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The map label for this gene is yccF [H]

Identifier: 238894017

GI number: 238894017

Start: 1916505

End: 1916951

Strand: Reverse

Name: yccF [H]

Synonym: KP1_1963

Alternate gene names: 238894017

Gene position: 1916951-1916505 (Counterclockwise)

Preceding gene: 238894019

Following gene: 238894016

Centisome position: 36.52

GC content: 55.03

Gene sequence:

>447_bases
ATGCGTACCATTCTGAATATTTTGAACTTTATCCTTGGCGGTTTCGCCACCACTCTAGGCTGGCTACTCGCCACCCTGGT
CAGCATCATTCTGATCGTCACGCTGCCGCTGACTCGTTCCTGCTGGGAAATCACTCGCCTTTCGTTATTTCCCTACGGTA
ACGAGGCGATTCATGTTGACGAGCTCGAGCCGGGGCGCAAAAACGGTCTACTGAACGCCGGCGGTACCGTTCTGAACATT
CTGTGGTTCATTTTTTTCGGCTGGTGGCTCTGCCTGATGCACATTTTCAGCGGTATAGCTCAGTGCCTGACTATCATAGG
CATCCCGGTGGGGATCGCGAATTTCAAAATCGCCGTCATCGCCCTCTGGCCGGTGGGTCGCCGGGTCGTTTCTGTGGAAA
CCGCGCGTGCTGCGCGTGAAGCCAATGCGCGTCGTCGCTTTCAGTAA

Upstream 100 bases:

>100_bases
GGATTGTTTTTCAGTTTAACCGCCCCGGACCAGGTGCTCCAGCGCAAAAAAACGTTACAATCATCAGGTCTTATTATCCA
CCGGGCAAAACCGAGGCTTT

Downstream 100 bases:

>100_bases
CCGAACGGAACACGGACATGATTAGCCCCCTGCTACGCCGCTACACCTGGAACAGCGCCTGGCTTTATAACGTACGAATT
TTTATCGCGCTCTGCGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRTILNILNFILGGFATTLGWLLATLVSIILIVTLPLTRSCWEITRLSLFPYGNEAIHVDELEPGRKNGLLNAGGTVLNI
LWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAVIALWPVGRRVVSVETARAAREANARRRFQ

Sequences:

>Translated_148_residues
MRTILNILNFILGGFATTLGWLLATLVSIILIVTLPLTRSCWEITRLSLFPYGNEAIHVDELEPGRKNGLLNAGGTVLNI
LWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAVIALWPVGRRVVSVETARAAREANARRRFQ
>Mature_148_residues
MRTILNILNFILGGFATTLGWLLATLVSIILIVTLPLTRSCWEITRLSLFPYGNEAIHVDELEPGRKNGLLNAGGTVLNI
LWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAVIALWPVGRRVVSVETARAAREANARRRFQ

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=148, Percent_Identity=86.4864864864865, Blast_Score=234, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16505; Mature: 16505

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILNILNFILGGFATTLGWLLATLVSIILIVTLPLTRSCWEITRLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEC
ELEPGRKNGLLNAGGTVLNILWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAVI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
ALWPVGRRVVSVETARAAREANARRRFQ
EECCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTILNILNFILGGFATTLGWLLATLVSIILIVTLPLTRSCWEITRLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEC
ELEPGRKNGLLNAGGTVLNILWFIFFGWWLCLMHIFSGIAQCLTIIGIPVGIANFKIAVI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
ALWPVGRRVVSVETARAAREANARRRFQ
EECCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]