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The map label for this gene is ynfM [H]

Identifier: 238894594

GI number: 238894594

Start: 2488904

End: 2490154

Strand: Reverse

Name: ynfM [H]

Synonym: KP1_2595

Alternate gene names: 238894594

Gene position: 2490154-2488904 (Counterclockwise)

Preceding gene: 238894598

Following gene: 238894592

Centisome position: 47.44

GC content: 61.15

Gene sequence:

>1251_bases
GTGAGTCGTACAACAACCGTTGACACCGTGCCGGCGGGCGAGGTCAGCGTCGCTGGTGCATCCCGCCCGGATCCGTTTAT
TAAGCGTGGCACCCCGCAGTTTATGCGCGTCACTCTAGCGCTGTTCTCCGCCGGTCTGGCCACCTTTGCCCTGCTCTACT
GTGTGCAGCCGATCCTGCCGGTGCTGTCGAACGAGTTTGGCGTGTCGCCGGCCAGCAGCAGTATTTCGCTTTCAATTTCC
ACGGCGATGTTGGCGGTGGGCTTGCTGTTTACCGGCCCGCTGTCGGACGCTATAGGCCGCAAGCCGGTGATGGTCACCGC
CCTGCTGCTGGCCGCCTGCTGTTCACTGTTGTCGACTATGATGACCAGCTGGCACGGCATCCTGATTATGCGCGCGCTCA
TCGGCCTGTCACTGAGCGGCGTAGCGGCGGTCGGAATGACCTATCTGAGCGAGGAGATCCACCCCAGTTTCGTCGCCTTT
TCGATGGGACTCTATATCAGCGGCAACTCCATCGGCGGCATGAGCGGCCGCTTGCTGACCGGGGTCTTTACCGATTTCTT
CGGCTGGCGCGTGGCGCTGGCGGCGATCAGCGGCTTTGCGCTGGCCGCGGCGATTATGTTCTGGCGTATCCTGCCCGAGT
CGCGCCATTTCCGCCCGACCTCGCTGCGACCGAAAACGCTGCTGATTAACTTCCGTCTGCACTGGCGCGACCGTGGCCTG
CCGCTGCTGTTCGTCGAAGGTTTTCTGCTGATGGGCGCTTTTGTCACCCTGTTTAACTATATTGGCTACCGGCTGATGAT
GTCGCCGTGGGCGTTAAGCCAGGCGGTGGTAGGCCTGCTGTCGGTAGCTTATCTCACCGGGACCTGGAGTTCACCGAAGG
CAGGGGCCATGACCGTACGCTTTGGCCGCGGGCCGGTGATGCTTGGCTTTACAGCGGTGATGCTCTGCGGCCTGCTGCTG
ACGCTCTTTTCTTCCCTGTGGCTTATTTTCATCGGCATGCTGCTGTTTTCCGCTGGCTTCTTCGCCGCGCATTCCGTCGC
CAGCAGCTGGATTGGCCCACGCGCCCGCCGCGCCCGCGGTCAGGCATCATCGCTGTATTTGTTCAGCTATTATTTGGGTT
CAAGTCTTGCCGGGACGTTAGGCGGGGTATTCTGGCATCACTACGGCTGGAACGGCGTCGGTGGGTTTATCGCGCTGCTG
CTCCTTGCCGCGCTGTTGACCGGCACCTGCTTACATCAGCGACTGAAATAG

Upstream 100 bases:

>100_bases
ATATTAGACAGAATATTTACATTTTCATACCCTAAAAATGTGAGCTGAATGGTCACAACACTCTGTTGGTAAGCAGCAAC
TTCTACGCAAGGAATTCTCT

Downstream 100 bases:

>100_bases
TCGCGTGTGACGTGGCCTGCGGGCCACGTTTCACCACATGCCCATTATGGAAGACAAGCCCATCAGCTCTCTGACGGCAT
CAACGGACAGTAGTGCAATA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSRTTTVDTVPAGEVSVAGASRPDPFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSNEFGVSPASSSISLSIS
TAMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
SMGLYISGNSIGGMSGRLLTGVFTDFFGWRVALAAISGFALAAAIMFWRILPESRHFRPTSLRPKTLLINFRLHWRDRGL
PLLFVEGFLLMGAFVTLFNYIGYRLMMSPWALSQAVVGLLSVAYLTGTWSSPKAGAMTVRFGRGPVMLGFTAVMLCGLLL
TLFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARGQASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALL
LLAALLTGTCLHQRLK

Sequences:

>Translated_416_residues
MSRTTTVDTVPAGEVSVAGASRPDPFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSNEFGVSPASSSISLSIS
TAMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAF
SMGLYISGNSIGGMSGRLLTGVFTDFFGWRVALAAISGFALAAAIMFWRILPESRHFRPTSLRPKTLLINFRLHWRDRGL
PLLFVEGFLLMGAFVTLFNYIGYRLMMSPWALSQAVVGLLSVAYLTGTWSSPKAGAMTVRFGRGPVMLGFTAVMLCGLLL
TLFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARGQASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALL
LLAALLTGTCLHQRLK
>Mature_415_residues
SRTTTVDTVPAGEVSVAGASRPDPFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILPVLSNEFGVSPASSSISLSIST
AMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFS
MGLYISGNSIGGMSGRLLTGVFTDFFGWRVALAAISGFALAAAIMFWRILPESRHFRPTSLRPKTLLINFRLHWRDRGLP
LLFVEGFLLMGAFVTLFNYIGYRLMMSPWALSQAVVGLLSVAYLTGTWSSPKAGAMTVRFGRGPVMLGFTAVMLCGLLLT
LFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARGQASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALLL
LAALLTGTCLHQRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=416, Percent_Identity=86.0576923076923, Blast_Score=713, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44646; Mature: 44514

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTTTVDTVPAGEVSVAGASRPDPFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILP
CCCCCCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSNEFGVSPASSSISLSISTAMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTM
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCEEEECCCCCCCCCHHHH
GVFTDFFGWRVALAAISGFALAAAIMFWRILPESRHFRPTSLRPKTLLINFRLHWRDRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCC
PLLFVEGFLLMGAFVTLFNYIGYRLMMSPWALSQAVVGLLSVAYLTGTWSSPKAGAMTVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
FGRGPVMLGFTAVMLCGLLLTLFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
QASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALLLLAALLTGTCLHQRLK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRTTTVDTVPAGEVSVAGASRPDPFIKRGTPQFMRVTLALFSAGLATFALLYCVQPILP
CCCCCCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSNEFGVSPASSSISLSISTAMLAVGLLFTGPLSDAIGRKPVMVTALLLAACCSLLSTM
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
MTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLT
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCEEEECCCCCCCCCHHHH
GVFTDFFGWRVALAAISGFALAAAIMFWRILPESRHFRPTSLRPKTLLINFRLHWRDRGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCC
PLLFVEGFLLMGAFVTLFNYIGYRLMMSPWALSQAVVGLLSVAYLTGTWSSPKAGAMTVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
FGRGPVMLGFTAVMLCGLLLTLFSSLWLIFIGMLLFSAGFFAAHSVASSWIGPRARRARG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
QASSLYLFSYYLGSSLAGTLGGVFWHHYGWNGVGGFIALLLLAALLTGTCLHQRLK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]