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The map label for this gene is ydfO [H]

Identifier: 238894519

GI number: 238894519

Start: 2416131

End: 2416523

Strand: Reverse

Name: ydfO [H]

Synonym: KP1_2512

Alternate gene names: 238894519

Gene position: 2416523-2416131 (Counterclockwise)

Preceding gene: 238894520

Following gene: 238894517

Centisome position: 46.04

GC content: 55.47

Gene sequence:

>393_bases
ATGGAACTGCTGGTCAGGCTGGGTCATTTTTTTGAGCAAGCGCGTTCTGACGCCGACTATGCCACCTTCGCCAATGAACT
GCGTCGGCATCAGGTCTCCTACTACATCTATTTTGTCTCCACCGGCAATATGAATTTCGTAATGGCAAACGACGAGGTGG
TCTCGGTAAAAAGCGCCCGCGGGCTGCTGCGCGTTCGCGCTGAGGCCAGCCATTGTCTGACCAGGGCCGCCGTTATCCGC
CACTTTGCCCGGGCCATTAACTTTGAACAGTACTGCCGGGATCTCGCCAGCGCCGGGGTGTTTAAGTGGATCGTCGATCT
GGAAGAGGAGACCCGGCACTACTGGTCGAAGGATAATACGCTGTTATATAAAGAGTGCCTGATGCCCCCCTGA

Upstream 100 bases:

>100_bases
TATAACGCGCCTATATTATTAAAATGCGAATAAGTTATTTAGTGAATGGTTTCTGCCGCTATCGGCCAAAGCCGCACACA
GCGACACGATAAGGATCGAA

Downstream 100 bases:

>100_bases
GCCGGTCTCAGGGGGAGGCGGCGAGGGTCAGCCTTTAATCGCGGGTCTGCACCCAAAAGGCGTGGATCAGGCCAGGAATA
TAGCCCAGCAGGGTCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSARGLLRVRAEASHCLTRAAVIR
HFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNTLLYKECLMPP

Sequences:

>Translated_130_residues
MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSARGLLRVRAEASHCLTRAAVIR
HFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNTLLYKECLMPP
>Mature_130_residues
MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSARGLLRVRAEASHCLTRAAVIR
HFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNTLLYKECLMPP

Specific function: Unknown

COG id: COG5562

COG function: function code R; Phage envelope protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybcV and ycgX [H]

Homologues:

Organism=Escherichia coli, GI87081931, Length=130, Percent_Identity=34.6153846153846, Blast_Score=102, Evalue=7e-24,
Organism=Escherichia coli, GI87081758, Length=117, Percent_Identity=38.4615384615385, Blast_Score=98, Evalue=1e-22,
Organism=Escherichia coli, GI1787408, Length=125, Percent_Identity=34.4, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009833
- ProDom:   PD021249 [H]

Pfam domain/function: PF07166 DUF1398 [H]

EC number: NA

Molecular weight: Translated: 15188; Mature: 15188

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSAR
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCEEEHHHHH
GLLRVRAEASHCLTRAAVIRHFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCE
LLYKECLMPP
EEHHHHCCCC
>Mature Secondary Structure
MELLVRLGHFFEQARSDADYATFANELRRHQVSYYIYFVSTGNMNFVMANDEVVSVKSAR
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEEEEEECCEEEEEECCCEEEHHHHH
GLLRVRAEASHCLTRAAVIRHFARAINFEQYCRDLASAGVFKWIVDLEEETRHYWSKDNT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCE
LLYKECLMPP
EEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]