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The map label for this gene is fliF [H]

Identifier: 238028887

GI number: 238028887

Start: 3811172

End: 3812971

Strand: Direct

Name: fliF [H]

Synonym: bglu_1g33520

Alternate gene names: 238028887

Gene position: 3811172-3812971 (Clockwise)

Preceding gene: 238028881

Following gene: 238028888

Centisome position: 97.56

GC content: 70.28

Gene sequence:

>1800_bases
ATGGAATCGCAGGCCAACTCGCTGATCAACCCAGACGCGCGCAACGCCGTCGCCGGCACGTCGCCGAACGCGACCGCCGC
GGCCGGCACGTTGCCGGGCGCCGGCGCGGGCGGCGCAGACTTCGGCATGGGCGGTTTCGCCGAACGCTTCTCCGGGCTGC
CAGGCATGTCGCGGATGCGCACCAACCCGAAGCTGCCGTTCCTGATCATCACCGCGCTGGCGATCGCCGCGATCGTCGCG
CTGGTGCTCTGGAGCCGCGCCCCCGACTACCGGGTGCTGTACAGCAACCTGTCGGACCGCGACGGCGGCGCGATCATTAC
CGCCCTGCAGCAAGCCAATATTCCCTATCAGTTCGCCGACGCCGGCGGCGCGATCCTGGTGCCGGCCAGCCAGGTCCACG
AAACGCGCCTGAGGCTGGCCGCGATGGGCCTGCCCAAGGGCGGCTCGGTGGGCTTCGAGCTGATGGACAACCAGAAGTTC
GGCATCAGCCAGTTCGCCGAGCAGGTCAACTACCAGCGCGCGCTCGAGGGCGAGCTGGAGCGCACCATCGCCTCGATCAA
CGCGGTGCGCAGCGCGCGCGTGCATCTGGCGATCCCCAAGCCGTCGGTGTTCGTGCGCGATCGCGAGGCGCCGAGCGCGT
CGGTGTTCGTCGATCTCTACCCGGGCCGCGTGCTCGACGACGGCCAGGTGCTGGCGATCACGCGCATGGTGGCCTCGGGC
GTGCCCGACATGCCGGCCAAGAACGTCACGATCGTCGACCAGGACGGCAACCTGCTGAGCCAGCAGCCGTCGTCGTCCGG
GCTCGACGCGAACCAGCTCAAGTACGTGCAGCAGGTCGAGCACAACACCCAGAAGCGCATCGACGCGATCCTCGCGCCGA
TGTTCGGCGCCGGCAACACGCGCTCGCAGGTCAGCGCCGACATCGATTTCACCAGGAGCGAGCAGACCTCGGAGAGCTAC
GCGCCGAACGGCACGCAGCAGCAGGCGGCGATCCGCAGCCAGCAGACCTCGTCGTCCGTCGAGAGCGCGCAAAGCGGCGC
GGGCGGCGTGCCGGGCGCGCTGTCGAACACGCCGCCGCAGCCGGCCTCGGCGCCGATCACGGGCGCGAGCGGCGCGGCCG
GCACGCCGCCCACGCCGATCAGCGACCGCAAGGACTCGACCACCAACTACGAGCTGGACAAGACGGTGCGCCACACCGAG
GCGCCGACGGGCGGCATCAAGCGGCTGTCGGTGGCGGTGGTGGTCAACAACCTGCCGGTGGTCGACGCCAAGGGCCACGT
GACGATGCAGCCGCTCACGGCCGACAAGCTCAAGCAGGTCGAGCAGCTCGTGAAGGACGCGATGGGCTACGACGCGAAGC
GCGGCGACTCGGTGAACGTGGTCAACAGCGTGTTCACCACCACGGCCGATCCGCTCGCCGACCTGCCGTGGTGGCGCCAG
CCCGACATGATCGCGCTGGCCAAGGACGCCGCGAAGTGGCTCGGCATCGCCGCCGCGGCCGCCGCGCTGTACTTCATGTT
CGTGCGCCCGGCCATGCGCCGCGCGTTCCCGCCGCCCGAGGCGGCGGTCGCCAACCCGGCGCTGGCAGCCGCGCTGGGCA
GCCCCGACGAGCCCGCGCTCGACGGCCTGCCGGCGCCCGACTCGGTGGTCGCCGAGGATTCGCCCGAAGCGGCGCTGCTG
GCCTTCGAGGCCGACAAGCACCGCTATGAACGCAACCTAGACTACGCGAAGATGATCGCTCGGCAGGATCCGAAGATCGT
CGCGGCGGTCGTCAAGAATTGGGTGTCCGATGAGCGCTGA

Upstream 100 bases:

>100_bases
GTTCACCGGATCGCCGCTGGACGCGGTCCGGATAATCCGATCCTGGTGTCATTGTCCGTCCGCTCGTCGAGCGGCAGCCC
GCTGTGGAGAACCCCGACGC

Downstream 100 bases:

