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The map label for this gene is ycgG [H]

Identifier: 238894032

GI number: 238894032

Start: 1930042

End: 1931577

Strand: Reverse

Name: ycgG [H]

Synonym: KP1_1978

Alternate gene names: 238894032

Gene position: 1931577-1930042 (Counterclockwise)

Preceding gene: 238894033

Following gene: 238894027

Centisome position: 36.8

GC content: 53.58

Gene sequence:

>1536_bases
ATGAAAGAGATAAAGCGGCGAAATGCATGGATTGCCTTTTCTCTGGCACTGGTGGTATTTCTTGCTGGCGTGTTTGTCAT
TAACTGGCAATTGTGGCATTCAGACCAGGCCACCCATGTCGCCGCCGCCCGTCAGGCGGCGAAAAAGATCGCAGCCATTC
TGGATGAGGCTCGTGAAGCGACGGCCACGGCGCTGAACGTTAGCCGCAGTGGTTGCTCCGGCCAGGGTCAATTTCAGCTC
GGAACGGAAGCCGCCCTGCAGCCGCACCTGCGTACCATTCTGCTGATAAAAGATGGCCAGGTGTGGTGCTCGTCCCTGCC
CGGCAATCGGGTCCTGACGCTCAGCCCTGAGTCTTTGCCTGACGAACCTCTGCTGCTGCTCCCGGCCAGAATGATGGTCA
ATAAACGGCCGGTACTGATCTATCAGGCGCGCGTAGCGGCGATCCGGGTGATTGTCACTATCAGCGACATCCATCTGCGT
GATGCACTATATAGCGATACCGATAACAACGGGCTGGCACTCTGGGTGCAGAACCAAATGATTGCCAGATATGGCGATGT
TAAGCCGCTGGCTGCTGACCCACACCAGGGCGTCTTTACCTCACCTGCCTATCCATTTCGCATTACCTACCCTGATTCAC
TTTTCTTTAGCCCCGGCCGCTTAGTCCATAATGGCTCCGGTCTGTTGATCTTTATTTTCTCAGTTTCGCTGCTGTTTTAT
TTCCTGATGCGTAAATATCTCAATGTTTATACCTCTGAAGAGGAAAGACTGCGCTACGCCATCAATCAGGGCTATATCGT
TCCCTACTATCAGCCGCTGGTGAATGGGAAAACCGGAGAGATATACGGCGTGGAAATTCTCGCCCGCTGGCAAAACAGCA
CGACGCCATCGCGCTCGCCAGCGGAATTTATTCCGCTGGCCGAACGTACCGGCTTAATTATTCCCCTAACCCGCAGCCTG
ATGGCGCAGGTCAACGCGCAGATGAGACCACTCTTTAGTAAACTACCGGATGGGTTTCATATTGGCCTCAATATCAGCGC
GTCACACATTAACGCCCCAACGTTTATCGATGATTGCCTGCACTTTCAGCACGGTTTTGAGGGTAAAGCGGTGAAGCTGA
TGCTGGAGATCACTGAACAGGAACCGCTGTTGCTCAACGGGGTGGTTGTCGACAAACTCAATACATTGCACAATCGCGGT
TTTTCCATCGCCCTGGACGACTTTGGCACCGGCTATTCCGGGCTTTCCTATCTCCACGAGCTGGTTTTCGACTATATCAA
AATCGATCAGAGCTTTGTCGCCCGCGTGACCGGGGAGGCGCCGTCAAGCAAACTGCTGGACTGCGTGATAGAGATGGCCC
GGACGTTGTCACTGCGCATTATTGCCGAGGGCGTCGAAACCCAGGCCCAACTGGAATATCTTAATCGCCAGAATATTCAT
CTGCTGCAGGACTACTATTTCTGGAAGCCGATGCCCTACGTCGCGCTGGTGATGCTCCTGCTGAGCAAACCGAAGGCGCG
GATTATCGAACAATAA

Upstream 100 bases:

>100_bases
AATCATCGCGAAAGATTTCCCCCTTCTACGATCATTGAAAAGCCTTTAACGCCAGATGGACGGTTCCCTTTATGCCTAAT
TACCTTAGCACGCTAAATAA

Downstream 100 bases:

>100_bases
GCGGGCGCTCCCTAACCCGCTGGCAACCCTGACCGCATAAACGTTATAACGAGGTGAACGCGTTTAACGCATCCTGTCGG
GTCTCCTTAATGGCAAAGAT

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAREATATALNVSRSGCSGQGQFQL
GTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLSPESLPDEPLLLLPARMMVNKRPVLIYQARVAAIRVIVTISDIHLR
DALYSDTDNNGLALWVQNQMIARYGDVKPLAADPHQGVFTSPAYPFRITYPDSLFFSPGRLVHNGSGLLIFIFSVSLLFY
FLMRKYLNVYTSEEERLRYAINQGYIVPYYQPLVNGKTGEIYGVEILARWQNSTTPSRSPAEFIPLAERTGLIIPLTRSL
MAQVNAQMRPLFSKLPDGFHIGLNISASHINAPTFIDDCLHFQHGFEGKAVKLMLEITEQEPLLLNGVVVDKLNTLHNRG
FSIALDDFGTGYSGLSYLHELVFDYIKIDQSFVARVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQAQLEYLNRQNIH
LLQDYYFWKPMPYVALVMLLLSKPKARIIEQ

Sequences:

>Translated_511_residues
MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAREATATALNVSRSGCSGQGQFQL
GTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLSPESLPDEPLLLLPARMMVNKRPVLIYQARVAAIRVIVTISDIHLR
DALYSDTDNNGLALWVQNQMIARYGDVKPLAADPHQGVFTSPAYPFRITYPDSLFFSPGRLVHNGSGLLIFIFSVSLLFY
FLMRKYLNVYTSEEERLRYAINQGYIVPYYQPLVNGKTGEIYGVEILARWQNSTTPSRSPAEFIPLAERTGLIIPLTRSL
MAQVNAQMRPLFSKLPDGFHIGLNISASHINAPTFIDDCLHFQHGFEGKAVKLMLEITEQEPLLLNGVVVDKLNTLHNRG
FSIALDDFGTGYSGLSYLHELVFDYIKIDQSFVARVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQAQLEYLNRQNIH
LLQDYYFWKPMPYVALVMLLLSKPKARIIEQ
>Mature_511_residues
MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAREATATALNVSRSGCSGQGQFQL
GTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLSPESLPDEPLLLLPARMMVNKRPVLIYQARVAAIRVIVTISDIHLR
DALYSDTDNNGLALWVQNQMIARYGDVKPLAADPHQGVFTSPAYPFRITYPDSLFFSPGRLVHNGSGLLIFIFSVSLLFY
FLMRKYLNVYTSEEERLRYAINQGYIVPYYQPLVNGKTGEIYGVEILARWQNSTTPSRSPAEFIPLAERTGLIIPLTRSL
MAQVNAQMRPLFSKLPDGFHIGLNISASHINAPTFIDDCLHFQHGFEGKAVKLMLEITEQEPLLLNGVVVDKLNTLHNRG
FSIALDDFGTGYSGLSYLHELVFDYIKIDQSFVARVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQAQLEYLNRQNIH
LLQDYYFWKPMPYVALVMLLLSKPKARIIEQ

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=504, Percent_Identity=50.9920634920635, Blast_Score=509, Evalue=1e-145,
Organism=Escherichia coli, GI1786507, Length=238, Percent_Identity=38.655462184874, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI87081980, Length=504, Percent_Identity=30.3571428571429, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1788502, Length=482, Percent_Identity=26.5560165975104, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI87081921, Length=242, Percent_Identity=35.5371900826446, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1790496, Length=247, Percent_Identity=32.7935222672065, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI87081743, Length=285, Percent_Identity=32.280701754386, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1787541, Length=243, Percent_Identity=32.5102880658436, Blast_Score=122, Evalue=7e-29,
Organism=Escherichia coli, GI1787055, Length=241, Percent_Identity=31.5352697095436, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI226510982, Length=244, Percent_Identity=28.2786885245902, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788849, Length=246, Percent_Identity=26.8292682926829, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87082096, Length=239, Percent_Identity=29.2887029288703, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 57374; Mature: 57374

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAREA
CCCHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TATALNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLSPESLP
HHHHEECCCCCCCCCCCEEECCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
DEPLLLLPARMMVNKRPVLIYQARVAAIRVIVTISDIHLRDALYSDTDNNGLALWVQNQM
CCCEEEECHHHHCCCCCEEEEEEHEEEEEEEEEEECHHHHHHHHCCCCCCCEEEEEECCH
IARYGDVKPLAADPHQGVFTSPAYPFRITYPDSLFFSPGRLVHNGSGLLIFIFSVSLLFY
HHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHHH
FLMRKYLNVYTSEEERLRYAINQGYIVPYYQPLVNGKTGEIYGVEILARWQNSTTPSRSP
HHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC
AEFIPLAERTGLIIPLTRSLMAQVNAQMRPLFSKLPDGFHIGLNISASHINAPTFIDDCL
HHHCCCHHHCCEEEEHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHH
HFQHGFEGKAVKLMLEITEQEPLLLNGVVVDKLNTLHNRGFSIALDDFGTGYSGLSYLHE
HHHCCCCCCEEEEEEEECCCCCEEEECEEHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LVFDYIKIDQSFVARVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQAQLEYLNRQNIH
HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCE
LLQDYYFWKPMPYVALVMLLLSKPKARIIEQ
EEEHHHHCCCCHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MKEIKRRNAWIAFSLALVVFLAGVFVINWQLWHSDQATHVAAARQAAKKIAAILDEAREA
CCCHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TATALNVSRSGCSGQGQFQLGTEAALQPHLRTILLIKDGQVWCSSLPGNRVLTLSPESLP
HHHHEECCCCCCCCCCCEEECCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
DEPLLLLPARMMVNKRPVLIYQARVAAIRVIVTISDIHLRDALYSDTDNNGLALWVQNQM
CCCEEEECHHHHCCCCCEEEEEEHEEEEEEEEEEECHHHHHHHHCCCCCCCEEEEEECCH
IARYGDVKPLAADPHQGVFTSPAYPFRITYPDSLFFSPGRLVHNGSGLLIFIFSVSLLFY
HHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHHH
FLMRKYLNVYTSEEERLRYAINQGYIVPYYQPLVNGKTGEIYGVEILARWQNSTTPSRSP
HHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCCC
AEFIPLAERTGLIIPLTRSLMAQVNAQMRPLFSKLPDGFHIGLNISASHINAPTFIDDCL
HHHCCCHHHCCEEEEHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHH
HFQHGFEGKAVKLMLEITEQEPLLLNGVVVDKLNTLHNRGFSIALDDFGTGYSGLSYLHE
HHHCCCCCCEEEEEEEECCCCCEEEECEEHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LVFDYIKIDQSFVARVTGEAPSSKLLDCVIEMARTLSLRIIAEGVETQAQLEYLNRQNIH
HHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCE
LLQDYYFWKPMPYVALVMLLLSKPKARIIEQ
EEEHHHHCCCCHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]