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The map label for this gene is yeeY [H]

Identifier: 238893328

GI number: 238893328

Start: 1171940

End: 1172842

Strand: Reverse

Name: yeeY [H]

Synonym: KP1_1206

Alternate gene names: 238893328

Gene position: 1172842-1171940 (Counterclockwise)

Preceding gene: 238893332

Following gene: 238893322

Centisome position: 22.35

GC content: 59.91

Gene sequence:

>903_bases
ATGCGCGTAAACTTTGATGTTTTGATGATCCTTGATGCCCTTGACCGCCACGGATCCTTCGCCACCGCCGCGGAGTCGCT
GTATAAAACCCCCGCCGCTCTGAGCTATATGATCCAGAAGCTGGAGAGCGATCTGAACATCGTGCTGTTGGATCGTTCCG
GCCATCGGGCAAAATTTACCGATACCGGCCGGCTGATGCTGGAGAAGGGGCGACAGCTTTTAAGTGCCGCCAGAGATCTG
GAAAAGCAGGCCCAGCAGCTGAGCGCGGGCTGGGAGCGAGAGCTAGCCATCGCCCTTGACGCCTCATTTCCCTTTTCGGC
TCTGCTGCCGCTGATCGCCGAGTTTTACGCGCAAAACCCACAGACGCGACTGAACTTCAGCCATCACACCCTCGCCGGTT
CGTGGGAAGAGCTGACCCATCATGGGGCGGATATTATCCTCGGCGCCATCAATGAGCCGCCCACCTCCGCGGAGTGGTCA
TGGCAAACCCTCGGCGCGTTGGATAACATCTTCGTCGTCGCCCCCCATCACCCGCTGGCTCAGGCGAAGGAGCCACTGGC
CAATAAACAGCTCAGCCAGCATCGGGCCATCGTGATCCGCGACAGCGCCCGCTATTGCCATCCGCTCAACAGCAATCTCC
TCGACGAGCAGCCGCAAATCGGCGTCGATGATTTCGCCAGTAAAGTCGAACTATTGTGCGCCGGGCTGGGCTGCGGCTTT
TTGCCGCGCCATATCGCTCGCCCGTGGCTGGTAAAAGGCAGTCTGGTGGAGAAAAGCGTCGCCTGCTGGCGGGAAAAGGA
TATTACCTATATGGCCTGGCGCAGCGGGAATGATGGGCTGGCTCAGCGCTGGTGGCGGGAGGCGCTCCTCCGCGGCGACC
TGCTGAGCCAGCTCTACCATTAA

Upstream 100 bases:

>100_bases
TTTTAATCAAATTTTTACGCCAAACTGTTCTGATTTATTCACTGGCTTTGATTATTGCGCTTAGGTACAACAGAGAAAAC
AAATTAATGGATAGCTTCAT

Downstream 100 bases:

>100_bases
CGGCCGGACCAGACGTTGGCGGAGATGGCCGGGAGGGTCAGCACCCCGTCCTGGAAGGCGCCGGCGCCCTCCTGCAGCGT
CCACCCGGCCACGTTCAGCA

Product: putative LysR-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLNIVLLDRSGHRAKFTDTGRLMLEKGRQLLSAARDL
EKQAQQLSAGWERELAIALDASFPFSALLPLIAEFYAQNPQTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWS
WQTLGALDNIFVVAPHHPLAQAKEPLANKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGF
LPRHIARPWLVKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYH

Sequences:

>Translated_300_residues
MRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLNIVLLDRSGHRAKFTDTGRLMLEKGRQLLSAARDL
EKQAQQLSAGWERELAIALDASFPFSALLPLIAEFYAQNPQTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWS
WQTLGALDNIFVVAPHHPLAQAKEPLANKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGF
LPRHIARPWLVKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYH
>Mature_300_residues
MRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLNIVLLDRSGHRAKFTDTGRLMLEKGRQLLSAARDL
EKQAQQLSAGWERELAIALDASFPFSALLPLIAEFYAQNPQTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWS
WQTLGALDNIFVVAPHHPLAQAKEPLANKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGF
LPRHIARPWLVKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=299, Percent_Identity=51.8394648829431, Blast_Score=316, Evalue=1e-87,
Organism=Escherichia coli, GI1789492, Length=282, Percent_Identity=40.7801418439716, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787949, Length=295, Percent_Identity=29.1525423728814, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1786713, Length=277, Percent_Identity=30.3249097472924, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786508, Length=297, Percent_Identity=27.2727272727273, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI157672245, Length=171, Percent_Identity=32.7485380116959, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI145693193, Length=249, Percent_Identity=27.3092369477912, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787601, Length=288, Percent_Identity=24.6527777777778, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1790262, Length=265, Percent_Identity=23.7735849056604, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33665; Mature: 33665

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLNIVLLDRSGHRAKFT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEC
DTGRLMLEKGRQLLSAARDLEKQAQQLSAGWERELAIALDASFPFSALLPLIAEFYAQNP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
QTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAPHHPLA
CCEECCCHHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH
QAKEPLANKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGF
HHHCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
LPRHIARPWLVKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYH
HHHHHCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVNFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLNIVLLDRSGHRAKFT
CCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEC
DTGRLMLEKGRQLLSAARDLEKQAQQLSAGWERELAIALDASFPFSALLPLIAEFYAQNP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCC
QTRLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAPHHPLA
CCEECCCHHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH
QAKEPLANKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGF
HHHCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
LPRHIARPWLVKGSLVEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYH
HHHHHCCCCEECCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]