Click here to switch to the map view.

The map label for this gene is ydjX [H]

Identifier: 238894274

GI number: 238894274

Start: 2163689

End: 2164345

Strand: Reverse

Name: ydjX [H]

Synonym: KP1_2248

Alternate gene names: 238894274

Gene position: 2164345-2163689 (Counterclockwise)

Preceding gene: 238894275

Following gene: 238894273

Centisome position: 41.24

GC content: 63.01

Gene sequence:

>657_bases
GTGGCCACGCTGGCCGTTATCAGCCACCGCGTCGGTCTCCACGATCTGCTGACTCACCTGCATCTGCTTCAGGACACCCT
CCGCCATCAGGGCGCCTGGGGATATCTGGTCTATGCTGCGCTGTTTATCATTGCCACCCTGTGTCTGATCCCCGGCAGCC
TGCTGGTGATCGCCGGCGGGATGCTCTTCGGCCCGCTAACAGGCTCCTTGCTCTCGTTTGCCGCCGCCACCCTCGCCTCT
TCGCTGTCGTTTTTAATCGCCCGCTGGCTTGGACGCGATCTGCTGCAGCGCTATGTCGGCCATACCACCGTCTTTCAGGC
GATTGAGCGCGGTATCGCCCACAGCGGCTGCGATTTCCTGATCCTCACCCGCCTGGTGCCGCTCTTTCCCTACAATATTC
AGAATTACGCCTACGGCCTGACGGCGATCCGCTTCTGGCCCTTTACCCTGATCTCGGTCGTGACCACCCTGCCGGGTCTG
GTCATCTATTCGGTGATGGCCAGCGAACTGGCCCGCGAGGGGGTGACCCTCGCCTTCGCGCTCAAACTGAGCCTCGCCGG
CGGGCTGCTGTTTGCCCTGGTGCAGATAGGTAAACGGTTTGCCCGCGCCTGTCGCGTGGCGGCGTGCAGTGAGGGGGTGC
GCCATGACCCAACCTGA

Upstream 100 bases:

>100_bases
ACTTTTTGATGTCCACTGCGTCCAGACTGTACAGGAGCACCTCTCATGCAAAAGAAGCCGTCATCCGGCCATTGGTAAAG
GGCTGGGACTTCTCGCGCTG

Downstream 100 bases:

>100_bases
TCGCCGTCACCTGCGCCGCGCCCGGCTGGCCCTTGCCGTCGTGGTCGCCGCCGCTCTGGCCGCCTGGCTGTGGTTCCCTG
GCGGGCGTACCTTTCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYAALFIIATLCLIPGSLLVIAGGMLFGPLTGSLLSFAAATLAS
SLSFLIARWLGRDLLQRYVGHTTVFQAIERGIAHSGCDFLILTRLVPLFPYNIQNYAYGLTAIRFWPFTLISVVTTLPGL
VIYSVMASELAREGVTLAFALKLSLAGGLLFALVQIGKRFARACRVAACSEGVRHDPT

Sequences:

>Translated_218_residues
MATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYAALFIIATLCLIPGSLLVIAGGMLFGPLTGSLLSFAAATLAS
SLSFLIARWLGRDLLQRYVGHTTVFQAIERGIAHSGCDFLILTRLVPLFPYNIQNYAYGLTAIRFWPFTLISVVTTLPGL
VIYSVMASELAREGVTLAFALKLSLAGGLLFALVQIGKRFARACRVAACSEGVRHDPT
>Mature_217_residues
ATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYAALFIIATLCLIPGSLLVIAGGMLFGPLTGSLLSFAAATLASS
LSFLIARWLGRDLLQRYVGHTTVFQAIERGIAHSGCDFLILTRLVPLFPYNIQNYAYGLTAIRFWPFTLISVVTTLPGLV
IYSVMASELAREGVTLAFALKLSLAGGLLFALVQIGKRFARACRVAACSEGVRHDPT

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=209, Percent_Identity=66.0287081339713, Blast_Score=265, Evalue=3e-72,
Organism=Escherichia coli, GI1788049, Length=121, Percent_Identity=33.0578512396694, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23622; Mature: 23491

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYAALFIIATLCLIPGSLLVIAGG
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MLFGPLTGSLLSFAAATLASSLSFLIARWLGRDLLQRYVGHTTVFQAIERGIAHSGCDFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILTRLVPLFPYNIQNYAYGLTAIRFWPFTLISVVTTLPGLVIYSVMASELAREGVTLAFA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKLSLAGGLLFALVQIGKRFARACRVAACSEGVRHDPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATLAVISHRVGLHDLLTHLHLLQDTLRHQGAWGYLVYAALFIIATLCLIPGSLLVIAGG
CHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MLFGPLTGSLLSFAAATLASSLSFLIARWLGRDLLQRYVGHTTVFQAIERGIAHSGCDFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILTRLVPLFPYNIQNYAYGLTAIRFWPFTLISVVTTLPGLVIYSVMASELAREGVTLAFA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LKLSLAGGLLFALVQIGKRFARACRVAACSEGVRHDPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]