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The map label for this gene is ygbK [C]

Identifier: 238894664

GI number: 238894664

Start: 2554390

End: 2555526

Strand: Direct

Name: ygbK [C]

Synonym: KP1_2669

Alternate gene names: 238894664

Gene position: 2554390-2555526 (Clockwise)

Preceding gene: 238894659

Following gene: 238894665

Centisome position: 48.67

GC content: 66.23

Gene sequence:

>1137_bases
GTGGCCTTCACCGCCGGACAGCCATCAACCGCCCGGGCATTAATTCTCAACAGCGACAGCAGGGCGATGACCGCCGCCGC
GGCGGCGGACAAGGTCGCCGCTCTGCTGCGCGGCGCGGCGACATTCGTCCCGCACTGGCAGGTAAAGAAGATCGACTCCA
CGCTGCGCGGTAATCCCGGCGGCGAACTGGAGGCAATGATGGCGGCGCAAGGCTGCCGGATGGCGGTGGTGGCCCCGGCT
TATCCGGCAGCCGGGCGGCATACCCGGGACGGGCGCTGCTATGTGCATGGCGTGCCCCTCGATCAGACCGAATTTGCCAG
CGATCCGAAAACGCCGGTGAGCCGGGCGGAGATTAGCGAAATTATCGCTATGCAGAGCCGTCTTCCCTGTCTGACCCTGA
ACGCTGGCCAGCTTCCGGCGGCATTAGCGACGGCGGGCGAGGAAAAGCGAGTGTTGATTGTCGACGCCTGGGAAGACAGC
CATCTGGACCAGGTGATCGACGCCGTTGCGCCCCATGCGCGGGAGACCCTGCTGGTCGGCTCGGCGGGTCTCTGCGAGGC
GCTGGCTCGCCGCCTGCGCCGCAGCGAGCAGGGCCCGCTGCTGGCGGTGGTCGGTTCGATGAGCGAGATGGCGCAGCGTC
AGGTTGCTGCGCTGCAGGTCCATTCCCGAGTACGGGTGATTGAAATTGATGTCGAACAGGCCTTTAGCGGATCGCCAAAG
GAGGAAGCTTCACGGATCGCCGGGGCGCTGCGCGAGGGCCAGCACTGCGTGGTGACCACCCGCCCGAATCACGCCGTCCG
GCAAGGGATTGAAGCCCGGTGCCGTGAACGCGGCCTCAGCCGCGCCGCCTACGGGGAGCACATCTGCGCCTGGCTTGCCG
ACGTCACGGCGCAGGCGGTGGCGCAGTCTTCCCCTGGCGCGCTGTATCTTTCCGGCGGCGATGTGGCCATCGCCGTCGCG
CACGCGCTCGGCGCCACAGGGTTTCAGATCCGCGGCCGGGTGGCGGAGTGCGTTCCATACGGGCATTTTCTCGGCGGCCG
CTGGTCGCGGCCGGTGATGACCAAAGCCGGAGGATTCGGCACCGACACCACGCTGTTACATGTTGTGAATTTTATTGAGG
AGAAACTGAGTGTCTAA

Upstream 100 bases:

>100_bases
AATGAACGACGGCAATAACAGAGTGCTAGTGCTGGCGGATGACTTTACCGGGGCCAATGACGCCGGGGTCAGCCTGGCGG
AGGCGGGTATGTCGGTGGAA

Downstream 100 bases:

>100_bases
GATGATTGCAGTGACAATGGGCGACCCGGCAGGGATTGGTCCGGAGATTATTATCAAATCCCTCGCCGAGGGGGCGCTGA
GCGGCGCGCCGGTGGTGGTG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAFTAGQPSTARALILNSDSRAMTAAAAADKVAALLRGAATFVPHWQVKKIDSTLRGNPGGELEAMMAAQGCRMAVVAPA
YPAAGRHTRDGRCYVHGVPLDQTEFASDPKTPVSRAEISEIIAMQSRLPCLTLNAGQLPAALATAGEEKRVLIVDAWEDS
HLDQVIDAVAPHARETLLVGSAGLCEALARRLRRSEQGPLLAVVGSMSEMAQRQVAALQVHSRVRVIEIDVEQAFSGSPK
EEASRIAGALREGQHCVVTTRPNHAVRQGIEARCRERGLSRAAYGEHICAWLADVTAQAVAQSSPGALYLSGGDVAIAVA
HALGATGFQIRGRVAECVPYGHFLGGRWSRPVMTKAGGFGTDTTLLHVVNFIEEKLSV

Sequences:

>Translated_378_residues
MAFTAGQPSTARALILNSDSRAMTAAAAADKVAALLRGAATFVPHWQVKKIDSTLRGNPGGELEAMMAAQGCRMAVVAPA
YPAAGRHTRDGRCYVHGVPLDQTEFASDPKTPVSRAEISEIIAMQSRLPCLTLNAGQLPAALATAGEEKRVLIVDAWEDS
HLDQVIDAVAPHARETLLVGSAGLCEALARRLRRSEQGPLLAVVGSMSEMAQRQVAALQVHSRVRVIEIDVEQAFSGSPK
EEASRIAGALREGQHCVVTTRPNHAVRQGIEARCRERGLSRAAYGEHICAWLADVTAQAVAQSSPGALYLSGGDVAIAVA
HALGATGFQIRGRVAECVPYGHFLGGRWSRPVMTKAGGFGTDTTLLHVVNFIEEKLSV
>Mature_377_residues
AFTAGQPSTARALILNSDSRAMTAAAAADKVAALLRGAATFVPHWQVKKIDSTLRGNPGGELEAMMAAQGCRMAVVAPAY
PAAGRHTRDGRCYVHGVPLDQTEFASDPKTPVSRAEISEIIAMQSRLPCLTLNAGQLPAALATAGEEKRVLIVDAWEDSH
LDQVIDAVAPHARETLLVGSAGLCEALARRLRRSEQGPLLAVVGSMSEMAQRQVAALQVHSRVRVIEIDVEQAFSGSPKE
EASRIAGALREGQHCVVTTRPNHAVRQGIEARCRERGLSRAAYGEHICAWLADVTAQAVAQSSPGALYLSGGDVAIAVAH
ALGATGFQIRGRVAECVPYGHFLGGRWSRPVMTKAGGFGTDTTLLHVVNFIEEKLSV

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 40059; Mature: 39928

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTAGQPSTARALILNSDSRAMTAAAAADKVAALLRGAATFVPHWQVKKIDSTLRGNPG
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
GELEAMMAAQGCRMAVVAPAYPAAGRHTRDGRCYVHGVPLDQTEFASDPKTPVSRAEISE
CCHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHH
IIAMQSRLPCLTLNAGQLPAALATAGEEKRVLIVDAWEDSHLDQVIDAVAPHARETLLVG
HHHHHHCCCEEEECCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHEEEEC
SAGLCEALARRLRRSEQGPLLAVVGSMSEMAQRQVAALQVHSRVRVIEIDVEQAFSGSPK
CCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCCCCH
EEASRIAGALREGQHCVVTTRPNHAVRQGIEARCRERGLSRAAYGEHICAWLADVTAQAV
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AQSSPGALYLSGGDVAIAVAHALGATGFQIRGRVAECVPYGHFLGGRWSRPVMTKAGGFG
HCCCCCEEEEECCCEEEHHHHHHCCCCEEECCCHHHHCCCHHHCCCCCCCCCCCCCCCCC
TDTTLLHVVNFIEEKLSV
CHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AFTAGQPSTARALILNSDSRAMTAAAAADKVAALLRGAATFVPHWQVKKIDSTLRGNPG
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
GELEAMMAAQGCRMAVVAPAYPAAGRHTRDGRCYVHGVPLDQTEFASDPKTPVSRAEISE
CCHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCHHHHHHH
IIAMQSRLPCLTLNAGQLPAALATAGEEKRVLIVDAWEDSHLDQVIDAVAPHARETLLVG
HHHHHHCCCEEEECCCCCCHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHEEEEC
SAGLCEALARRLRRSEQGPLLAVVGSMSEMAQRQVAALQVHSRVRVIEIDVEQAFSGSPK
CCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEHHHHCCCCCH
EEASRIAGALREGQHCVVTTRPNHAVRQGIEARCRERGLSRAAYGEHICAWLADVTAQAV
HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AQSSPGALYLSGGDVAIAVAHALGATGFQIRGRVAECVPYGHFLGGRWSRPVMTKAGGFG
HCCCCCEEEEECCCEEEHHHHHHCCCCEEECCCHHHHCCCHHHCCCCCCCCCCCCCCCCC
TDTTLLHVVNFIEEKLSV
CHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]