Click here to switch to the map view.

The map label for this gene is ybiW [H]

Identifier: 238893883

GI number: 238893883

Start: 1756629

End: 1759061

Strand: Reverse

Name: ybiW [H]

Synonym: KP1_1816

Alternate gene names: 238893883

Gene position: 1759061-1756629 (Counterclockwise)

Preceding gene: 238893884

Following gene: 238893882

Centisome position: 33.52

GC content: 60.05

Gene sequence:

>2433_bases
ATGACTACCCTGAAGCTCAACACCCTCAGCGCCCGTATCCAGGCCCATAAAATGGCGCTGGTGCATATCGTCAAGCCGCC
GGTCTGTACCGAGCGCGCCCGCCACTATACGGAGATGTATCAGCGGCATCTCGATAAACCGATCCCGGTGCGCCGCGCGC
TGGCGCTGGCTCACCACCTGGCGGAGCGCACCATCTGGATCAAGCACGATGAGCTGATCGTCGGTAACCAGGCCAGCGAA
GTGCGCGCCGCGCCTATTTTCCCGGAATACACCGTCAGCTGGATTGAGAAAGAGATCGACGATCTCGCCGACCGCCCCGG
CGCCGGCTTCTCGGTCAGCGAGGAGAATAAACGCGTATTGCATGAAGTGTGCCCATGGTGGCGCGGCCAGACCGTACAAG
ACCGCTGCTACGGTATGTTCACCGATGAGCAAAAGGCGCTGCTCGCCACCGGCATTATTAAGGCGGAAGGCAATATGACC
TCCGGGGATGCTCACCTCGCGGTCAACTACCCCTTGCTGCTGGAGAAAGGCCTCGACGGGATGCGTGCGAAAGTCGCCGA
ACGCCGCTCGCGTATCAATTTGACAGTACTGGAAGACCTGCACGGCGAGCAGTTCCTGAAAGCGATTGATATCGTGCTGG
AAGCGGTCAGCGATCACAGCAAACGCTTCGCCGCGCTGGCGCGCGAGATGGCGACAGCAGAATCCCGCGAATCACGCCGC
CACGAACTGCTGACGATTGCCGAAAACTGCGACGTCATCGCCCATGAGCCGCCGAAAACCTTCTGGCAGGCGCTGCAGCT
GTGCTACTTCATTCAGCTTATCCTGCAGATTGAATCCAATGGCCATTCGGTATCCTTCGGCCGTATGGACCAGTACCTCT
ACCCGTACTACCGCCGCGACGTTGAGTTGCAACAGTCGCTGGATCGCGAACAGGCCATTGAGCTGCTGCACAGCTGCTGG
CTGAAGCTGCTGGAGGTCAATAAGATCCGTTCCGGCTCGCACTCCAAAGCCTCTGCCGGCAGCCCGCTATACCAGAACGT
CACCATCGGCGGCCAGAATCTGGTGGATGGTAAGCCGCAGGACGCGGTCAACCCGCTGTCCTATGCGATCCTGGAATCCT
GCGGTCGCCTGCGTTCTACCCAGCCGAACCTCAGCGTGCGCTACCACGCCGGGATGAGCAACGACTTCCTCGACGCCTGC
GTCCAGGTGATCCGCTGCGGTTTCGGCATGCCGGCGTTTAACAACGATGAAATCGTCATCCCGGAATTCATTAAGCTGGG
CATTGAGCCGCAGGACGCCTACGATTACGCGGCTATCGGCTGTATCGAAACCGCGGTCGGCGGTAAGTGGGGCTACCGCT
GTACCGGCATGAGCTTTATTAACTTCGCGCGGGTGATGCTGGCGACGCTGGAAGGCGGCCGCGATGCCACCAGCGGTCAG
GTGTTCCTGCCGCAGGAGCACGCCCTGTCGAAAGGCAACTTCGCTAACTTCGATCAGGTGCTGGCAGACTGGGACCGCCA
GATTCGTTACTACACCCGTAAATCCATCGAGATTGAGTACGTGGTCGATACCATGCTGGAAGAGAACGTCCACGATATTC
TCTGCTCGGCGCTAGTCGATGACTGCATCGAACGGGCGAAAAGCATTAAGCAAGGCGGCGCGAAGTATGACTGGGTTTCC
GGCCTGCAGGTGGGTATCGCCAACCTCGGCAACAGCCTCGCGGCGGTGAAAAAACTGGTCTTCGATCAGGGCGCCATCGG
CCAGCAGGAGCTGGCGAAGGCGCTGGCGGAAGATTTCGACGGTCTGACCCACGAGCAGCTGCGCCAGCGGTTGATCAACG
GCGCGCCGAAGTATGGTAACGATGATGACAGCGTCGACGAGTTGCTGGCGCGGGCCTACCAGACCTATATCGACGAGCTG
AAGCAGTATCACAACCCGCGCTATGGCCGCGGCCCGATTGGCGGCAATTATTACGCTGGCACCTCCTCTATTTCCGCTAA
CGTCCCGTTCGGCGCGCAGACCATGGCGACGCCGGATGGCCGTAAAGCGCATACCCCGCTGGCGGAGGGGGCCAGCCCGG
CCTCCGGTACCGATCATCTGGGGCCGACGGCGGTTATCAGTTCGGTGGGCAAGCTGCCGACCGGGGCGATCCTCGGCGGC
GTGCTGCTTAATCAGAAGCTGAATCCGTCAACGCTGGAGAACGAGTCCGATAAGCAGAAGCTGATGGTGCTGCTGCGCAC
TTTCTTCGAGGTGCACAAAGGCTGGCATATCCAGTACAACATCGTGTCGCGCGACACGCTGCTGGAAGCCAAGAAACATC
CTGACCAGTACCGCGATTTAGTGGTCCGCGTCGCTGGATACTCGGCGTTCTTCACCGCCCTGTCGCCGGATACCCAGGAC
GATATCATCGCCCGTACCGAACATACGCTGTAA

Upstream 100 bases:

>100_bases
ACCGCACCGGACAAACCGCTGGACGCTCCTGAGCTGCTCGTCTTCGCGCAGGATTATGCGCAAAGCAAGGGGCTAACGGC
GATATTACGAGGATAACCCT

Downstream 100 bases:

>100_bases
TCCTTCGTGCCCGCTGGCGCTATGCTTAGCGGGCCAACCCTGTTCTGCAGGCCGGAAAAGACATGCCCTTCCGGCATTTT
CTGAATGCCTGAACTTTCAT

Product: putative formate acetyltransferase 3

Products: NA

Alternate protein names: Pyruvate formate-lyase 3 [H]

Number of amino acids: Translated: 810; Mature: 809

Protein sequence:

>810_residues
MTTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQRHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASE
VRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMT
SGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRR
HELLTIAENCDVIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHSCW
LKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGKPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDAC
VQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQ
VFLPQEHALSKGNFANFDQVLADWDRQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVS
GLQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFDGLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDEL
KQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGG
VLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQD
DIIARTEHTL

Sequences:

>Translated_810_residues
MTTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQRHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASE
VRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMT
SGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRR
HELLTIAENCDVIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHSCW
LKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGKPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDAC
VQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQ
VFLPQEHALSKGNFANFDQVLADWDRQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVS
GLQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFDGLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDEL
KQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGG
VLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQD
DIIARTEHTL
>Mature_809_residues
TTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQRHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEV
RAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTS
GDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRRH
ELLTIAENCDVIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHSCWL
KLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGKPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACV
QVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQV
FLPQEHALSKGNFANFDQVLADWDRQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSG
LQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFDGLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDELK
QYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGGV
LLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQDD
IIARTEHTL

Specific function: Glucose metabolism (nonoxidative conversion). [C]

COG id: COG1882

COG function: function code C; Pyruvate-formate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 pyruvate formate lyase domain [H]

Homologues:

Organism=Escherichia coli, GI1787044, Length=810, Percent_Identity=92.7160493827161, Blast_Score=1585, Evalue=0.0,
Organism=Escherichia coli, GI1790388, Length=806, Percent_Identity=37.5930521091811, Blast_Score=478, Evalue=1e-136,
Organism=Escherichia coli, GI1787131, Length=566, Percent_Identity=25.9717314487633, Blast_Score=173, Evalue=4e-44,
Organism=Escherichia coli, GI48994926, Length=594, Percent_Identity=27.4410774410774, Blast_Score=173, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR004184
- InterPro:   IPR010098 [H]

Pfam domain/function: PF01228 Gly_radical; PF02901 PFL [H]

EC number: =2.3.1.54 [H]

Molecular weight: Translated: 90339; Mature: 90207

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS00850 GLY_RADICAL_1 ; PS51149 GLY_RADICAL_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQRHLDKPIPVRRALALAHHL
CCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVL
HHCEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
HEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDG
HHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHEEEECCCCCCCCCEEEECCHHHHHCCCCH
MRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRR
HHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELLTIAENCDVIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD
HHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
VELQQSLDREQAIELLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGKPQ
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEC
PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQ
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCE
VFLPQEHALSKGNFANFDQVLADWDRQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD
EECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH
DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDELKQYHNPRYGRGPIGGNYYAG
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC
TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
VLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCHHHHHH
VVRVAGYSAFFTALSPDTQDDIIARTEHTL
HHHHHCHHHHHHHCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
TTLKLNTLSARIQAHKMALVHIVKPPVCTERARHYTEMYQRHLDKPIPVRRALALAHHL
CEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEENKRVL
HHCEEEEEECCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
HEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDG
HHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHEEEECCCCCCCCCEEEECCHHHHHCCCCH
MRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLEAVSDHSKRFAALAREMATAESRESRR
HHHHHHHHHHCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HELLTIAENCDVIAHEPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRD
HHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
VELQQSLDREQAIELLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGKPQ
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
DAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVI
CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEC
PEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQ
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCE
VFLPQEHALSKGNFANFDQVLADWDRQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVD
EECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHH
DCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGAIGQQELAKALAEDFD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GLTHEQLRQRLINGAPKYGNDDDSVDELLARAYQTYIDELKQYHNPRYGRGPIGGNYYAG
CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC
TSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
VLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRDTLLEAKKHPDQYRDL
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCCCHHHHHH
VVRVAGYSAFFTALSPDTQDDIIARTEHTL
HHHHHCHHHHHHHCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]