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The map label for this gene is int [H]

Identifier: 238893258

GI number: 238893258

Start: 1101653

End: 1102003

Strand: Reverse

Name: int [H]

Synonym: KP1_1131

Alternate gene names: 238893258

Gene position: 1102003-1101653 (Counterclockwise)

Preceding gene: 238893259

Following gene: 238893257

Centisome position: 21.0

GC content: 48.72

Gene sequence:

>351_bases
ATGAAACTTAATGCGAGACAGGTAGACACGGCTAAACCCAGAGAGAAAGCCTATCAGCTGGCAGATGGTGCTGGTTTGTA
TCTTGAGGTTGTTCCCTCTGGTTCCAGATACTGGCGAATGAAATATCGCTTCAATGGAAAAAAGAATCGTCTGGCTTTCG
GTGTCTATCCAGCAGTGTCGCTTGCGCAAGCAAGAGCACTGCGTGATGACGCCAAGAAAAAGCTGGCTGAGGGGATCGAT
CCATCTTTTGCCAAGAAAGAAGAAAAGCTGGTTCGCGATGTGCAACTCAACAACACGTTTCAGTCTGTCGCTCTGGAGTG
GATAGTTCGAAAGCGAGCCGATGGTCAGTAG

Upstream 100 bases:

>100_bases
GGTTCTTATATTCCGTTATCAACTTGATTCAACCGAAATCAAGCACCTATTGAGGGCATAAGTGGGGGCATTCTGTGTTC
GGTCCTGGGAGATGCCCCCA

Downstream 100 bases:

>100_bases
GTTACGCATCCGACATTCTTGAAGCGTTTAACAAACATGTTTTCCCTTACATCTGTCAAAAGCCTATTGCTGATATTAAG
CCCCTTGACCCTGGCCCAAA

Product: CP4-like integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKLNARQVDTAKPREKAYQLADGAGLYLEVVPSGSRYWRMKYRFNGKKNRLAFGVYPAVSLAQARALRDDAKKKLAEGID
PSFAKKEEKLVRDVQLNNTFQSVALEWIVRKRADGQ

Sequences:

>Translated_116_residues
MKLNARQVDTAKPREKAYQLADGAGLYLEVVPSGSRYWRMKYRFNGKKNRLAFGVYPAVSLAQARALRDDAKKKLAEGID
PSFAKKEEKLVRDVQLNNTFQSVALEWIVRKRADGQ
>Mature_116_residues
MKLNARQVDTAKPREKAYQLADGAGLYLEVVPSGSRYWRMKYRFNGKKNRLAFGVYPAVSLAQARALRDDAKKKLAEGID
PSFAKKEEKLVRDVQLNNTFQSVALEWIVRKRADGQ

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788690, Length=110, Percent_Identity=40, Blast_Score=84, Evalue=2e-18,
Organism=Escherichia coli, GI145693166, Length=107, Percent_Identity=36.4485981308411, Blast_Score=80, Evalue=4e-17,
Organism=Escherichia coli, GI1788974, Length=109, Percent_Identity=42.2018348623853, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 13216; Mature: 13216

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNARQVDTAKPREKAYQLADGAGLYLEVVPSGSRYWRMKYRFNGKKNRLAFGVYPAVS
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEECCHHHH
LAQARALRDDAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWIVRKRADGQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLNARQVDTAKPREKAYQLADGAGLYLEVVPSGSRYWRMKYRFNGKKNRLAFGVYPAVS
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEECCHHHH
LAQARALRDDAKKKLAEGIDPSFAKKEEKLVRDVQLNNTFQSVALEWIVRKRADGQ
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]