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The map label for this gene is ycbZ [H]

Identifier: 238894010

GI number: 238894010

Start: 1908934

End: 1910691

Strand: Reverse

Name: ycbZ [H]

Synonym: KP1_1956

Alternate gene names: 238894010

Gene position: 1910691-1908934 (Counterclockwise)

Preceding gene: 238894012

Following gene: 238894009

Centisome position: 36.4

GC content: 59.16

Gene sequence:

>1758_bases
TTGACCATTACGAAACTGACCCGAACCGACCTTGCGCCTGATCTGGAAGCTTACCAGGCGCTGTTTGCTCAAGCTGAACT
TTCCCATCCGGCCCCCTCCCTCTCGGGCGATCTGCAGCCGCGTTTGTTCTATGGGCTTGAGCAGCTGCTGTACACGCCGG
CAGTCTCCTCCTTCATGCTGGTGAAAGCCCCTGAAGAGCCGGAATATCTGCAATGGCTGGCGGCTGAAACCCGGACTCTG
CACGAGCCTGCCGCACCGCTTTACGGCGTCCGCTATGAGGTAACCGACGCTCAGGTGACGCTCGCACCGGCGCAGGGCGC
TGAGGATAATTTCGCCAGCACTGCCCCGGTCGTGATGGCCGATTGGGTAGAAGCGGAACAGCTGTTTGGCTGCGTACGCC
AGTTTAACGGTGCAATCACCCTCCAGCCTGGGCTGGTCCATCAGGCCAACGGCGGCGTGCTTGTGCTTTCGCTACGTACA
CTGCTGGCGCAACCGCTGCTGTGGGTGCGTCTGAAAAATATGGTGACTCGTCAGCGCTTTGACTGGCTTTCTATGGATGA
ATCGCGTCCGCTGCCGGTCAGCATTCCCTCCATGCCGCTGAGTCTGAAAATCATCCTGGTGGGCGAACGCGAATCGCTGG
CCGATTTCCAGGAAATGGAGCCGGAGCTGGCTGCGCAGGCGATCTATAGCGAGTATGAAGACACTCTGCAGTTTGCTGAC
GCCGACACGCTAAAGGCCTGGTGCCAGTGGGTATGGCAGAATGCGCAGCAGCTGGCGCTGCCGGGCCCGGCAGCCGATGC
CTGGCCTCTGCTGATCGATGAGGGAACGCGCTATACCGGCGATCAGGAGACCCTGCCGCTCAGTCCGCTATGGATAACCC
GCCAGCTGCGGGAGGCCGCCGCCTTCTGCGAAGGAGAGGAGATTACCGGCGAAGCGATGCAGACCATGCTGGCGCGCCGG
GTATGGCGTGAAGGCTACCTGGCGGAGCGTATGCAGGATGAAATCCTGCAGGAACAGATCCTGATTGAAACCGAAGGCGA
ATGCGTCGGGCAGATCAACGCCCTGTCGGTGATCGAATTCCCCGGTCATCCACGCGCGTTCGGTGAACCTTCACGCATCA
GCTGCGTCGTGCACATTGGCGATGGCGAATTTATCGACGTCGAACGTAAAGCCGAGCTGGGCGGTAACATTCATGCGAAA
GGCATGATGATCATGCAGGCTTTTCTGATGTCCGAGCTGGAGCTGGAGCAGCAGCTTCCCTTCAGTGCTTCGCTGACCTT
TGAGCAGTCCTACAGTGAAGTGGATGGCGACAGCGCCTCCATGGCGGAACTCTGCGCCTTAATCAGCGCCCTGGCCAACG
TACCGATAAATCAGAGCATCGCGATCACCGGCTCCGTCGACCAGTTTGGTCGCGTGCAGCCGGTCGGCGGCCTGAACGAG
AAAATTGAAGGCTTCTTCACTATCTGTCAGCAGCGCGGTTTAACCGGCAAACAGGGAGTGATTATCCCTGCCGCCAACGT
TCGTCATCTCAGCCTGAGCCACGAGCTACGTCAGGCCGTTGCCGACAACCAGTTTGCTATCTGGGCCATTGACGATATTA
CCGAAGCGCTGCCGATGTTGACCCAGCTGATGTGGGACGGTGAAGGACAGACGCTGCGACAAACCATTCAGGAGCGGATA
GCGCAGGCGACCCAGCAAGAGACTCGCCATCGTTTTCCGTGGCCGCTACGCTGGTTAGGTGGGACAAGTTCTAACTGA

Upstream 100 bases:

>100_bases
TGCGACCGGGTAATCATCAGGGTAACCATAATCCTCCGTGTGCTCGGTCGCGGCATCAGGTATAATTGCGCGCTTTACAT
CTAACTAAAAAACAGCGACT

Downstream 100 bases:

>100_bases
TCGGACTTGTTCAGCTTACACGTGTTAGCTATCCTGCGTCCCGAACTTAAAATAAGGCTTACTGAAAACATGGTAGATAA
ACGCGAATCCTATACAAAAG

Product: putative ATP-dependent protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MTITKLTRTDLAPDLEAYQALFAQAELSHPAPSLSGDLQPRLFYGLEQLLYTPAVSSFMLVKAPEEPEYLQWLAAETRTL
HEPAAPLYGVRYEVTDAQVTLAPAQGAEDNFASTAPVVMADWVEAEQLFGCVRQFNGAITLQPGLVHQANGGVLVLSLRT
LLAQPLLWVRLKNMVTRQRFDWLSMDESRPLPVSIPSMPLSLKIILVGERESLADFQEMEPELAAQAIYSEYEDTLQFAD
ADTLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWITRQLREAAAFCEGEEITGEAMQTMLARR
VWREGYLAERMQDEILQEQILIETEGECVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAK
GMMIMQAFLMSELELEQQLPFSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNE
KIEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVADNQFAIWAIDDITEALPMLTQLMWDGEGQTLRQTIQERI
AQATQQETRHRFPWPLRWLGGTSSN

Sequences:

>Translated_585_residues
MTITKLTRTDLAPDLEAYQALFAQAELSHPAPSLSGDLQPRLFYGLEQLLYTPAVSSFMLVKAPEEPEYLQWLAAETRTL
HEPAAPLYGVRYEVTDAQVTLAPAQGAEDNFASTAPVVMADWVEAEQLFGCVRQFNGAITLQPGLVHQANGGVLVLSLRT
LLAQPLLWVRLKNMVTRQRFDWLSMDESRPLPVSIPSMPLSLKIILVGERESLADFQEMEPELAAQAIYSEYEDTLQFAD
ADTLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWITRQLREAAAFCEGEEITGEAMQTMLARR
VWREGYLAERMQDEILQEQILIETEGECVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAK
GMMIMQAFLMSELELEQQLPFSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNE
KIEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVADNQFAIWAIDDITEALPMLTQLMWDGEGQTLRQTIQERI
AQATQQETRHRFPWPLRWLGGTSSN
>Mature_584_residues
TITKLTRTDLAPDLEAYQALFAQAELSHPAPSLSGDLQPRLFYGLEQLLYTPAVSSFMLVKAPEEPEYLQWLAAETRTLH
EPAAPLYGVRYEVTDAQVTLAPAQGAEDNFASTAPVVMADWVEAEQLFGCVRQFNGAITLQPGLVHQANGGVLVLSLRTL
LAQPLLWVRLKNMVTRQRFDWLSMDESRPLPVSIPSMPLSLKIILVGERESLADFQEMEPELAAQAIYSEYEDTLQFADA
DTLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWITRQLREAAAFCEGEEITGEAMQTMLARRV
WREGYLAERMQDEILQEQILIETEGECVGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAKG
MMIMQAFLMSELELEQQLPFSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNEK
IEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVADNQFAIWAIDDITEALPMLTQLMWDGEGQTLRQTIQERIA
QATQQETRHRFPWPLRWLGGTSSN

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=581, Percent_Identity=74.0103270223752, Blast_Score=883, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.-

Molecular weight: Translated: 65024; Mature: 64893

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKLTRTDLAPDLEAYQALFAQAELSHPAPSLSGDLQPRLFYGLEQLLYTPAVSSFML
CCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEE
VKAPEEPEYLQWLAAETRTLHEPAAPLYGVRYEVTDAQVTLAPAQGAEDNFASTAPVVMA
EECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCHHH
DWVEAEQLFGCVRQFNGAITLQPGLVHQANGGVLVLSLRTLLAQPLLWVRLKNMVTRQRF
HHHHHHHHHHHHHHHCCEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DWLSMDESRPLPVSIPSMPLSLKIILVGERESLADFQEMEPELAAQAIYSEYEDTLQFAD
CCCCCCCCCCCCEECCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
ADTLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWITRQLREAA
HHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AFCEGEEITGEAMQTMLARRVWREGYLAERMQDEILQEQILIETEGECVGQINALSVIEF
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCCEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAKGMMIMQAFLMSELELEQQLP
CCCCCCCCCCCEEEEEEEECCCCEEEEECHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCCHH
KIEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVADNQFAIWAIDDITEALPML
HHHHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
TQLMWDGEGQTLRQTIQERIAQATQQETRHRFPWPLRWLGGTSSN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
TITKLTRTDLAPDLEAYQALFAQAELSHPAPSLSGDLQPRLFYGLEQLLYTPAVSSFML
CCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEE
VKAPEEPEYLQWLAAETRTLHEPAAPLYGVRYEVTDAQVTLAPAQGAEDNFASTAPVVMA
EECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCHHH
DWVEAEQLFGCVRQFNGAITLQPGLVHQANGGVLVLSLRTLLAQPLLWVRLKNMVTRQRF
HHHHHHHHHHHHHHHCCEEEECCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DWLSMDESRPLPVSIPSMPLSLKIILVGERESLADFQEMEPELAAQAIYSEYEDTLQFAD
CCCCCCCCCCCCEECCCCCEEEEEEEEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
ADTLKAWCQWVWQNAQQLALPGPAADAWPLLIDEGTRYTGDQETLPLSPLWITRQLREAA
HHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AFCEGEEITGEAMQTMLARRVWREGYLAERMQDEILQEQILIETEGECVGQINALSVIEF
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHCCCCEEEEEEC
PGHPRAFGEPSRISCVVHIGDGEFIDVERKAELGGNIHAKGMMIMQAFLMSELELEQQLP
CCCCCCCCCCCEEEEEEEECCCCEEEEECHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCC
FSASLTFEQSYSEVDGDSASMAELCALISALANVPINQSIAITGSVDQFGRVQPVGGLNE
CCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCCCCCHH
KIEGFFTICQQRGLTGKQGVIIPAANVRHLSLSHELRQAVADNQFAIWAIDDITEALPML
HHHHHHHHHHHCCCCCCCCEEEECCCCEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
TQLMWDGEGQTLRQTIQERIAQATQQETRHRFPWPLRWLGGTSSN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]