| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
Click here to switch to the map view.
The map label for this gene is 238894415
Identifier: 238894415
GI number: 238894415
Start: 2308066
End: 2310786
Strand: Direct
Name: 238894415
Synonym: KP1_2400
Alternate gene names: NA
Gene position: 2308066-2310786 (Clockwise)
Preceding gene: 238894414
Following gene: 238894416
Centisome position: 43.98
GC content: 58.14
Gene sequence:
>2721_bases TTGACGAGGGGACAATATCCGATGAGTAGCGTGAAATCGTTGTTGTTCAGCCATAACCACCACCTGCTTTCGGTGAAGGG ATGTGAAGCCGGGCTTGATGTGCTGGCCTTCGAGGGCGATGAAGCCCTGAGCCAGCCGTTCCGCTACCGTATTGAATTCA CCAGCGCAGACCATGCCATCAGCAAAGAGATGATGCTGATGAAGGCAGCCTCCCTGACGCTGCAGGCGCCGGTGGCTCAG GGCTTCGGCATCAATGTTCAGCAACCCGTGCGGGTGATCCAGGGCGTGGTGACGGGGTTTGAACGGCTCAGTACCTCCAG GGATGAAACGCACTACGCGCTGACGCTTCAGCCGCGCCTGGCGCTGCTTAACCGCTCGCACCAGAACGCCATTTACCAGG ACCAGTCCGTTCCGCAGATTGTGGAAAAAATCCTCCGCGAGCGCCACGGCCTGCGCGGTCAGGATTTTCTGTTCTCGCTG ACAAAAACGTATCCGCGACGCGAGCAGGTGATGCAGTACGGCGAGGATGACCTGCGCTTTATCACCCGGCTGCTGGGTGA GGTGGGGATCTGGTTTCGGTTTACCGCCGACACGCGGCTGCACATCGACGTCGCTGAGTTCTGCGACAGTCAGCAGGGCT ATGAGAAGGGGCTGACGTTGCCTTCGGTCCCGCCGTCAGGGCAGCAGTCGGCCGGGGTGGACGCGGTGTGGGAGATGGCA TGTCGCCACCGCGTCGTGGAGCAGCAGGTCAGTACCCGCGACTACAACTACCGCGAGGCGACGGCGGACATGAACGCGCA GGTGGATGTCACCCGCGGGGAGACCACTACCTTTGGTGAGGCTTACCACTGGGGAGATAACTACCTGACCGCGGGGAATG TCCATGACCGCCATCCGGCGCCGGAGTCCGGGGCGTTTTACGCCCGGCTTCGGCATGAGCGTTATCTTAACGGCCAGACC CGGATGCAGGCCACCACCAGCTGCCCGACGCTCTGCCCGGGACAGGTGCTGAAGGTCACCGGCGGAGAGGAGGTGGCCGG GGAGTTTGCTGATGGCGTGCTCGTCACGGCGATGCACAGCCACGCCCGGCGCGATGCCGACTTTGCGGTGGAGTTTGCCG GCATACCGGACAGCCCGGACGTCGGCTACCGGCCTGAGCCCGGCGCGCGTCCGGTGATGGCCGGGACGCTGCCGGCCCGC GTGACCAGCACCCGGGAAAACGACACCTACGGGCATATCGACAAACACGGACGCTACCGGGTGAATATGCTGTTTGACCG GGCGCGCTGGGAAACCGGTTTCGAGAGCCTGTGGGTCCGCCAGTCGCGGCCGTATGCCGGAGACACCTACGGCCTGCACC TGCCGCTGCTGGCCGGGACGGAGGTGGCGATTGGCTTTGAGGATGGTAACCCTGACCGGCCGTATATCGCGGGCGTGCTG CACGACTCGGCGCACGGCGACCACGTCACCATCCGCAATGACAAACGTAACGTCCTGCGCACCCCGGCCAACAACAAAAT CCGCCTCGACGATGAGCGCGGAAAAGAGCATATCAAGGTCTCGACGGAGTACGGCGGTAAGAGCCAGCTGAACCTCGGCC ATCTCGTGGATGCTGAAAAGCAGCCGCGCGGCGAAGGCTTTGAGCTGAGAACCGACAGCTGGGGCGCTATCCGGGCACAG AAAGGGATATTTATCAGCGCGGACGGACAGGTGCAGGCTCAGGGGCAGGTGCTGGATATGGAGCCGGCGGTCAGCAATCT GGCCGAAGCCCGGGAGCAGATGATGTCCATCTCCGGTGACGCGCAGAAGGCGACCGCGAACCCGGCCGATCTCCAGGCGC AAATTACCCTGCTGGAGCAGCAGCTGACAGACCTCAAAAAATCGGTACTGCTGGTCAGCGCGCCGGAGGGGATAGCGCTG ACCAGCGGGGAGCACCTGCAGGTCTCAGCCGGGCATAACCTGATTGCCACAGCCGGAAAGAATGCAGACGTCAGCGTGGT GAAAAATCTGTTCATCGGGGTGGGCAGTGCGCTGAGCGTGTTTGTGCGAAAGCTTGGGATCAGGCTGATAGCGAATCAGG GACCGGTACAGATGCAGGCGCAGAATGACCTGATGGCGCTGCTTGCCCGGAAGGAAATCAGCATTGTCAGCACGGAGGAT GAAATCAAAATCATCGCGAAGAAGAAGCTGACCCTGAATGGTGGGGGGAGTTATATCAGACTTGATGCAAATGCGATTGA ATCTGCTACTGCAGGCGAATATCGCACGAAAGCAGGATATTACGGGCGTCAGGAAAGCGCTTCTGAAAAAGTCAAAATGC CTGTATTTCCTGTAATGGAGCCTGGAGAGCACAGTTTACGTTTTGCTTTTCCAGGTGCGGATAGTGTCAGCCAGAGTATG AACTGGCTGATAAATCAGCCGTACAGTATTTCTGATAGCGCTGGAAAAATTCTGTCTACCGGAACAGTAGACACTTCAGG TCGTTTTCCCAAAATAGTACTTCCTGAAAGCGATACATTAAATTTAATCATTGGCCGAGAAACTTGGAGTAAAGAGGAGC TTTCTGTCTCATCAACTGAAGACGACAGTATGGAGGATTTTGAGGATGAAGCACCTGATGCCGATCTTCATTTAAGTGAA ATGGGTTTTGAAGATGATAGAACATCAGCATTGACTGAATCAATGATTTCAACTTTATTAAGTTTAACAAAGGATAGTTG A
Upstream 100 bases:
>100_bases CCGGCACTGAGTCAGCAGCTATTGAGCCATATGGCGGCGGGGCAGAAACCGCGCCAGGTGACGCTGGGGTATCACGAAGA GGAAGGCGTCGTGATGGCGT
Downstream 100 bases:
>100_bases TAGTGTTAAGTATGCTTATGAAACTTATGTTGAGTCTGGTTATCTTATTTTATAGCTTCGGTGTATATGCTGCATGCCTG AAAGAGGGGGATAAGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Vgr-Related Protein; VGR-Like Protein; VgrG Protein; Vgr Related Protein; Rhs Family Protein; Rhs Element Vgr Related Protein; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Protein VgrE; Vgr Protein; Rhs Accessory Genetic Element
Number of amino acids: Translated: 906; Mature: 905
Protein sequence:
>906_residues MTRGQYPMSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQ GFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSL TKTYPRREQVMQYGEDDLRFITRLLGEVGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMA CRHRVVEQQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQT RMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPAR VTSTRENDTYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVL HDSAHGDHVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQ KGIFISADGQVQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIAL TSGEHLQVSAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTED EIKIIAKKKLTLNGGGSYIRLDANAIESATAGEYRTKAGYYGRQESASEKVKMPVFPVMEPGEHSLRFAFPGADSVSQSM NWLINQPYSISDSAGKILSTGTVDTSGRFPKIVLPESDTLNLIIGRETWSKEELSVSSTEDDSMEDFEDEAPDADLHLSE MGFEDDRTSALTESMISTLLSLTKDS
Sequences:
>Translated_906_residues MTRGQYPMSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQ GFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSL TKTYPRREQVMQYGEDDLRFITRLLGEVGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMA CRHRVVEQQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQT RMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPAR VTSTRENDTYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVL HDSAHGDHVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQ KGIFISADGQVQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIAL TSGEHLQVSAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTED EIKIIAKKKLTLNGGGSYIRLDANAIESATAGEYRTKAGYYGRQESASEKVKMPVFPVMEPGEHSLRFAFPGADSVSQSM NWLINQPYSISDSAGKILSTGTVDTSGRFPKIVLPESDTLNLIIGRETWSKEELSVSSTEDDSMEDFEDEAPDADLHLSE MGFEDDRTSALTESMISTLLSLTKDS >Mature_905_residues TRGQYPMSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAISKEMMLMKAASLTLQAPVAQG FGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRLALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLT KTYPRREQVMQYGEDDLRFITRLLGEVGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMAC RHRVVEQQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPAPESGAFYARLRHERYLNGQTR MQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHSHARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARV TSTRENDTYGHIDKHGRYRVNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLH DSAHGDHVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEKQPRGEGFELRTDSWGAIRAQK GIFISADGQVQAQGQVLDMEPAVSNLAEAREQMMSISGDAQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALT SGEHLQVSAGHNLIATAGKNADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTEDE IKIIAKKKLTLNGGGSYIRLDANAIESATAGEYRTKAGYYGRQESASEKVKMPVFPVMEPGEHSLRFAFPGADSVSQSMN WLINQPYSISDSAGKILSTGTVDTSGRFPKIVLPESDTLNLIIGRETWSKEELSVSSTEDDSMEDFEDEAPDADLHLSEM GFEDDRTSALTESMISTLLSLTKDS
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99872; Mature: 99741
