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The map label for this gene is ydjZ [H]

Identifier: 238894273

GI number: 238894273

Start: 2162992

End: 2163702

Strand: Reverse

Name: ydjZ [H]

Synonym: KP1_2247

Alternate gene names: 238894273

Gene position: 2163702-2162992 (Counterclockwise)

Preceding gene: 238894274

Following gene: 238894272

Centisome position: 41.22

GC content: 65.82

Gene sequence:

>711_bases
ATGACCCAACCTGATCGCCGTCACCTGCGCCGCGCCCGGCTGGCCCTTGCCGTCGTGGTCGCCGCCGCTCTGGCCGCCTG
GCTGTGGTTCCCTGGCGGGCGTACCTTTCTGCAGCAGAGTCTGACGGCGTTAGCCTCCCTGGATCCTCAGCAGGTCAGAG
GGTTTATCGCCGCCTGGGGGCCGCAGGCCGCGCTGGTCTCATTTGCGCTGATGATCCTCCAGGCGATCGTCGCTCCGCTG
CCGGCTTTCCTGATTACCCTGGCGAACGCCGCCCTGTTCGGCGCCTTCTGGGGCGGGGCGCTGTCGTGGTTCAGCGCCAT
GGTCGGGGCCGGGCTCTGCTTCTGCATCGCCAGAGCGCTGGGGCGCGAAGTGGTGGAGAAACTCACCGGCCGCGCGGTGC
TGCGCAGTGCCGACGGCTATTTCACCCGCTTTGGCCCGCAGACGATCCTGGTCTGCCGCCTGCTGCCGTTTGTCCCGTTT
GACCCGGTCAGCTATGCCGCCGGACTAACCTCGCTGCGCTTCTGGCCCTTTATGCTGGCCACCGGCGTGGGCCAGCTCCC
GGCGACTATCGTTTATTCCTGGGCCGGGAGTCTGCTCACCGGGGGCACCTTCTGGCTGGCCACCGGGCTTTCGCTGCTTT
TTGCCCTGGCGGTGGTCATCTCTATCGCCAAAAATATTTACCGTGAACGTCATAAGAGATCGTCGCCATGA

Upstream 100 bases:

>100_bases
AAACTGAGCCTCGCCGGCGGGCTGCTGTTTGCCCTGGTGCAGATAGGTAAACGGTTTGCCCGCGCCTGTCGCGTGGCGGC
GTGCAGTGAGGGGGTGCGCC

Downstream 100 bases:

>100_bases
GCTTACCCCCGCTGGATTCTGTCCCCCTGATCCTTCGTCCGCAGGCCTGGCTGCACCGCCGGCATTACGGCCAGGTGCTG
AGCCCCATTCGCTGGTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTQPDRRHLRRARLALAVVVAAALAAWLWFPGGRTFLQQSLTALASLDPQQVRGFIAAWGPQAALVSFALMILQAIVAPL
PAFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARALGREVVEKLTGRAVLRSADGYFTRFGPQTILVCRLLPFVPF
DPVSYAAGLTSLRFWPFMLATGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP

Sequences:

>Translated_236_residues
MTQPDRRHLRRARLALAVVVAAALAAWLWFPGGRTFLQQSLTALASLDPQQVRGFIAAWGPQAALVSFALMILQAIVAPL
PAFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARALGREVVEKLTGRAVLRSADGYFTRFGPQTILVCRLLPFVPF
DPVSYAAGLTSLRFWPFMLATGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP
>Mature_235_residues
TQPDRRHLRRARLALAVVVAAALAAWLWFPGGRTFLQQSLTALASLDPQQVRGFIAAWGPQAALVSFALMILQAIVAPLP
AFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARALGREVVEKLTGRAVLRSADGYFTRFGPQTILVCRLLPFVPFD
PVSYAAGLTSLRFWPFMLATGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=235, Percent_Identity=63.8297872340426, Blast_Score=298, Evalue=2e-82,
Organism=Escherichia coli, GI87081964, Length=187, Percent_Identity=29.4117647058824, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25455; Mature: 25324

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPDRRHLRRARLALAVVVAAALAAWLWFPGGRTFLQQSLTALASLDPQQVRGFIAAWG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
PQAALVSFALMILQAIVAPLPAFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREVVEKLTGRAVLRSADGYFTRFGPQTILVCRLLPFVPFDPVSYAAGLTSLRFWPFMLA
HHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQPDRRHLRRARLALAVVVAAALAAWLWFPGGRTFLQQSLTALASLDPQQVRGFIAAWG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
PQAALVSFALMILQAIVAPLPAFLITLANAALFGAFWGGALSWFSAMVGAGLCFCIARAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREVVEKLTGRAVLRSADGYFTRFGPQTILVCRLLPFVPFDPVSYAAGLTSLRFWPFMLA
HHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TGVGQLPATIVYSWAGSLLTGGTFWLATGLSLLFALAVVISIAKNIYRERHKRSSP
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]