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The map label for this gene is ycaQ [H]

Identifier: 238893972

GI number: 238893972

Start: 1863122

End: 1864351

Strand: Direct

Name: ycaQ [H]

Synonym: KP1_1916

Alternate gene names: 238893972

Gene position: 1863122-1864351 (Clockwise)

Preceding gene: 238893971

Following gene: 238893973

Centisome position: 35.5

GC content: 62.11

Gene sequence:

>1230_bases
ATGTCGGTATTGCAACTATCGCTTAACGAGGCGCGCCACCTCCATCTCGCGGCGCAGGGGTTGTTAAAGAAGCCCCGACG
TCGCGCTCGCCCGAAAGACATTCTTTCCACCATCCAGCAGATGTCGCTGCTACAAATCGATACCATCAACGTGGTGGCCC
GCAGCCCCTACCTGGTGCTGTTCAGCCGTCTTGGCAGCTATCCGCAGCACTGGCTGGATGAGTCGCTGCGCAACGGCGAG
CTAATGGAATACTGGGCGCATGAAGCCTGCTTTCTGCCGCGCAGCGATTTCGCCCTGGTGCGCCATCGCATGTTGAATCC
CGACAATATGGGCTGGAAATACCATCGCGCATGGATGGAGGAGCATGCCGGGAGTATTGCCGAGCTGGTGGCGCATATCG
GGCAAAACGGCCCGGTTCGCTCGGCGGATTTTACCCACCCGCGCAAAGGCGCCAGCGGCTGGTGGGAGTGGAAACCGCAT
AAGCGCCACCTGGAAGGGCTGTTTACCGCCGGCGAAGTGATGGTGGTGGAGCGGCGCAATTTTCACCGCGTGTATGATCT
AACCCGGCGGGTGATGCCGGACTGGGACGACGAGCGCGACGCGCTCTCCCGCGAAGACGCAGAGGCCATTATGTTGCGCA
ATAGCGCCCGTAGTCTCGGCATCTTCCGCGCCCAGTGGCTGGCCGATTACTATCGCTTGCGCCAGCCGGCGCTACCGGGT
CTGCTGGCGGCCTGGCAGGAAGAGGGGCTGGTGGTGCCAGTTAACGTGGAAGCACTCGGCGAGATGTGGCTGCATCACGA
GGCGCTGGCGCAGCTGGAGACCGCGCCCGGCGGTAAGCTGACCGCCAGCCATAGCGCCGTGCTCTCGCCCTTCGACCCGG
TGGTCTGGGATCGGAAACGCGCTGAGCAGCTGTTCAACTTCAGCTATCGCCTGGAGTGTTATACCCCGGCGCCGAAGCGT
CAGTATGGCTACTTCGTACTGCCTCTGCTGCACCAGGGAAAACTGGTCGGGCGGATGGACAGTAAAATACATCGCAAAAG
CCGGGAGCTGGAGATCTTCGCTCTGTGGCTGGAGGAGGGGGTGAAGATCACCCGTGGTCTGGAGCAGGGGCTGCGCCGGG
CGATTAACGACTTCGCACGCTGGCAATCGGCAGAGCGGATCCTTTGCCGACGCCTGCCGGAAGGGCTGTTTGTCGGCCAG
GAGCAGGGGTGGGAAATCGACGCCGATTGA

Upstream 100 bases:

>100_bases
CGCACAGCGGTTGCTTGCGGACTTAGCGACGTTGGCGCAACGTTAACTGACGCGCCGGCTTTGCTCGCCGCTGTGCTGGA
ATTCCTGACGGAGAACCTGC

Downstream 100 bases:

>100_bases
TCCCGGCGCCTGCCTTCCTGTGATATGCTGCTGAGAAATCTATCCGGTCCATCAGGAGGAAACATGGATCACCGTTTACT
TGAAATCATCGCCTGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVLFSRLGSYPQHWLDESLRNGE
LMEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWMEEHAGSIAELVAHIGQNGPVRSADFTHPRKGASGWWEWKPH
KRHLEGLFTAGEVMVVERRNFHRVYDLTRRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRAQWLADYYRLRQPALPG
LLAAWQEEGLVVPVNVEALGEMWLHHEALAQLETAPGGKLTASHSAVLSPFDPVVWDRKRAEQLFNFSYRLECYTPAPKR
QYGYFVLPLLHQGKLVGRMDSKIHRKSRELEIFALWLEEGVKITRGLEQGLRRAINDFARWQSAERILCRRLPEGLFVGQ
EQGWEIDAD