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRGQYPMSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAI CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHCCCEEEEEEECCCCHHH SKEMMLMKAASLTLQAPVAQGFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRL HHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH ALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRREQVMQYGEDDLRF HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHH ITRLLGEVGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMA HHHHHHCCCEEEEEECCCEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH CRHRVVEQQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPA HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCC PESGAFYARLRHERYLNGQTRMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHS CCCCCCHHHHHHHHHCCCCHHEEECCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEHHHH HARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTRENDTYGHIDKHGRYR HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEE VNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVL EEEEEEHHHHHCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEE HDSAHGDHVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEK ECCCCCCEEEEECCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCC QPRGEGFELRTDSWGAIRAQKGIFISADGQVQAQGQVLDMEPAVSNLAEAREQMMSISGD CCCCCCEEEECCCCCEEEECCCEEEECCCCEEECCEEEECCHHHHHHHHHHHHHHHCCCC AQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQVSAGHNLIATAGK CHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCEEEEECCCCEEEECCC NADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTED CCCHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHHHCCEEEEECCC EIKIIAKKKLTLNGGGSYIRLDANAIESATAGEYRTKAGYYGRQESASEKVKMPVFPVME CEEEEEEEEEEECCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGEHSLRFAFPGADSVSQSMNWLINQPYSISDSAGKILSTGTVDTSGRFPKIVLPESDTL CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCE NLIIGRETWSKEELSVSSTEDDSMEDFEDEAPDADLHLSEMGFEDDRTSALTESMISTLL EEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHHHH SLTKDS HHHCCC >Mature Secondary Structure TRGQYPMSSVKSLLFSHNHHLLSVKGCEAGLDVLAFEGDEALSQPFRYRIEFTSADHAI CCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHCCCEEEEEEECCCCHHH SKEMMLMKAASLTLQAPVAQGFGINVQQPVRVIQGVVTGFERLSTSRDETHYALTLQPRL HHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH ALLNRSHQNAIYQDQSVPQIVEKILRERHGLRGQDFLFSLTKTYPRREQVMQYGEDDLRF HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHCCCHHHHH ITRLLGEVGIWFRFTADTRLHIDVAEFCDSQQGYEKGLTLPSVPPSGQQSAGVDAVWEMA HHHHHHCCCEEEEEECCCEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHH CRHRVVEQQVSTRDYNYREATADMNAQVDVTRGETTTFGEAYHWGDNYLTAGNVHDRHPA HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEECCCCCCCCC PESGAFYARLRHERYLNGQTRMQATTSCPTLCPGQVLKVTGGEEVAGEFADGVLVTAMHS CCCCCCHHHHHHHHHCCCCHHEEECCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEHHHH HARRDADFAVEFAGIPDSPDVGYRPEPGARPVMAGTLPARVTSTRENDTYGHIDKHGRYR HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEE VNMLFDRARWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVL EEEEEEHHHHHCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEE HDSAHGDHVTIRNDKRNVLRTPANNKIRLDDERGKEHIKVSTEYGGKSQLNLGHLVDAEK ECCCCCCEEEEECCCCCEEECCCCCCEEECCCCCCCEEEEEECCCCCCCCCCHHCCCCCC QPRGEGFELRTDSWGAIRAQKGIFISADGQVQAQGQVLDMEPAVSNLAEAREQMMSISGD CCCCCCEEEECCCCCEEEECCCEEEECCCCEEECCEEEECCHHHHHHHHHHHHHHHCCCC AQKATANPADLQAQITLLEQQLTDLKKSVLLVSAPEGIALTSGEHLQVSAGHNLIATAGK CHHCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCEEEECCCEEEEECCCCEEEECCC NADVSVVKNLFIGVGSALSVFVRKLGIRLIANQGPVQMQAQNDLMALLARKEISIVSTED CCCHHHHHHHHHCCCHHHHHHHHHHCEEEEECCCCEEEECHHHHHHHHHHCCEEEEECCC EIKIIAKKKLTLNGGGSYIRLDANAIESATAGEYRTKAGYYGRQESASEKVKMPVFPVME CEEEEEEEEEEECCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGEHSLRFAFPGADSVSQSMNWLINQPYSISDSAGKILSTGTVDTSGRFPKIVLPESDTL CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCE NLIIGRETWSKEELSVSSTEDDSMEDFEDEAPDADLHLSEMGFEDDRTSALTESMISTLL EEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHHHH SLTKDS HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA