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The map label for this gene is csiD [H]

Identifier: 238893235

GI number: 238893235

Start: 1077926

End: 1078942

Strand: Reverse

Name: csiD [H]

Synonym: KP1_1104

Alternate gene names: 238893235

Gene position: 1078942-1077926 (Counterclockwise)

Preceding gene: 238893238

Following gene: 238893234

Centisome position: 20.56

GC content: 59.19

Gene sequence:

>1017_bases
ATGAACATCACCCTGACCTTACAGCGAGGAACGATCCTGATGAACGCCCTGACCGCAGTAAAACCGACACCCGCGCCGGT
AGCCCAGCAATACCCTGGCTTTTCTTTCACCCCTTCCGCCCAGTCGCCGCGCCTGCTGGAGCTCACCTTTTCCGCCGAAA
CGACCACGCAGTTCCTGCAGCAGGTCGCGCAGTGGCCGGTGCAGGCGCTGGAGTACAAATCTTTCTTACGCTTCCAGGTC
GGCAAGATCCTCGACGATCTGTGTGGCAATCAGCTGCAGCCGTTGCTGATCAAAACATTGCTCGATCGCGCGGAAGGCGC
GCTGCTTATCAACGGCGAAGGGATCGATCACGTCAGCCAGGCCGAGGAGATGGTCAAGCTGGCCACCGCCGTCGCCCACC
TGATTGGTCGTTCCAACTTCGACGCCATGAGCGGTCAGTATTACGCCCGCTTCGTGGTGAAAAATGTCGATAACTCAGAC
AGCTACCTGCGCCAGCCGCACCGGGTGATGGAGCTGCACAACGACGGCACCTACGTCGAAGAGCAAACCGACTACGTATT
AATGATGAAGATCGACGAGCAGAACATGCAGGGCGGCAATTCCCTGCTGCTGCATCTCGACGACTGGGAGCATCTCGACG
AATTCTTCCGCGACCCGCTGGCCCGCCGCCCGATGCGCTGGGCCGCGCCGCCGAGCAAAAACGTCAGCAAGGATGTTTTC
CACCCGGTGTTCGACGTCGATTCGCTGGGCCGCCCGGTAATGCGCTATATCGACCAGTTCGTCCAGCCGAAAGATTTCGA
AGAAGGCACCTGGCTGAGCCGCCTCTCCGACGCGCTGGAGACCAGCAAAAACATCCTTTCCATACCGGTGCCGGTGGGCA
AATTTCTGCTCATTAACAACCTGTTCTGGCTGCACGGCCGCGACCGCTTTACGCCGCACCCGGACCTGCGCCGCGAGCTG
ATGCGCCAGCGCGGCTACTTTGCGTATTCCACGAATCATTACCAGACTCATCAATAA

Upstream 100 bases:

>100_bases
CATTGTTAAATAATTGTTGTCAGATCACAAAATGGAAACAAAAAGGCCATTTCGTACGCATTTTATAAAAATGTAGATAT
TTTTAATTTATGGCTACGAA

Downstream 100 bases:

>100_bases
GGGTTTTCAGGCGAAGGAATTGAGCGGATGTATGATTTCGTGATTATCGGCGGCGGCATCATCGGCATGTCGACCGCCAT
GCAGTTAATTGAGATTTACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MNITLTLQRGTILMNALTAVKPTPAPVAQQYPGFSFTPSAQSPRLLELTFSAETTTQFLQQVAQWPVQALEYKSFLRFQV
GKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDHVSQAEEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSD
SYLRQPHRVMELHNDGTYVEEQTDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVF
HPVFDVDSLGRPVMRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL
MRQRGYFAYSTNHYQTHQ

Sequences:

>Translated_338_residues
MNITLTLQRGTILMNALTAVKPTPAPVAQQYPGFSFTPSAQSPRLLELTFSAETTTQFLQQVAQWPVQALEYKSFLRFQV
GKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDHVSQAEEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSD
SYLRQPHRVMELHNDGTYVEEQTDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVF
HPVFDVDSLGRPVMRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL
MRQRGYFAYSTNHYQTHQ
>Mature_338_residues
MNITLTLQRGTILMNALTAVKPTPAPVAQQYPGFSFTPSAQSPRLLELTFSAETTTQFLQQVAQWPVQALEYKSFLRFQV
GKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDHVSQAEEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSD
SYLRQPHRVMELHNDGTYVEEQTDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVF
HPVFDVDSLGRPVMRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINNLFWLHGRDRFTPHPDLRREL
MRQRGYFAYSTNHYQTHQ

Specific function: May be involved in the control of utilization of gamma- aminobutyric acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsiD family [H]

Homologues:

Organism=Escherichia coli, GI87082147, Length=325, Percent_Identity=86.7692307692308, Blast_Score=575, Evalue=1e-165,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015038 [H]

Pfam domain/function: PF08943 CsiD [H]

EC number: NA

Molecular weight: Translated: 38811; Mature: 38811

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITLTLQRGTILMNALTAVKPTPAPVAQQYPGFSFTPSAQSPRLLELTFSAETTTQFLQ
CCEEEEEECCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
QVAQWPVQALEYKSFLRFQVGKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDHVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHH
AEEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVE
HHHHHHHHHHHHHHHCCCCCCHHCCHHHEEEEECCCCCCHHHHHCCHHHHHCCCCCCEEE
EQTDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVF
CCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHH
HPVFDVDSLGRPVMRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINN
HHHHCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHC
LFWLHGRDRFTPHPDLRRELMRQRGYFAYSTNHYQTHQ
EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC
>Mature Secondary Structure
MNITLTLQRGTILMNALTAVKPTPAPVAQQYPGFSFTPSAQSPRLLELTFSAETTTQFLQ
CCEEEEEECCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHH
QVAQWPVQALEYKSFLRFQVGKILDDLCGNQLQPLLIKTLLDRAEGALLINGEGIDHVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHH
AEEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVE
HHHHHHHHHHHHHHHCCCCCCHHCCHHHEEEEECCCCCCHHHHHCCHHHHHCCCCCCEEE
EQTDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDEFFRDPLARRPMRWAAPPSKNVSKDVF
CCCCEEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHH
HPVFDVDSLGRPVMRYIDQFVQPKDFEEGTWLSRLSDALETSKNILSIPVPVGKFLLINN
HHHHCHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHC
LFWLHGRDRFTPHPDLRRELMRQRGYFAYSTNHYQTHQ
EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA