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The map label for this gene is ybiL [H]

Identifier: 238894306

GI number: 238894306

Start: 2194552

End: 2196837

Strand: Reverse

Name: ybiL [H]

Synonym: KP1_2284

Alternate gene names: 238894306

Gene position: 2196837-2194552 (Counterclockwise)

Preceding gene: 238894307

Following gene: 238894305

Centisome position: 41.86

GC content: 59.01

Gene sequence:

>2286_bases
ATGGAAAAAAACGCTTCTCTGCCTTTCGGCAGTTTCAACTCATTGGCATTGTTTACAGGTCTGTGTCTGGGAGCCTCGCC
GGCAGCAGGCATCGCAGCGGAAAATTCGGTCAAAAATAGTGAAGAGACGCTGGTAGTGGAAGCCGCTCCGCCTTCACTCT
ACTCCCCCGGCGCTTCCGCCGATCCCAAGTTCAATAAACCGCTGGTCGATACCACCCGCACCATCACCGTGATCCCGGAA
CAGGTGATTAAAGATCAGGGCGTCACCAACCTGACTGACGCCCTCAAAAACGTTCCCGGCGTCGGGGCGTTTTATGCCGG
GGAGAATGGCAGCTCAACCACCGGGGATGCCATCTTTATGCGCGGCGTGGATACCTCTAACAGCATCTATGTGGACGGCA
TTCGCGACATCGGTAGCGTGACGCGCGATACCTTCAATACCCAGCAGGTGGAAGTCATCAAAGGGCCCGCCGGCACGGAC
TATGGCCGCAGCGCGCCCTCCGGCTCGATCAATATGATCAGCAAGCAGCCGCGCCTTGACTCCGGGATCGACGGCTCGGC
CAGCATCGGCAGCGCCTGGTCGCGCCGGGGCACTCTCGACCTGAACCAGGCGTTTAGCGACAACGCTGCGTTCCGTCTGA
ACCTGATGGGGGAAAAAACGCATGACGCTGGTCGGGACCGCATTGAAAACGAACGCTATGGCATCGCACCGTCGCTGGCC
TTCGGCCTTGATACCCCAACTCGTCTGTATCTGAACTATCTGCACGTCCGGCAGAACAACACCCCGGATGGCGGGATCCC
TACCGTCGGCCTGCCGGGCTATTCGGCGCCTTCGCCGAAGTATGCCGCACTCAACTCCGCCGGGAAGGTCGATACCAGCA
ATTTCTATGGCACCGACTCCGATTACGATAAATCTACTACCGACAGCGGTACCCTGCGCTTCGAACACGATCTGACGGAG
AATACCACCGTGCGCAATACCACCCGCTGGTCGCGAGTGAAACAGGAGTATCTTTTGACCGCGGTGATGGGCGGCGCGAA
CAATATCACCGCCCCCGATATCAATGACGTCAACACCTGGAGCTGGTCGCGTCTGGTTAATACCAAAGATGTCAGCAACC
GTATTCTGACCAACCAGACCAATATCACCTCGACTTTCAATACTGGCTCGATAGGCCATGACGTCAGCGCCGGCGTGGAG
TTTACCCGGGAAAACCAGACCAACTATGGCGTTAACGCCAGGACCGCGCCGGCGGTGAATCTCTACCATCCGGTGAGCAA
CCTGTCGATTGGCGGGCTGGACAGAAACGGGGCGAACGCCAACGGCCAGACCGATACCTTCGGGATTTATGCCTTTGATA
CGCTGACGCTGACCGAGCGGATTGAGATCAACGGCGGGCTGCGTCTCGACAATTACCATACCAAATATGACAGCGCCACC
GCCTGCGGCGGCAGCGGACGCGGGGCTATCGCCTGCCCGCCCGGACAGTCGACCGGCAGCCCGGTCACCACTGTCGATAC
CGCTAAATCCGGCAATCTGGTTAACTGGAAAGCCGGGGCGCTGTACCGCTTAACCGAGCAGGGCAATGTCTACGTCAACT
ACGCCATCTCACAGCAGCCGCCGGGAGGCAGCAGCTTCGCCCTGGCCGCCAGCGGCAGCGGCAACAGCGCTAACCGGACC
GACTTTAAGCCACAGAAGGCGAAATCCAGCGAGCTGGGCACCAAGTGGCAAATCTTCGACAACCGTCTGCTGCTCAGCGC
GGCGTTATTCCGCACCGATATTGAAAACGAAGTGGCCGCCAACGATGACGGAACCTGGTCGCAGTACGGCAAAAAGCGCG
TGGAGGGGTATGAACTCTCCGCGACCGGAAACCTGACCCCGGACTGGACGATTATCGCCGGCTACACTCAGCAGCATGCG
ACAGTGACGGAGGGACAGAACGTTGCACAGGATGGATCTTCCGCCCTGGCCTACACCCCGAAACATGCCTTTACGCTGTG
GACGCAGTATCAGGCCACCAGCGATCTGTCCGTCGGCGGCGGTGTGCGCTATGTCGGAAGCCTGCGCCGGGGCAGCGATG
GTGCAGTCGGTACCCCGGATCACACCGAGGGCTACTGGGTTGCCGACGCCAAACTGGGCTATCGGGTCAACAGCAACCTC
GATCTGCAGCTCAATATGTATAACCTGTTTGATACCGATTACGTGGCCTCCATCAACAAGAGCGGCTATCGCTATCATCC
GGGCGAACCCCGGACCTTTATGCTGACGGCGAACGTCCATTTCTGA

Upstream 100 bases:

>100_bases
TTATAGAATCACACCGGGTCAGCGCAAGCCAGACGACGAATAACGTCGCTTTTGCGCGGTGTGATATGTGCTCATAACAA
AAAATAAGCCTGCATTTATC

Downstream 100 bases:

>100_bases
GTCTGCGCGTGGGGCCGTTGCGCCCCACCTTTTAGAGAGAACACCGCGATGATGTATCACATTCCTGACGTGCTATCGAC
AGACCAGGTGGCGGAATTTA

Product: catecholate siderophore receptor Fiu

Products: NA

Alternate protein names: Ferric iron uptake protein; TonB-dependent receptor fiu [H]

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MEKNASLPFGSFNSLALFTGLCLGASPAAGIAAENSVKNSEETLVVEAAPPSLYSPGASADPKFNKPLVDTTRTITVIPE
QVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIFMRGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTD
YGRSAPSGSINMISKQPRLDSGIDGSASIGSAWSRRGTLDLNQAFSDNAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA
FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTSNFYGTDSDYDKSTTDSGTLRFEHDLTE
NTTVRNTTRWSRVKQEYLLTAVMGGANNITAPDINDVNTWSWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVE
FTRENQTNYGVNARTAPAVNLYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERIEINGGLRLDNYHTKYDSAT
ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQPPGGSSFALAASGSGNSANRT
DFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAANDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHA
TVTEGQNVAQDGSSALAYTPKHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL
DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF

Sequences:

>Translated_761_residues
MEKNASLPFGSFNSLALFTGLCLGASPAAGIAAENSVKNSEETLVVEAAPPSLYSPGASADPKFNKPLVDTTRTITVIPE
QVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIFMRGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTD
YGRSAPSGSINMISKQPRLDSGIDGSASIGSAWSRRGTLDLNQAFSDNAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA
FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTSNFYGTDSDYDKSTTDSGTLRFEHDLTE
NTTVRNTTRWSRVKQEYLLTAVMGGANNITAPDINDVNTWSWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVE
FTRENQTNYGVNARTAPAVNLYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERIEINGGLRLDNYHTKYDSAT
ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQPPGGSSFALAASGSGNSANRT
DFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAANDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHA
TVTEGQNVAQDGSSALAYTPKHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL
DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF
>Mature_761_residues
MEKNASLPFGSFNSLALFTGLCLGASPAAGIAAENSVKNSEETLVVEAAPPSLYSPGASADPKFNKPLVDTTRTITVIPE
QVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIFMRGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTD
YGRSAPSGSINMISKQPRLDSGIDGSASIGSAWSRRGTLDLNQAFSDNAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA
FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTSNFYGTDSDYDKSTTDSGTLRFEHDLTE
NTTVRNTTRWSRVKQEYLLTAVMGGANNITAPDINDVNTWSWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVE
FTRENQTNYGVNARTAPAVNLYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERIEINGGLRLDNYHTKYDSAT
ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQPPGGSSFALAASGSGNSANRT
DFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAANDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHA
TVTEGQNVAQDGSSALAYTPKHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL
DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF

Specific function: Involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate. It derives its energy for transport by interacting with the trans-periplasmic membrane protein

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=761, Percent_Identity=77.0039421813403, Blast_Score=1214, Evalue=0.0,
Organism=Escherichia coli, GI1786344, Length=780, Percent_Identity=24.6153846153846, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1790743, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1787344, Length=266, Percent_Identity=27.4436090225564, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 81521; Mature: 81521

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNASLPFGSFNSLALFTGLCLGASPAAGIAAENSVKNSEETLVVEAAPPSLYSPGASA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
DPKFNKPLVDTTRTITVIPEQVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIFM
CCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEE
RGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTDYGRSAPSGSINMISKQPRLD
EECCCCCCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC
SGIDGSASIGSAWSRRGTLDLNQAFSDNAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA
CCCCCCCCCCCHHHCCCCEEHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCHHE
FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTSNFYGTDS
ECCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
DYDKSTTDSGTLRFEHDLTENTTVRNTTRWSRVKQEYLLTAVMGGANNITAPDINDVNTW
CCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
SWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVEFTRENQTNYGVNARTAPAVN
CHHHCCCCHHHCCCEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEE
LYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERIEINGGLRLDNYHTKYDSAT
EECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCC
ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQP
CCCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCCEEEEEEEECCC
PGGSSFALAASGSGNSANRTDFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
NDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHATVTEGQNVAQDGSSALAYTP
CCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCHHCCCCCEEEECC
KHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL
CCEEEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEECEEEEEECCCE
DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF
EEEEEEEEECCCHHHHHCCCCCCEECCCCCEEEEEEEEECC
>Mature Secondary Structure
MEKNASLPFGSFNSLALFTGLCLGASPAAGIAAENSVKNSEETLVVEAAPPSLYSPGASA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
DPKFNKPLVDTTRTITVIPEQVIKDQGVTNLTDALKNVPGVGAFYAGENGSSTTGDAIFM
CCCCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEE
RGVDTSNSIYVDGIRDIGSVTRDTFNTQQVEVIKGPAGTDYGRSAPSGSINMISKQPRLD
EECCCCCCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC
SGIDGSASIGSAWSRRGTLDLNQAFSDNAAFRLNLMGEKTHDAGRDRIENERYGIAPSLA
CCCCCCCCCCCHHHCCCCEEHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCHHE
FGLDTPTRLYLNYLHVRQNNTPDGGIPTVGLPGYSAPSPKYAALNSAGKVDTSNFYGTDS
ECCCCCHHEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
DYDKSTTDSGTLRFEHDLTENTTVRNTTRWSRVKQEYLLTAVMGGANNITAPDINDVNTW
CCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
SWSRLVNTKDVSNRILTNQTNITSTFNTGSIGHDVSAGVEFTRENQTNYGVNARTAPAVN
CHHHCCCCHHHCCCEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEE
LYHPVSNLSIGGLDRNGANANGQTDTFGIYAFDTLTLTERIEINGGLRLDNYHTKYDSAT
EECCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCC
ACGGSGRGAIACPPGQSTGSPVTTVDTAKSGNLVNWKAGALYRLTEQGNVYVNYAISQQP
CCCCCCCCEEECCCCCCCCCCEEEEECCCCCCEEEECCCEEEEEECCCCEEEEEEEECCC
PGGSSFALAASGSGNSANRTDFKPQKAKSSELGTKWQIFDNRLLLSAALFRTDIENEVAA
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
NDDGTWSQYGKKRVEGYELSATGNLTPDWTIIAGYTQQHATVTEGQNVAQDGSSALAYTP
CCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCHHCCCCCEEEECC
KHAFTLWTQYQATSDLSVGGGVRYVGSLRRGSDGAVGTPDHTEGYWVADAKLGYRVNSNL
CCEEEEEEEECCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEECEEEEEECCCE
DLQLNMYNLFDTDYVASINKSGYRYHPGEPRTFMLTANVHF
EEEEEEEEECCCHHHHHCCCCCCEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]