| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is htrB [H]
Identifier: 238028904
GI number: 238028904
Start: 3830789
End: 3831673
Strand: Direct
Name: htrB [H]
Synonym: bglu_1g33690
Alternate gene names: 238028904
Gene position: 3830789-3831673 (Clockwise)
Preceding gene: 238028902
Following gene: 238028905
Centisome position: 98.06
GC content: 67.57
Gene sequence:
>885_bases ATGCTAGGCCGTCTCGGCACCCGCTTCGCGCTGCTCTTGCTGAAGCTGTTCGCGCTGCTGCCGTATGGCTTGACGGCGCG TTTCGGCGACGCGCTGGGCTGGCTGCTGTACCGTATCCCGAGCCGCCGCAAGCGCATCGTGCATACGAACCTGAAGCTCT GCTTTCCCGAGTGGAGCGAGGCGCGGCGCGAGGAAGTCGCGGGCCGGCACTTTCGCCATGCGATTCGCAGCTACGTCGAG CGCAGCGTCCAGTGGTTCGGCTCCGAGAAGAAGCTCGCCCGGCTCATCGAGGTCGACAGCGCGATCGACCTGACCGATCC GGACCTGCCGCCCACGCTGTTTCTCGGCCTGCATTTCGTCGGCATCGAGGCCGGCTCGATCTGGCTGAACCGCTCGCTGC AACGCACCTGCGGTTCGTTGTACCAACCGTTTTCAAACCCGCTGCTCGAGGCCGAGGCCAAGCGCGCGCGCGCGCGCTTC GACGCCGAGATGGCGAGCCGCGCCGACAGCGCGCGCATCGTGCTGCGCTGGCTGCGCGAGCGCAAGCCCGTGATGCTCGG CGCCGACATGGACTACGGCACGCGCAACTCCACCTTCGTGCCGTTCTTCGGCATCCCCACCTGCACGCTGACCGCGGTGG GCCGGCTGGCGAAGGCCGGCCGCGCGCAGGTCGTGCCGTTCATCGGCGAGGTGCTGCCGAACTACAAGGGCTATCGGCTG CGCGTGTTCAAGCCCTGGGAGCAATACCCGACCGGCGACGACGACCTCGACGCGCGCCGCATGAACGCGTTCCTCGAGGA GCAGATCCCGCTGCTGCCCGAGCAGTATTACTGGGTGCACAAGCGCTTCAAGACGCGTCCGGCCGGCGAGCCGGGCTTTT ACTGA
Upstream 100 bases:
>100_bases TTCCCGTCTTGTCACGCAAGGGTGCATTCGTGGTTGCCCACCGCTACGTCCTGAATTTCCCCCTCACGGCACGGGCCTTC CGGCCCCATGGAGGCCGCTC
Downstream 100 bases:
>100_bases TCGTGATCGCGGGCGCGGCGGTGCCGGCTCGGCCGCCGCCGAGGTTCGCAAGCCGCGCCCGGCGCGGCATACAATAACGC CCATGAAACTTCCGTTCACC
Product: lipid A biosynthesis lauroyl acyltransferase
Products: KDO2-(lauroyl)-lipid IVA [C]
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MLGRLGTRFALLLLKLFALLPYGLTARFGDALGWLLYRIPSRRKRIVHTNLKLCFPEWSEARREEVAGRHFRHAIRSYVE RSVQWFGSEKKLARLIEVDSAIDLTDPDLPPTLFLGLHFVGIEAGSIWLNRSLQRTCGSLYQPFSNPLLEAEAKRARARF DAEMASRADSARIVLRWLRERKPVMLGADMDYGTRNSTFVPFFGIPTCTLTAVGRLAKAGRAQVVPFIGEVLPNYKGYRL RVFKPWEQYPTGDDDLDARRMNAFLEEQIPLLPEQYYWVHKRFKTRPAGEPGFY
Sequences:
>Translated_294_residues MLGRLGTRFALLLLKLFALLPYGLTARFGDALGWLLYRIPSRRKRIVHTNLKLCFPEWSEARREEVAGRHFRHAIRSYVE RSVQWFGSEKKLARLIEVDSAIDLTDPDLPPTLFLGLHFVGIEAGSIWLNRSLQRTCGSLYQPFSNPLLEAEAKRARARF DAEMASRADSARIVLRWLRERKPVMLGADMDYGTRNSTFVPFFGIPTCTLTAVGRLAKAGRAQVVPFIGEVLPNYKGYRL RVFKPWEQYPTGDDDLDARRMNAFLEEQIPLLPEQYYWVHKRFKTRPAGEPGFY >Mature_294_residues MLGRLGTRFALLLLKLFALLPYGLTARFGDALGWLLYRIPSRRKRIVHTNLKLCFPEWSEARREEVAGRHFRHAIRSYVE RSVQWFGSEKKLARLIEVDSAIDLTDPDLPPTLFLGLHFVGIEAGSIWLNRSLQRTCGSLYQPFSNPLLEAEAKRARARF DAEMASRADSARIVLRWLRERKPVMLGADMDYGTRNSTFVPFFGIPTCTLTAVGRLAKAGRAQVVPFIGEVLPNYKGYRL RVFKPWEQYPTGDDDLDARRMNAFLEEQIPLLPEQYYWVHKRFKTRPAGEPGFY
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA. Has 10 fold selectivity for lauroyl- ACP over myristoyl-ACP [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=291, Percent_Identity=34.7079037800687, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI87082094, Length=291, Percent_Identity=31.2714776632302, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1788161, Length=261, Percent_Identity=31.0344827586207, Blast_Score=95, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 33881; Mature: 33881
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGRLGTRFALLLLKLFALLPYGLTARFGDALGWLLYRIPSRRKRIVHTNLKLCFPEWSE CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHH ARREEVAGRHFRHAIRSYVERSVQWFGSEKKLARLIEVDSAIDLTDPDLPPTLFLGLHFV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHE GIEAGSIWLNRSLQRTCGSLYQPFSNPLLEAEAKRARARFDAEMASRADSARIVLRWLRE EEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RKPVMLGADMDYGTRNSTFVPFFGIPTCTLTAVGRLAKAGRAQVVPFIGEVLPNYKGYRL CCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEE RVFKPWEQYPTGDDDLDARRMNAFLEEQIPLLPEQYYWVHKRFKTRPAGEPGFY EEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLGRLGTRFALLLLKLFALLPYGLTARFGDALGWLLYRIPSRRKRIVHTNLKLCFPEWSE CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEECCCHHH ARREEVAGRHFRHAIRSYVERSVQWFGSEKKLARLIEVDSAIDLTDPDLPPTLFLGLHFV HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHE GIEAGSIWLNRSLQRTCGSLYQPFSNPLLEAEAKRARARFDAEMASRADSARIVLRWLRE EEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RKPVMLGADMDYGTRNSTFVPFFGIPTCTLTAVGRLAKAGRAQVVPFIGEVLPNYKGYRL CCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEE RVFKPWEQYPTGDDDLDARRMNAFLEEQIPLLPEQYYWVHKRFKTRPAGEPGFY EEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: KDO2-lipid IVA; lauroyl-ACP [C]
Specific reaction: KDO2-lipid IVA + lauroyl-ACP = KDO2-(lauroyl)-lipid IVA + [acyl carrier protein] [C]
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]