAACAGCAGCTCAAAACGCGTCTCGCAGAATCCATCATCACG
CTATCAACGGAGGATAAAAA

Downstream 100 bases:

>100_bases
GGAACGTTGCTATGAAACTTGCCAGTAAAACCGCCATTGTCACCGGCGCCGCACGCGGTATCGGCTTTGGCATTGCCCAG
GTGCTTGCGCGGGAAGGCGC

Product: bifunctional putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 529

Protein sequence:

>530_residues
MSSKFIDAHEAARWVASGDTVCTVGMTLIGAAESILSAIEARFLTAGEPRDLTLLHAAGQSDRQRGIQHFAHPGMVTRLI
GSHWGLAPRWMAMINNNEVEAWCLPQGQIVHLYSAMAAGLPGRLSPVGLGTFVDPRIEGGRMNARTRERPNLIEHVTFRG
DEYLFYPALPLDVVIVRGTHADEDGNLTTDEEVMKLEVLHAVLAARRYGAKVLAQVKYRVAKGSLHPKSITVPGNLIDAI
VVCEEPQTDHRQTSSWAFDPALCGDIQLPAAQNAPLPLDLRKLIGRIACRYLTPGCVINLGTGIPNDVIGAIIHEEQLGE
QVTITVESGIYGGQQAGGVDFGIGRNLSAMISHQDQMLYYNGAGVDITFMGAGEMDPHGHVNATRLGASCPGAGGFIDIT
QNARHVVFCSSFTAKGLEIACEHGALHIRREGEVRKFVAGVNQISYNGELARAKGQTMHYVTERAVFELRPEGPVLTEIA
PGIDLERDILAHMDFHPAIAADLQVMDSRLFAPPPCGLAEHLSRNSSSDS

Sequences:

>Translated_530_residues
MSSKFIDAHEAARWVASGDTVCTVGMTLIGAAESILSAIEARFLTAGEPRDLTLLHAAGQSDRQRGIQHFAHPGMVTRLI
GSHWGLAPRWMAMINNNEVEAWCLPQGQIVHLYSAMAAGLPGRLSPVGLGTFVDPRIEGGRMNARTRERPNLIEHVTFRG
DEYLFYPALPLDVVIVRGTHADEDGNLTTDEEVMKLEVLHAVLAARRYGAKVLAQVKYRVAKGSLHPKSITVPGNLIDAI
VVCEEPQTDHRQTSSWAFDPALCGDIQLPAAQNAPLPLDLRKLIGRIACRYLTPGCVINLGTGIPNDVIGAIIHEEQLGE
QVTITVESGIYGGQQAGGVDFGIGRNLSAMISHQDQMLYYNGAGVDITFMGAGEMDPHGHVNATRLGASCPGAGGFIDIT
QNARHVVFCSSFTAKGLEIACEHGALHIRREGEVRKFVAGVNQISYNGELARAKGQTMHYVTERAVFELRPEGPVLTEIA
PGIDLERDILAHMDFHPAIAADLQVMDSRLFAPPPCGLAEHLSRNSSSDS
>Mature_529_residues
SSKFIDAHEAARWVASGDTVCTVGMTLIGAAESILSAIEARFLTAGEPRDLTLLHAAGQSDRQRGIQHFAHPGMVTRLIG
SHWGLAPRWMAMINNNEVEAWCLPQGQIVHLYSAMAAGLPGRLSPVGLGTFVDPRIEGGRMNARTRERPNLIEHVTFRGD
EYLFYPALPLDVVIVRGTHADEDGNLTTDEEVMKLEVLHAVLAARRYGAKVLAQVKYRVAKGSLHPKSITVPGNLIDAIV
VCEEPQTDHRQTSSWAFDPALCGDIQLPAAQNAPLPLDLRKLIGRIACRYLTPGCVINLGTGIPNDVIGAIIHEEQLGEQ
VTITVESGIYGGQQAGGVDFGIGRNLSAMISHQDQMLYYNGAGVDITFMGAGEMDPHGHVNATRLGASCPGAGGFIDITQ
NARHVVFCSSFTAKGLEIACEHGALHIRREGEVRKFVAGVNQISYNGELARAKGQTMHYVTERAVFELRPEGPVLTEIAP
GIDLERDILAHMDFHPAIAADLQVMDSRLFAPPPCGLAEHLSRNSSSDS

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=433, Percent_Identity=22.4018475750577, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787985, Length=518, Percent_Identity=36.8725868725869, Blast_Score=351, Evalue=5e-98,
Organism=Escherichia coli, GI1788551, Length=247, Percent_Identity=27.9352226720648, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 57254; Mature: 57123

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKFIDAHEAARWVASGDTVCTVGMTLIGAAESILSAIEARFLTAGEPRDLTLLHAAGQ
CCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
SDRQRGIQHFAHPGMVTRLIGSHWGLAPRWMAMINNNEVEAWCLPQGQIVHLYSAMAAGL
CHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHEEECCCCEEEEECCCCCCHHHHHHHHCCC
PGRLSPVGLGTFVDPRIEGGRMNARTRERPNLIEHVTFRGDEYLFYPALPLDVVIVRGTH
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEECCCCEEEEEEECCC
ADEDGNLTTDEEVMKLEVLHAVLAARRYGAKVLAQVKYRVAKGSLHPKSITVPGNLIDAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEEE
VVCEEPQTDHRQTSSWAFDPALCGDIQLPAAQNAPLPLDLRKLIGRIACRYLTPGCVINL
EEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
GTGIPNDVIGAIIHEEQLGEQVTITVESGIYGGQQAGGVDFGIGRNLSAMISHQDQMLYY
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEE
NGAGVDITFMGAGEMDPHGHVNATRLGASCPGAGGFIDITQNARHVVFCSSFTAKGLEIA
CCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEE
CEHGALHIRREGEVRKFVAGVNQISYNGELARAKGQTMHYVTERAVFELRPEGPVLTEIA
ECCCEEEEEECCHHHHHHHHHHHEECCCCEECCCCCEEEHHHHCEEEEECCCCCEEEHHC
PGIDLERDILAHMDFHPAIAADLQVMDSRLFAPPPCGLAEHLSRNSSSDS
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
SSKFIDAHEAARWVASGDTVCTVGMTLIGAAESILSAIEARFLTAGEPRDLTLLHAAGQ
CCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
SDRQRGIQHFAHPGMVTRLIGSHWGLAPRWMAMINNNEVEAWCLPQGQIVHLYSAMAAGL
CHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHEEECCCCEEEEECCCCCCHHHHHHHHCCC
PGRLSPVGLGTFVDPRIEGGRMNARTRERPNLIEHVTFRGDEYLFYPALPLDVVIVRGTH
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHEEEECCCCEEEECCCCEEEEEEECCC
ADEDGNLTTDEEVMKLEVLHAVLAARRYGAKVLAQVKYRVAKGSLHPKSITVPGNLIDAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEEE
VVCEEPQTDHRQTSSWAFDPALCGDIQLPAAQNAPLPLDLRKLIGRIACRYLTPGCVINL
EEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
GTGIPNDVIGAIIHEEQLGEQVTITVESGIYGGQQAGGVDFGIGRNLSAMISHQDQMLYY
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHCCCCCEEEE
NGAGVDITFMGAGEMDPHGHVNATRLGASCPGAGGFIDITQNARHVVFCSSFTAKGLEIA
CCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCEEEE
CEHGALHIRREGEVRKFVAGVNQISYNGELARAKGQTMHYVTERAVFELRPEGPVLTEIA
ECCCEEEEEECCHHHHHHHHHHHEECCCCEECCCCCEEEHHHHCEEEEECCCCCEEEHHC
PGIDLERDILAHMDFHPAIAADLQVMDSRLFAPPPCGLAEHLSRNSSSDS
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]