| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
Click here to switch to the map view.
The map label for this gene is gsiD [H]
Identifier: 238893592
GI number: 238893592
Start: 1445437
End: 1446330
Strand: Direct
Name: gsiD [H]
Synonym: KP1_1503
Alternate gene names: 238893592
Gene position: 1445437-1446330 (Clockwise)
Preceding gene: 238893591
Following gene: 238893593
Centisome position: 27.54
GC content: 63.42
Gene sequence:
>894_bases ATGGTGGATACGGCAACGACGAAAGCGGTCCCGGCCGCAGCGGCCCACGCTACCCGGCAAGGTTACTGGCGCGGCGTGCT GCGCCGCCTACTGCGCGACCCCGGCGGGGTGGTGGTGGGCGTGGTGATCCTCCTGCTGCTGACCCTGGCGCTGCTCGGTC CGTGGCTTATCGTCAAAGATCCCTATCAAACGTCGATGTTCCTGCGCCTGAAACCCATCGGCAGCGATGGCTTCCCGCTG GGCTCGGATGAGCTGGGACGCGACATGCTGTCGCGGCTGATCCTTGGCACCCGACTGTCGCTGTTTATGGGAATTGTCCC GGTGGTGTTTGCCTTTTTTATCGGCGGGGCCATCGGGATTATCGCCGGCTACACGGGCGGCAAAACCAATACCGTGATTA TGCGCACTGTGGATGTGTTCTATGCCTTTCCCTCCGTCCTGCTGGCGATTGCGCTGTCGGGAGCGCTGGGGGCGGGCATC GGCAATGCGCTGCTGTCGCTGACCCTCGTGTTTGTCCCGCAGGTGGCGCGGATTGCCGAGAGCGTGACCGCCCAGGTGCG GCATATGGACTATATCGACGCCGCCCGGGCCACTGGCGCCAGCGCGTTGACCATTATCCGCGTCCAGGTGTTGGGCAACG TGCTCGGGCCGATCTTCGTCTTCTCCACCGGGCTGATTTCGGTGTGCATGATCCTCGCCTCCGGCCTGTCGTTTCTCGGT CTCGGCGTGCGGCCGCCGGAGCCTGAGTGGGGGCTGATGCTCAATACGCTGCGCACGGCAATCTATACCCAGCCGTGGGT GGCCGCCCTGCCGGGCCTGATGATTTTTATCACCTCCATTTCGTTCAATATCCTCGCGGACCGCCTGCGTGCGGCAATGG CGATTAAGGAGTAA
Upstream 100 bases:
>100_bases AGGGCACCATCTGGGTGCTGGCGCTGTTTTTCGTGCTGCTCAACCTGCTGGTGGATATTTTGCAGACCACCCTCGACCCG CGTATTAAGAGGAGCTGACC
Downstream 100 bases:
>100_bases GCGATGCAACCCTTTATCAATATCGACCTTGGCGGGCCGGCGCAGCCGCTGCTGAAGGTCAATCACCTGCTGAAGTACTT TCGCGGCGGCAAAGGCCGGG
Product: putative binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MVDTATTKAVPAAAAHATRQGYWRGVLRRLLRDPGGVVVGVVILLLLTLALLGPWLIVKDPYQTSMFLRLKPIGSDGFPL GSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGIIAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGI GNALLSLTLVFVPQVARIAESVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE
Sequences:
>Translated_297_residues MVDTATTKAVPAAAAHATRQGYWRGVLRRLLRDPGGVVVGVVILLLLTLALLGPWLIVKDPYQTSMFLRLKPIGSDGFPL GSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGIIAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGI GNALLSLTLVFVPQVARIAESVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE >Mature_297_residues MVDTATTKAVPAAAAHATRQGYWRGVLRRLLRDPGGVVVGVVILLLLTLALLGPWLIVKDPYQTSMFLRLKPIGSDGFPL GSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGIIAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGI GNALLSLTLVFVPQVARIAESVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=38.1294964028777, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1787760, Length=258, Percent_Identity=35.6589147286822, Blast_Score=170, Evalue=9e-44, Organism=Escherichia coli, GI1789964, Length=301, Percent_Identity=35.2159468438538, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=34.7457627118644, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1787549, Length=275, Percent_Identity=31.6363636363636, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787498, Length=277, Percent_Identity=29.6028880866426, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788505, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31537; Mature: 31537
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTATTKAVPAAAAHATRQGYWRGVLRRLLRDPGGVVVGVVILLLLTLALLGPWLIVKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEC PYQTSMFLRLKPIGSDGFPLGSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGI CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGIGNALLSLTLVFVPQVARIAE HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHC LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVDTATTKAVPAAAAHATRQGYWRGVLRRLLRDPGGVVVGVVILLLLTLALLGPWLIVKD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEC PYQTSMFLRLKPIGSDGFPLGSDELGRDMLSRLILGTRLSLFMGIVPVVFAFFIGGAIGI CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGYTGGKTNTVIMRTVDVFYAFPSVLLAIALSGALGAGIGNALLSLTLVFVPQVARIAE HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTAQVRHMDYIDAARATGASALTIIRVQVLGNVLGPIFVFSTGLISVCMILASGLSFLG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHC LGVRPPEPEWGLMLNTLRTAIYTQPWVAALPGLMIFITSISFNILADRLRAAMAIKE CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA