| Definition | Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome. |
|---|---|
| Accession | NC_012731 |
| Length | 5,248,520 |
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The map label for this gene is gsiB [H]
Identifier: 238893590
GI number: 238893590
Start: 1442714
End: 1444462
Strand: Direct
Name: gsiB [H]
Synonym: KP1_1501
Alternate gene names: 238893590
Gene position: 1442714-1444462 (Clockwise)
Preceding gene: 238893587
Following gene: 238893591
Centisome position: 27.49
GC content: 61.23
Gene sequence:
>1749_bases TTGGCCTATTTTCGTCCGCGTAAGAGCTGGTACGCATTTTGCCTGTTAATCCGTGACACTTTATTTAACAGGGATCATGT GATGCACAAAAAGACGTTATTTTCGCGTGCCGGTCGTCTCGCCGTGGCGGTGAGCGGCGCACTGGCCCTGGCGGGCGCCG CCTTACCTGCCAACGCCTCCACGCTGCGGATCGCCATGACCGCCGCGGATATTCCGTTAACCCTTGGCCAGCCGGATCAA GGCTATGAGGGCAACCGCTTTACCGGCATCCCGCTGTACGACGCGCTGGTGGAGTGGGATCTGTCGCAAGGTGAAAAGCC CAGCGGTCTGGTGCCGGGGCTGGCGAACGAGTGGCACATCGATCCGCAGAACACCAGCCGCTGGATTTTCACCCTGCGTC CGGGGGTGAAGTTTCATGATGGGACGGAGGTGAACGCCGACGCCATCGTCTGGAACGTGGATAAGGTGCTGAATAAAGCG GCGCCGCAGTACGCCCCGGGTCAGATCGGCAACACCCTGTCGCGCATGCCGACCCTCACCGGCGCAGAGAAAATTGACGA CCACACCGTGGCGCTGACCACCTCGGAACCGGATGCGCTGCTGCCGTACAACATCACCAACCTGTTTATCGTCTCGCCGA CGGCGTGGCAGAAGCAGTATGACGCGGTGCCGGCCAGCGTGAGAGATAGCGCCGCGCGCAGCAAACAGGCGTGGACCGCC TTCGCCGCCCACGCGGTGGGTAGCGGCCCGTTCAAACTGGAGAAGCTGGTGCCGCGTCAGCAGCTGATCCTCGATAAAAA CCCCGACTACTGGAACAAAGATCGCATTCCCCGGGTGGATAAAGTGGTGCTGATCCCCTTGCCGGAGGCCAACGCCCGTA CCGCGGCGCTGTTGTCGAAGCAGGTGGACTGGATTGAAGCCCCGGCGCCGGACGCCATCGATCAGATCAAGTCTCAGGGT TTTCACCTCTACGCCAACACCCAGCCGCATCTGTGGCCCTGGCAGTTCTCCTTTGAAAAAGGATCGCCGTGGCAGGACAT CCGCGTGCGCAAAGCGGCCAACTTGTGTCTGAACCGTGCCGAGCTGAAGAGCTACCTCGGCGGCTACATGACCGAGGCCA CTGGGGTCTACGAGGCTGACAGCCCGTGGCATGGCAAACCCACCTTCCAGATAAAATATGACCCGGACGCCGCCCGCCAG CTAATGACCGAGGCCGGATACAATGCCAGCAAACCGCTGCACGTCACGGTGGCTACCTCGGCCTCCGGCTCCGGGCAGAT GCAGCCCTTGCCGATGAACGAGTATATCCAGCAGAGCCTGAAGAGCTGCTTCTTCAATGTGGATATCAAAGTGGTGGAAT GGAACACCCTGTTTACCAACTGGCGCCTGGGCGCCCGGGACCCCTCGGCGAAAGGGATCGATGCGATCAACGTCAGCGCC GCGGTTAACGATCCTTACTTTGGCCTGATCCGCTTCTCGACGGCCAAAGCGTTTCCGCCGGTGGCGACCAACTGGGGTTA CTTTTCCACGCCGGAGACGGAGAAGCTGGCCGCCGCCGTCAAGCACGCCTTTACCCCGGCGGAGATGAACAAAGCGGCCG GTGAGTTGCACGCCGCGCTGGTGGATCAGGTGCCATTCCTGTTTGTCGCCCACGACGTCGGGCCGCGTGCGATTTCCCCT GCGGTGACCGGGGTGGTGCAACCGCAGAGCTGGTTTATCGACCTCAGCCTGGTGAGCAAAAAAGAGTAA
Upstream 100 bases:
>100_bases CAACATATTTCCCGCTGGCGGTGCGGCGGAATAAGATGCAATTATTTTCCCATAATTATCATGGTGATAATATAAGTCAT TCTTATTTTACCGGTCGGTT
Downstream 100 bases:
>100_bases TCGCGAAAGGGGCGACCGATGATCAATACGCTGCTATACCGCATTCTGCTGGCTATCCCCACCATGCTGGGGGTGGCGGT GATCTGTTTCATGCTGGTGC
Product: putative family 5 extracellular solute-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MAYFRPRKSWYAFCLLIRDTLFNRDHVMHKKTLFSRAGRLAVAVSGALALAGAALPANASTLRIAMTAADIPLTLGQPDQ GYEGNRFTGIPLYDALVEWDLSQGEKPSGLVPGLANEWHIDPQNTSRWIFTLRPGVKFHDGTEVNADAIVWNVDKVLNKA APQYAPGQIGNTLSRMPTLTGAEKIDDHTVALTTSEPDALLPYNITNLFIVSPTAWQKQYDAVPASVRDSAARSKQAWTA FAAHAVGSGPFKLEKLVPRQQLILDKNPDYWNKDRIPRVDKVVLIPLPEANARTAALLSKQVDWIEAPAPDAIDQIKSQG FHLYANTQPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRAELKSYLGGYMTEATGVYEADSPWHGKPTFQIKYDPDAARQ LMTEAGYNASKPLHVTVATSASGSGQMQPLPMNEYIQQSLKSCFFNVDIKVVEWNTLFTNWRLGARDPSAKGIDAINVSA AVNDPYFGLIRFSTAKAFPPVATNWGYFSTPETEKLAAAVKHAFTPAEMNKAAGELHAALVDQVPFLFVAHDVGPRAISP AVTGVVQPQSWFIDLSLVSKKE
Sequences:
>Translated_582_residues MAYFRPRKSWYAFCLLIRDTLFNRDHVMHKKTLFSRAGRLAVAVSGALALAGAALPANASTLRIAMTAADIPLTLGQPDQ GYEGNRFTGIPLYDALVEWDLSQGEKPSGLVPGLANEWHIDPQNTSRWIFTLRPGVKFHDGTEVNADAIVWNVDKVLNKA APQYAPGQIGNTLSRMPTLTGAEKIDDHTVALTTSEPDALLPYNITNLFIVSPTAWQKQYDAVPASVRDSAARSKQAWTA FAAHAVGSGPFKLEKLVPRQQLILDKNPDYWNKDRIPRVDKVVLIPLPEANARTAALLSKQVDWIEAPAPDAIDQIKSQG FHLYANTQPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRAELKSYLGGYMTEATGVYEADSPWHGKPTFQIKYDPDAARQ LMTEAGYNASKPLHVTVATSASGSGQMQPLPMNEYIQQSLKSCFFNVDIKVVEWNTLFTNWRLGARDPSAKGIDAINVSA AVNDPYFGLIRFSTAKAFPPVATNWGYFSTPETEKLAAAVKHAFTPAEMNKAAGELHAALVDQVPFLFVAHDVGPRAISP AVTGVVQPQSWFIDLSLVSKKE >Mature_581_residues AYFRPRKSWYAFCLLIRDTLFNRDHVMHKKTLFSRAGRLAVAVSGALALAGAALPANASTLRIAMTAADIPLTLGQPDQG YEGNRFTGIPLYDALVEWDLSQGEKPSGLVPGLANEWHIDPQNTSRWIFTLRPGVKFHDGTEVNADAIVWNVDKVLNKAA PQYAPGQIGNTLSRMPTLTGAEKIDDHTVALTTSEPDALLPYNITNLFIVSPTAWQKQYDAVPASVRDSAARSKQAWTAF AAHAVGSGPFKLEKLVPRQQLILDKNPDYWNKDRIPRVDKVVLIPLPEANARTAALLSKQVDWIEAPAPDAIDQIKSQGF HLYANTQPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRAELKSYLGGYMTEATGVYEADSPWHGKPTFQIKYDPDAARQL MTEAGYNASKPLHVTVATSASGSGQMQPLPMNEYIQQSLKSCFFNVDIKVVEWNTLFTNWRLGARDPSAKGIDAINVSAA VNDPYFGLIRFSTAKAFPPVATNWGYFSTPETEKLAAAVKHAFTPAEMNKAAGELHAALVDQVPFLFVAHDVGPRAISPA VTGVVQPQSWFIDLSLVSKKE
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1789966, Length=548, Percent_Identity=22.992700729927, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1787495, Length=469, Percent_Identity=24.9466950959488, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI87081878, Length=501, Percent_Identity=24.5508982035928, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1787052, Length=514, Percent_Identity=24.124513618677, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1787762, Length=296, Percent_Identity=28.7162162162162, Blast_Score=73, Evalue=5e-14,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 64149; Mature: 64018
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYFRPRKSWYAFCLLIRDTLFNRDHVMHKKTLFSRAGRLAVAVSGALALAGAALPANAS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCC TLRIAMTAADIPLTLGQPDQGYEGNRFTGIPLYDALVEWDLSQGEKPSGLVPGLANEWHI EEEEEEEECCCEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DPQNTSRWIFTLRPGVKFHDGTEVNADAIVWNVDKVLNKAAPQYAPGQIGNTLSRMPTLT CCCCCCEEEEEECCCCEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHCCHHHHCCCCC GAEKIDDHTVALTTSEPDALLPYNITNLFIVSPTAWQKQYDAVPASVRDSAARSKQAWTA CCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHH FAAHAVGSGPFKLEKLVPRQQLILDKNPDYWNKDRIPRVDKVVLIPLPEANARTAALLSK HHHHHCCCCCCHHHHHCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH QVDWIEAPAPDAIDQIKSQGFHLYANTQPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRA CCCHHCCCCCHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH ELKSYLGGYMTEATGVYEADSPWHGKPTFQIKYDPDAARQLMTEAGYNASKPLHVTVATS HHHHHHCCHHHHCCCCEECCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEEEC ASGSGQMQPLPMNEYIQQSLKSCFFNVDIKVVEWNTLFTNWRLGARDPSAKGIDAINVSA CCCCCCCCCCCHHHHHHHHHHHHEEECEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEE AVNDPYFGLIRFSTAKAFPPVATNWGYFSTPETEKLAAAVKHAFTPAEMNKAAGELHAAL EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VDQVPFLFVAHDVGPRAISPAVTGVVQPQSWFIDLSLVSKKE HHCCCEEEEEECCCCCCCCCHHHEEECCCCEEEEEEEECCCC >Mature Secondary Structure AYFRPRKSWYAFCLLIRDTLFNRDHVMHKKTLFSRAGRLAVAVSGALALAGAALPANAS CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCC TLRIAMTAADIPLTLGQPDQGYEGNRFTGIPLYDALVEWDLSQGEKPSGLVPGLANEWHI EEEEEEEECCCEEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC DPQNTSRWIFTLRPGVKFHDGTEVNADAIVWNVDKVLNKAAPQYAPGQIGNTLSRMPTLT CCCCCCEEEEEECCCCEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHCCHHHHCCCCC GAEKIDDHTVALTTSEPDALLPYNITNLFIVSPTAWQKQYDAVPASVRDSAARSKQAWTA CCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHH FAAHAVGSGPFKLEKLVPRQQLILDKNPDYWNKDRIPRVDKVVLIPLPEANARTAALLSK HHHHHCCCCCCHHHHHCCHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH QVDWIEAPAPDAIDQIKSQGFHLYANTQPHLWPWQFSFEKGSPWQDIRVRKAANLCLNRA CCCHHCCCCCHHHHHHHHCCEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH ELKSYLGGYMTEATGVYEADSPWHGKPTFQIKYDPDAARQLMTEAGYNASKPLHVTVATS HHHHHHCCHHHHCCCCEECCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCEEEEEEEC ASGSGQMQPLPMNEYIQQSLKSCFFNVDIKVVEWNTLFTNWRLGARDPSAKGIDAINVSA CCCCCCCCCCCHHHHHHHHHHHHEEECEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEE AVNDPYFGLIRFSTAKAFPPVATNWGYFSTPETEKLAAAVKHAFTPAEMNKAAGELHAAL EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VDQVPFLFVAHDVGPRAISPAVTGVVQPQSWFIDLSLVSKKE HHCCCEEEEEECCCCCCCCCHHHEEECCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA