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The map label for this gene is puuD [H]

Identifier: 238894057

GI number: 238894057

Start: 1957982

End: 1958758

Strand: Reverse

Name: puuD [H]

Synonym: KP1_2005

Alternate gene names: 238894057

Gene position: 1958758-1957982 (Counterclockwise)

Preceding gene: 238894060

Following gene: 238894056

Centisome position: 37.32

GC content: 57.4

Gene sequence:

>777_bases
GTGAGGGCGATCATGGAAAATATAATGTACAAGCCAGTTATTGGCGTCGTGATGTGTAGAAACAGGCTTAAGGGTCACCA
GACCCAGACCTTGCAAGAAAAGTACCTGAATGCAATTGTGAACGCCGGCGGACTGCCGATTGCCCTGCCGCATGCGCTGG
CGGAGCCGGAGCTACTGAACGCGGTCGTTGATAAACTGGACGGGATCTACCTGCCAGGCAGCCCCAGCAATGTGCAGCCG
CACCTTTATGGTGAAAACGGCGATGAGCCTGACGCCGACCCCGGGCGTGATCTTCTGAGCATGGCGCTGATTAACGCCGC
GCTCGAAAGGCGCATCCCCATTTTCGCCATCTGTCGTGGACTGCAGGAACTGGTTGTCGCCACCGGCGGGACTCTGTATC
GTCGTCTGTTCGAGCAGCCTGAGCTCCTTGAACATCGCGAAGATCCTGAACTGCCCGTCGAGCAGCAGTATGCGCCGTCC
CATCAGGTTGAGGTTCAGGAAGGAGGATTGCTGTCGCAATTGATACCGGGCTGCAACACGTTTTGGGTAAACTCGCTACA
TGGGCAAGGGGCAAAAACCCTCAGTCCGCAGCTGCGCGTGGAGGCGCGAGCGCCGGATGGACTGGTGGAAGCGGTCAGCG
TGAACGATCATCCTTTCGCGCTGGGCGTACAGTGGCATCCAGAATGGAACAGTAGCGAATACGCCCTGTCGCGTATGTTG
TTTGATGGTTTTATCACCGCCTGTCAGGGCCATCATGCTGAAAAGCGGCGGCGCTGA

Upstream 100 bases:

>100_bases
AAATTAAGTTTGCAAAGGGCTATTTCCACTGCTAGATTGAGAAAATATTGAACGATATGGCCGTTAAACCCGCTATAGCG
GTCATAATTTAGTCCACTTT

Downstream 100 bases:

>100_bases
CCACTACCGTTAAGGAAATGCAAATATGAGCGATGACGGACTGGCGCCAGGGAAACGTCTGTCAGAGATCCGCCAACAGC
TGGGTCTCTCACAGCGTCGT

Product: gamma-glutamyl-gamma-aminobutyrate hydrolase

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRAIMENIMYKPVIGVVMCRNRLKGHQTQTLQEKYLNAIVNAGGLPIALPHALAEPELLNAVVDKLDGIYLPGSPSNVQP
HLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVATGGTLYRRLFEQPELLEHREDPELPVEQQYAPS
HQVEVQEGGLLSQLIPGCNTFWVNSLHGQGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRML
FDGFITACQGHHAEKRRR

Sequences:

>Translated_258_residues
MRAIMENIMYKPVIGVVMCRNRLKGHQTQTLQEKYLNAIVNAGGLPIALPHALAEPELLNAVVDKLDGIYLPGSPSNVQP
HLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVATGGTLYRRLFEQPELLEHREDPELPVEQQYAPS
HQVEVQEGGLLSQLIPGCNTFWVNSLHGQGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRML
FDGFITACQGHHAEKRRR
>Mature_258_residues
MRAIMENIMYKPVIGVVMCRNRLKGHQTQTLQEKYLNAIVNAGGLPIALPHALAEPELLNAVVDKLDGIYLPGSPSNVQP
HLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRGLQELVVATGGTLYRRLFEQPELLEHREDPELPVEQQYAPS
HQVEVQEGGLLSQLIPGCNTFWVNSLHGQGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRML
FDGFITACQGHHAEKRRR

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=253, Percent_Identity=86.1660079051383, Blast_Score=452, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 28631; Mature: 28631

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAIMENIMYKPVIGVVMCRNRLKGHQTQTLQEKYLNAIVNAGGLPIALPHALAEPELLN
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCHHHCCHHHHH
AVVDKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRG
HHHHHHCCEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQELVVATGGTLYRRLFEQPELLEHREDPELPVEQQYAPSHQVEVQEGGLLSQLIPGCNT
HHHHHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCC
FWVNSLHGQGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRML
EEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHH
FDGFITACQGHHAEKRRR
HHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MRAIMENIMYKPVIGVVMCRNRLKGHQTQTLQEKYLNAIVNAGGLPIALPHALAEPELLN
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEECCHHHCCHHHHH
AVVDKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMALINAALERRIPIFAICRG
HHHHHHCCEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
LQELVVATGGTLYRRLFEQPELLEHREDPELPVEQQYAPSHQVEVQEGGLLSQLIPGCNT
HHHHHHHCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCC
FWVNSLHGQGAKTLSPQLRVEARAPDGLVEAVSVNDHPFALGVQWHPEWNSSEYALSRML
EEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHH
FDGFITACQGHHAEKRRR
HHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]