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The map label for this gene is amaB [H]

Identifier: 238893595

GI number: 238893595

Start: 1448469

End: 1449737

Strand: Direct

Name: amaB [H]

Synonym: KP1_1508

Alternate gene names: 238893595

Gene position: 1448469-1449737 (Clockwise)

Preceding gene: 238893594

Following gene: 238893597

Centisome position: 27.6

GC content: 64.7

Gene sequence:

>1269_bases
ATGAGCAGTGATGTACTTTTTACCCCCGCGACCGACACCACCGGCTGGCGCATCAATGGCGACCGCCTGTGGGCGTCGTT
AATGGATCTCGCGCAGATCGGCGCCACGCCGAAGGGCGGCTGCCGCCGTCTAACCCTCACCGACCTCGACCGCCAGGGGC
GGGACAAGGTAATAGGCTGGGCGCGGGAGGCCGGGATGAGCGTCACCATCGATAAAATCGGCAATGTGTTTATGCGCCGG
GAAGGCCGCAACCCCGGCCTGCCGCCCATCGTCTCCGGCAGCCATATCGACACTCAGCCCACCGGCGGCAAATTTGACGG
CAACTACGGCGTGCTGGCGGCGCTGGAGGTGGTGCGCACGCTCAACGATCTGCAGATTGCCACCGAGGCGCCGATTGAGG
TGGTGTTCTGGACCAACGAAGAGGGGTCGCGCTTTGTGCCGGTGATGATGGGCTCCGGGGTCTTTGCCGGCGTCTTCCCG
CTGGAGGAGACCTGGGCCGTCACGGATAAAGAGGGCATCAGCGTCGGCGAGGCGCTGGCGCAGATCGGCTATATTGGCGA
GCAGACCCCAGGGGAGCATCCCGTCGGCGCCTATTTTGAGGCGCACATTGAGCAGGGGCCGATTCTCGAAGATGAAGCGA
AAACCATCGGTATCGTGCAGGGCGTACTGGGGATCCGCTGGTACGACTGCGTGGTCACCGGCCAGGCCTCGCACGCCGGA
CCCACGCCGATGCGCCTGCGTCAGGATGCCCTACAGGTGGCGACCCGCATTATGCAGGAAGTGGTGGCCATTGCCGGGCG
CAGCGAAGAGGGACGCGGCACGGTCGGTAGCGTGCAGGTGTGGCCCAACAGCCGCAACGTGGTGCCCGGGGAGGTCACCT
TCTCCATTGATATGCGCAATCTCAGCGATGCGCTGGTGGACGAGATGGATCGCCAGCTGCGGGCGTTTATCGCGGAGGTT
GAGCGGGAGAGCGGTCTGCAGGTGGCCCTGAAGCAGGTAAGCCACTATCCGGCGGCGCCGTTCGATGCCGAATGCCAGCA
GGCCATTGCCGATGCCGCGCAGCGGCTGGGCTATCCGGCGCGGCCGATCGTCTCCGGCGCCGGACATGACGCAGTGTATA
TGAGCTACCTGGCGCCCACCGGGATGATTTTTATCCCCTGCAAGGACGGGATCAGCCATAACGAAATTGAGTATGCCTCG
CCGGAGCACGTCGCCGCCGGGGCCAACGTGCTGCTGCAGGTGATGCTTCAGTACGCGCGGCCGGTGTAG

Upstream 100 bases:

>100_bases
TGATCGGCGGCAAAAAACCATACAGGATGAAGACCAGGCGTTGATAGCGCATTCCCACCGCCGGTTACGCTGGCGGCGAC
CTTGATGTCAGGAGACCACC

Downstream 100 bases:

>100_bases
ACGGTCGTCCTCCCCGGCGGCGCGTCCTCCAGCCGTTTATCATGCTGTCACCCGGGTAAGGCGGTTACACCGACGCGACC
CGGGACGGCGGATGACGGGG

Product: putative amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGWAREAGMSVTIDKIGNVFMRR
EGRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRTLNDLQIATEAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFP
LEETWAVTDKEGISVGEALAQIGYIGEQTPGEHPVGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAG
PTPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRNLSDALVDEMDRQLRAFIAEV
ERESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPARPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYAS
PEHVAAGANVLLQVMLQYARPV

Sequences:

>Translated_422_residues
MSSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGWAREAGMSVTIDKIGNVFMRR
EGRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRTLNDLQIATEAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFP
LEETWAVTDKEGISVGEALAQIGYIGEQTPGEHPVGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAG
PTPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRNLSDALVDEMDRQLRAFIAEV
ERESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPARPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYAS
PEHVAAGANVLLQVMLQYARPV
>Mature_421_residues
SSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGWAREAGMSVTIDKIGNVFMRRE
GRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRTLNDLQIATEAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFPL
EETWAVTDKEGISVGEALAQIGYIGEQTPGEHPVGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAGP
TPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRNLSDALVDEMDRQLRAFIAEVE
RESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPARPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYASP
EHVAAGANVLLQVMLQYARPV

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=393, Percent_Identity=32.3155216284987, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45599; Mature: 45468

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGW
CCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHH
AREAGMSVTIDKIGNVFMRREGRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRT
HHHCCCEEEHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LNDLQIATEAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFPLEETWAVTDKEGISVGEALA
HHHHEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHH
QIGYIGEQTPGEHPVGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAG
HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCC
PTPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHH
LSDALVDEMDRQLRAFIAEVERESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
RPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYASPEHVAAGANVLLQVMLQYAR
CHHCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PV
CC
>Mature Secondary Structure 
SSDVLFTPATDTTGWRINGDRLWASLMDLAQIGATPKGGCRRLTLTDLDRQGRDKVIGW
CCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHH
AREAGMSVTIDKIGNVFMRREGRNPGLPPIVSGSHIDTQPTGGKFDGNYGVLAALEVVRT
HHHCCCEEEHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LNDLQIATEAPIEVVFWTNEEGSRFVPVMMGSGVFAGVFPLEETWAVTDKEGISVGEALA
HHHHEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHH
QIGYIGEQTPGEHPVGAYFEAHIEQGPILEDEAKTIGIVQGVLGIRWYDCVVTGQASHAG
HHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCC
PTPMRLRQDALQVATRIMQEVVAIAGRSEEGRGTVGSVQVWPNSRNVVPGEVTFSIDMRN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEHHH
LSDALVDEMDRQLRAFIAEVERESGLQVALKQVSHYPAAPFDAECQQAIADAAQRLGYPA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
RPIVSGAGHDAVYMSYLAPTGMIFIPCKDGISHNEIEYASPEHVAAGANVLLQVMLQYAR
CHHCCCCCCCHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]