Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 238893704

GI number: 238893704

Start: 1566010

End: 1566327

Strand: Reverse

Name: ybeB [H]

Synonym: KP1_1624

Alternate gene names: 238893704

Gene position: 1566327-1566010 (Counterclockwise)

Preceding gene: 238893705

Following gene: 238893703

Centisome position: 29.84

GC content: 55.66

Gene sequence:

>318_bases
TTGCAGGGTAAAGCACTCCAGGATTTTGTTATCGACAAAATTGATGACCTGAAAGGTCAGGACATCGTTGCCATTGATGT
ACATGGCAAATCCAGCATCACCGATTGCATGATTATCTGCACCGGCACCTCCACGCGTCATGTGATGTCTATCGCCGACC
ACGTGGTTCAGGAGTCCCGCGCCGCCGGCATGCTGCCGCTGGGCGTTGAAGGGGAAGCCGCCGCCGACTGGATCGTCGTC
GACCTCGGCGACGTGATGGTCCACGTCATGCAGGAAGAGAGCCGTCGTCTGTACGAGCTGGAAAAACTCTGGAGTTAA

Upstream 100 bases:

>100_bases
GAACGCCTGCCGACAGACATTTCACCCGACTTTTTCATCAGTTCAGGTATACTGTCAGGCTCTTTATGATTATCAATCTT
CACGCACCCAGGGGGAACAC

Downstream 100 bases:

>100_bases
TGCGTGAAGTTGCAGCTGGTGGCCGTTGGCACCAAAATGCCGGACTGGGTACAGACCGGCTTTAGCGAGTATCTGCGCCG
TTTTCCCAAAGATATGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESRAAGMLPLGVEGEAAADWIVV
DLGDVMVHVMQEESRRLYELEKLWS

Sequences:

>Translated_105_residues
MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESRAAGMLPLGVEGEAAADWIVV
DLGDVMVHVMQEESRRLYELEKLWS
>Mature_105_residues
MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESRAAGMLPLGVEGEAAADWIVV
DLGDVMVHVMQEESRRLYELEKLWS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=35.6435643564356, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=92.3809523809524, Blast_Score=200, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 11568; Mature: 11568

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
AAGMLPLGVEGEAAADWIVVDLGDVMVHVMQEESRRLYELEKLWS
CCCCCEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGKALQDFVIDKIDDLKGQDIVAIDVHGKSSITDCMIICTGTSTRHVMSIADHVVQESR
CCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH
AAGMLPLGVEGEAAADWIVVDLGDVMVHVMQEESRRLYELEKLWS
CCCCCEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]