Sequences:

>Translated_409_residues
MSVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVLFSRLGSYPQHWLDESLRNGE
LMEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWMEEHAGSIAELVAHIGQNGPVRSADFTHPRKGASGWWEWKPH
KRHLEGLFTAGEVMVVERRNFHRVYDLTRRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRAQWLADYYRLRQPALPG
LLAAWQEEGLVVPVNVEALGEMWLHHEALAQLETAPGGKLTASHSAVLSPFDPVVWDRKRAEQLFNFSYRLECYTPAPKR
QYGYFVLPLLHQGKLVGRMDSKIHRKSRELEIFALWLEEGVKITRGLEQGLRRAINDFARWQSAERILCRRLPEGLFVGQ
EQGWEIDAD
>Mature_408_residues
SVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVLFSRLGSYPQHWLDESLRNGEL
MEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWMEEHAGSIAELVAHIGQNGPVRSADFTHPRKGASGWWEWKPHK
RHLEGLFTAGEVMVVERRNFHRVYDLTRRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRAQWLADYYRLRQPALPGL
LAAWQEEGLVVPVNVEALGEMWLHHEALAQLETAPGGKLTASHSAVLSPFDPVVWDRKRAEQLFNFSYRLECYTPAPKRQ
YGYFVLPLLHQGKLVGRMDSKIHRKSRELEIFALWLEEGVKITRGLEQGLRRAINDFARWQSAERILCRRLPEGLFVGQE
QGWEIDAD

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=407, Percent_Identity=71.7444717444718, Blast_Score=608, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 47459; Mature: 47328

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVL
CCEEEEEHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCHHHH
FSRLGSYPQHWLDESLRNGELMEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWME
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
EHAGSIAELVAHIGQNGPVRSADFTHPRKGASGWWEWKPHKRHLEGLFTAGEVMVVERRN
HHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
FHRVYDLTRRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRAQWLADYYRLRQPALPG
HHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH
LLAAWQEEGLVVPVNVEALGEMWLHHEALAQLETAPGGKLTASHSAVLSPFDPVVWDRKR
HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHCCCCCCHHHCHHH
AEQLFNFSYRLECYTPAPKRQYGYFVLPLLHQGKLVGRMDSKIHRKSRELEIFALWLEEG
HHHHHCCEEEEEEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCEEEEEEHHHC
VKITRGLEQGLRRAINDFARWQSAERILCRRLPEGLFVGQEQGWEIDAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEECCC
>Mature Secondary Structure 
SVLQLSLNEARHLHLAAQGLLKKPRRRARPKDILSTIQQMSLLQIDTINVVARSPYLVL
CEEEEEHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHEEEEEHHHHCCCHHHH
FSRLGSYPQHWLDESLRNGELMEYWAHEACFLPRSDFALVRHRMLNPDNMGWKYHRAWME
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
EHAGSIAELVAHIGQNGPVRSADFTHPRKGASGWWEWKPHKRHLEGLFTAGEVMVVERRN
HHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
FHRVYDLTRRVMPDWDDERDALSREDAEAIMLRNSARSLGIFRAQWLADYYRLRQPALPG
HHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH
LLAAWQEEGLVVPVNVEALGEMWLHHEALAQLETAPGGKLTASHSAVLSPFDPVVWDRKR
HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHCCCCCCHHHCHHH
AEQLFNFSYRLECYTPAPKRQYGYFVLPLLHQGKLVGRMDSKIHRKSRELEIFALWLEEG
HHHHHCCEEEEEEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCCEEEEEEHHHC
VKITRGLEQGLRRAINDFARWQSAERILCRRLPEGLFVGQEQGWEIDAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]