Click here to switch to the map view.

The map label for this gene is yieP [H]

Identifier: 238892270

GI number: 238892270

Start: 14902

End: 15603

Strand: Reverse

Name: yieP [H]

Synonym: KP1_0014

Alternate gene names: 238892270

Gene position: 15603-14902 (Counterclockwise)

Preceding gene: 238892271

Following gene: 238892269

Centisome position: 0.3

GC content: 53.99

Gene sequence:

>702_bases
ATGTCTTTAAGCGCACAGCAACTGGCGGCACAAAAGAACATCTCCTGGGTACTGGCCGAAAAGCTCGCCCAAAAAATACT
GACTGGCGAATATCAGCCGGAAAGCATTCTTCCCGGCGAAATGGAGTTGGGGGAGCAGTTCGGCGTAAGCCGTACCGCCG
TCCGCGAAGCGGTGAAGACGCTTACTGCAAAAGGCATGCTGCTGCCCCGCCCTCGCATTGGCACCCGGGTGATGCCGCGC
AGCAGCTGGAATTTCCTTGATAAGGAACTGCTCTCCTGGTGGCTAACAGAAGATAACTTCGAAGAGGTGGTAAGCCACTT
TCTCGTCATGCGCAGCAGCCTGGAGCCACAGGCCTGCTTTCTCGCCGCCGCCAACGGCACCGCCGGGCAAAAAGCGCAGC
TCAATACATTAATGGAAGAGATGATTGCTCTGAAACGCCATTTTCAGCGCGAACGCTGGATAGAAGTCGATATGGCCTGG
CATGAACATATCTATGAAATGAGCGGTAATCCTTTCCTCAGCTCTTTCGCCTCGCTGTTTCATTCGGTCTACCACACCTA
CTTCACGTCGATTACGCAAAATGAAGTGGTGAAGCTCGATCTCCACCAGGCGATTGTCGATGCCATTCTTAACAGTGATG
CGCCGGGGGCGTTGCTCGCCTGCCAGGCATTGTTGAACGCCCCACACCACGTAAATCAATAA

Upstream 100 bases:

>100_bases
GAGGAATGTCGCAAAAAACCGCCGTTTTGCCGTTTTAACCGACGAAACGGGGCGCCTGGTGGCATACTGTTAGAGTAGAG
GAAAGAAAGGAACGGCATTT

Downstream 100 bases:

>100_bases
CAAGGATTTGGCATGAGCGGAAAAAAAGGGCGCAGCATGGCTGGCCTGCCGTGGATCGCGGCGATGGCCTTCTTTATGCA
GGCGCTGGATGCCACCATTC

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKTLTAKGMLLPRPRIGTRVMPR
SSWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACFLAAANGTAGQKAQLNTLMEEMIALKRHFQRERWIEVDMAW
HEHIYEMSGNPFLSSFASLFHSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHHVNQ

Sequences:

>Translated_233_residues
MSLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKTLTAKGMLLPRPRIGTRVMPR
SSWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACFLAAANGTAGQKAQLNTLMEEMIALKRHFQRERWIEVDMAW
HEHIYEMSGNPFLSSFASLFHSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHHVNQ
>Mature_232_residues
SLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKTLTAKGMLLPRPRIGTRVMPRS
SWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACFLAAANGTAGQKAQLNTLMEEMIALKRHFQRERWIEVDMAWH
EHIYEMSGNPFLSSFASLFHSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHHVNQ

Specific function: Unknown

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=228, Percent_Identity=79.3859649122807, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI48994955, Length=200, Percent_Identity=33, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI1786303, Length=129, Percent_Identity=37.2093023255814, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26306; Mature: 26175

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKT
CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LTAKGMLLPRPRIGTRVMPRSSWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACF
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEE
LAAANGTAGQKAQLNTLMEEMIALKRHFQRERWIEVDMAWHEHIYEMSGNPFLSSFASLF
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHHVNQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLSAQQLAAQKNISWVLAEKLAQKILTGEYQPESILPGEMELGEQFGVSRTAVREAVKT
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LTAKGMLLPRPRIGTRVMPRSSWNFLDKELLSWWLTEDNFEEVVSHFLVMRSSLEPQACF
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHEE
LAAANGTAGQKAQLNTLMEEMIALKRHFQRERWIEVDMAWHEHIYEMSGNPFLSSFASLF
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
HSVYHTYFTSITQNEVVKLDLHQAIVDAILNSDAPGALLACQALLNAPHHVNQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]