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The map label for this gene is rhaP [H]

Identifier: 238892316

GI number: 238892316

Start: 64510

End: 65517

Strand: Reverse

Name: rhaP [H]

Synonym: KP1_0067

Alternate gene names: 238892316

Gene position: 65517-64510 (Counterclockwise)

Preceding gene: 238892317

Following gene: 238892315

Centisome position: 1.25

GC content: 61.81

Gene sequence:

>1008_bases
ATGATGGGACACGCATGGCTGAAACATCGCGAAGCGCTGCTGGCGGTGGTCATCATTTTGATGATCGGCGCCATCGGCAG
CCGGGCGCCGTCGTTCGTTTCACCGGGCAATCTGGTGGAGATGTTTAACGATACCGCCATCCTTATCATCCTCGCCCTCG
GCCAGATGATGGTGTTGCTCACCAAAGGCATTGATCTGTCGATGGCTGCCAACCTGGCGCTGACCGGGATGATCGTCGCC
CTGCTTAACGCCCACTATCCGGGTATTCCGGTGGTGGCGCTGCTGGCGCTGGCGACTCTGCTGGGCCTGCTGATGGGAGT
AATTAACGGCCTGCTGGTCTGGCGCCTCGGCATTCCCGCCATTGTGGTGACCCTGGGCACCATGAGCATTTATCGCGGCA
TTATCTTCCTGCTGACTGACGGCGGCTGGGTTAACTCACATCAGATGAGTGCTGATTTTCTCAGTCTGCCGCGCAGCCCC
CTCCTTGGGCTGCCGCTACTGAGCTGGTGCGCCATCGCCGCGCTGCTGCTGGTGGGTTATTTCCTGCGCTACAGCCGCAC
CGGCCGGGCCTTATACACCGCGGGCGGCAACGCGACGGCGGCATACTACACCGGCATTAACGCCGGAAAAATGCAGTTCG
TCAGCTTCTGTCTCTCCGGCGCGCTGGCCGGCTTCTGCGGCTATCTGTGGATCTCGCGCTTCGCCGTCGCCTATGTCGAC
GTCGCCAACGGTTTTGAACTCCAGGTGGTCGCCGCCTGCGTGATCGGCGGTATCAGCACCATGGGCGGAAGCGGACGGGT
GCTGGGCTGCCTGTGCGGCGCGCTGTTCCTCGGGGTCATTAATAACGCCCTGCCAGTGATCGGCATCTCGCCCTTCTGGC
AGATGGCGATTTCCGGGGCGGTGATCGTCATGGCGGTGCTGCTCAACGAGCGCGGCAATCGCGGTCACGGGCGGTTAATC
CTGCGCAACGCGGCGTTAGCCCGACAGAAACAGGCGGTGAAATCATGA

Upstream 100 bases:

>100_bases
TCGTAATGCACGAAGGGCTGATGGTCGCCGAGTACCGGGCCGGGGAAGCGACGGCGGAAACCATCGTTAGCGCCGCCAGC
GGCATCGGCCAGGAGGCGGC

Downstream 100 bases:

>100_bases
GCAAAATGATGGTATCTGAAGAGATGAAAAACGCCCCGGCCGCGCCGTCGCCGCTGCGCCGCCTGCTGTGCTGGGAAGGG
TTTTTACTGGCGGTCACCCT

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MMGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVA
LLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPAIVVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSP
LLGLPLLSWCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVD
VANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGAVIVMAVLLNERGNRGHGRLI
LRNAALARQKQAVKS

Sequences:

>Translated_335_residues
MMGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVA
LLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPAIVVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSP
LLGLPLLSWCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVD
VANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGAVIVMAVLLNERGNRGHGRLI
LRNAALARQKQAVKS
>Mature_335_residues
MMGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLLTKGIDLSMAANLALTGMIVA
LLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPAIVVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSP
LLGLPLLSWCAIAALLLVGYFLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVD
VANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGAVIVMAVLLNERGNRGHGRLI
LRNAALARQKQAVKS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=314, Percent_Identity=34.7133757961783, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1790524, Length=306, Percent_Identity=31.0457516339869, Blast_Score=148, Evalue=6e-37,
Organism=Escherichia coli, GI1788896, Length=303, Percent_Identity=33.003300330033, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787793, Length=309, Percent_Identity=35.5987055016181, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI145693152, Length=271, Percent_Identity=31.3653136531365, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI87082395, Length=294, Percent_Identity=30.2721088435374, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788471, Length=318, Percent_Identity=31.7610062893082, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789992, Length=362, Percent_Identity=23.7569060773481, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI145693214, Length=261, Percent_Identity=32.183908045977, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787794, Length=301, Percent_Identity=25.9136212624585, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35261; Mature: 35261

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
TKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSPLLGLPLLSWCAIAALLLVGY
HHHHHHHHHHHCCEEEEEECCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVD
HHHHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGA
HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHH
VIVMAVLLNERGNRGHGRLILRNAALARQKQAVKS
HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MMGHAWLKHREALLAVVIILMIGAIGSRAPSFVSPGNLVEMFNDTAILIILALGQMMVLL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
TKGIDLSMAANLALTGMIVALLNAHYPGIPVVALLALATLLGLLMGVINGLLVWRLGIPA
HCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVVTLGTMSIYRGIIFLLTDGGWVNSHQMSADFLSLPRSPLLGLPLLSWCAIAALLLVGY
HHHHHHHHHHHCCEEEEEECCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
FLRYSRTGRALYTAGGNATAAYYTGINAGKMQFVSFCLSGALAGFCGYLWISRFAVAYVD
HHHHCCCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VANGFELQVVAACVIGGISTMGGSGRVLGCLCGALFLGVINNALPVIGISPFWQMAISGA
HCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHH
VIVMAVLLNERGNRGHGRLILRNAALARQKQAVKS
HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]