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The map label for this gene is puuR [H]

Identifier: 238894056

GI number: 238894056

Start: 1957399

End: 1957956

Strand: Reverse

Name: puuR [H]

Synonym: KP1_2004

Alternate gene names: 238894056

Gene position: 1957956-1957399 (Counterclockwise)

Preceding gene: 238894057

Following gene: 238894055

Centisome position: 37.3

GC content: 53.76

Gene sequence:

>558_bases
ATGAGCGATGACGGACTGGCGCCAGGGAAACGTCTGTCAGAGATCCGCCAACAGCTGGGTCTCTCACAGCGTCGTGCCGC
CGAACTGTCTGGGTTAACACATAGTGCCATCAGCACCATAGAGCAGGATAAAGTCAGTCCTGCCATCAGTACGCTGCAAA
AGCTGCTGAAAGTCTATGGGCTGTCGCTCTCGGAATTCTTTTCTGAACCCGAAAAGCCGGACGAACCCCAGGTGGTCATT
AATCAGGATGACCTGATTGAGATGGGAAGTCAGGGCGTTTCCATGAAGCTGGTTCATAACGGAAATCCGAACCGTACGCT
GGCGATGATTTTTGAAACTTACCAGCCTGGAACCACGACCGGGGAGAGGATTAAGCATCAGGGTGAGGAGATAGGCACCA
TACTGGAAGGTGAGATCGTGCTGACCATTAACGGTCAGTCGTACCACCTGGTGGCTGGACAGAGCTATGCCATTAATACC
GGCATTCCGCACAGCTTCAGCAACACCTCGGCAGGCATCTGCCGCATCATCAGTGCCCACACCCCCACCACATTCTGA

Upstream 100 bases:

>100_bases
GCCCTGTCGCGTATGTTGTTTGATGGTTTTATCACCGCCTGTCAGGGCCATCATGCTGAAAAGCGGCGGCGCTGACCACT
ACCGTTAAGGAAATGCAAAT

Downstream 100 bases:

>100_bases
TTATTTCGCCTGAACGAAGTTCAGGCTTACTTCAGGCCTGTCGCGACGGAAAATCTATTTTCGTCGCGGCGAAGAACTCG
TAGTAATAACGTCTGCGCCG

Product: DNA-binding transcriptional repressor PuuR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI
NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINT
GIPHSFSNTSAGICRIISAHTPTTF

Sequences:

>Translated_185_residues
MSDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVI
NQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINT
GIPHSFSNTSAGICRIISAHTPTTF
>Mature_184_residues
SDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVIN
QDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINTG
IPHSFSNTSAGICRIISAHTPTTF

Specific function: Represses puuD [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=185, Percent_Identity=97.8378378378378, Blast_Score=371, Evalue=1e-104,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 20049; Mature: 19918

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC
LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
CCHHHHHCCCCCCCCCEEEECCCHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCH
GERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
HHHHHHCHHHHCEEECCEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCCHHHEEEECC
TPTTF
CCCCC
>Mature Secondary Structure 
SDDGLAPGKRLSEIRQQLGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYG
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHC
LSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTT
CCHHHHHCCCCCCCCCEEEECCCHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCH
GERIKHQGEEIGTILEGEIVLTINGQSYHLVAGQSYAINTGIPHSFSNTSAGICRIISAH
HHHHHHCHHHHCEEECCEEEEEECCCEEEEEECCCEEECCCCCCCCCCCCCHHHEEEECC
TPTTF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]