>100_bases
AGGCCTGACCAAGAGCGCGCTGCTGCTGATGTCGATCGGCGAGGAAGAGGCGGCGCAGGTATTCAAGTTCCTGGCCCCGC
GCGAGGTCCAGAAGATCGGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MESQANSLINPDARNAVAGTSPNATAAAGTLPGAGAGGADFGMGGFAERFSGLPGMSRMRTNPKLPFLIITALAIAAIVA
LVLWSRAPDYRVLYSNLSDRDGGAIITALQQANIPYQFADAGGAILVPASQVHETRLRLAAMGLPKGGSVGFELMDNQKF
GISQFAEQVNYQRALEGELERTIASINAVRSARVHLAIPKPSVFVRDREAPSASVFVDLYPGRVLDDGQVLAITRMVASG
VPDMPAKNVTIVDQDGNLLSQQPSSSGLDANQLKYVQQVEHNTQKRIDAILAPMFGAGNTRSQVSADIDFTRSEQTSESY
APNGTQQQAAIRSQQTSSSVESAQSGAGGVPGALSNTPPQPASAPITGASGAAGTPPTPISDRKDSTTNYELDKTVRHTE
APTGGIKRLSVAVVVNNLPVVDAKGHVTMQPLTADKLKQVEQLVKDAMGYDAKRGDSVNVVNSVFTTTADPLADLPWWRQ
PDMIALAKDAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEAAVANPALAAALGSPDEPALDGLPAPDSVVAEDSPEAALL
AFEADKHRYERNLDYAKMIARQDPKIVAAVVKNWVSDER

Sequences:

>Translated_599_residues
MESQANSLINPDARNAVAGTSPNATAAAGTLPGAGAGGADFGMGGFAERFSGLPGMSRMRTNPKLPFLIITALAIAAIVA
LVLWSRAPDYRVLYSNLSDRDGGAIITALQQANIPYQFADAGGAILVPASQVHETRLRLAAMGLPKGGSVGFELMDNQKF
GISQFAEQVNYQRALEGELERTIASINAVRSARVHLAIPKPSVFVRDREAPSASVFVDLYPGRVLDDGQVLAITRMVASG
VPDMPAKNVTIVDQDGNLLSQQPSSSGLDANQLKYVQQVEHNTQKRIDAILAPMFGAGNTRSQVSADIDFTRSEQTSESY
APNGTQQQAAIRSQQTSSSVESAQSGAGGVPGALSNTPPQPASAPITGASGAAGTPPTPISDRKDSTTNYELDKTVRHTE
APTGGIKRLSVAVVVNNLPVVDAKGHVTMQPLTADKLKQVEQLVKDAMGYDAKRGDSVNVVNSVFTTTADPLADLPWWRQ
PDMIALAKDAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEAAVANPALAAALGSPDEPALDGLPAPDSVVAEDSPEAALL
AFEADKHRYERNLDYAKMIARQDPKIVAAVVKNWVSDER
>Mature_599_residues
MESQANSLINPDARNAVAGTSPNATAAAGTLPGAGAGGADFGMGGFAERFSGLPGMSRMRTNPKLPFLIITALAIAAIVA
LVLWSRAPDYRVLYSNLSDRDGGAIITALQQANIPYQFADAGGAILVPASQVHETRLRLAAMGLPKGGSVGFELMDNQKF
GISQFAEQVNYQRALEGELERTIASINAVRSARVHLAIPKPSVFVRDREAPSASVFVDLYPGRVLDDGQVLAITRMVASG
VPDMPAKNVTIVDQDGNLLSQQPSSSGLDANQLKYVQQVEHNTQKRIDAILAPMFGAGNTRSQVSADIDFTRSEQTSESY
APNGTQQQAAIRSQQTSSSVESAQSGAGGVPGALSNTPPQPASAPITGASGAAGTPPTPISDRKDSTTNYELDKTVRHTE
APTGGIKRLSVAVVVNNLPVVDAKGHVTMQPLTADKLKQVEQLVKDAMGYDAKRGDSVNVVNSVFTTTADPLADLPWWRQ
PDMIALAKDAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEAAVANPALAAALGSPDEPALDGLPAPDSVVAEDSPEAALL
AFEADKHRYERNLDYAKMIARQDPKIVAAVVKNWVSDER

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=575, Percent_Identity=45.5652173913043, Blast_Score=475, Evalue=1e-135,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 63208; Mature: 63208

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQANSLINPDARNAVAGTSPNATAAAGTLPGAGAGGADFGMGGFAERFSGLPGMSRMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHC
TNPKLPFLIITALAIAAIVALVLWSRAPDYRVLYSNLSDRDGGAIITALQQANIPYQFAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCEEEEC
AGGAILVPASQVHETRLRLAAMGLPKGGSVGFELMDNQKFGISQFAEQVNYQRALEGELE
CCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RTIASINAVRSARVHLAIPKPSVFVRDREAPSASVFVDLYPGRVLDDGQVLAITRMVASG
HHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEECCCCCHHHHHHHHCC
VPDMPAKNVTIVDQDGNLLSQQPSSSGLDANQLKYVQQVEHNTQKRIDAILAPMFGAGNT
CCCCCCCCEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RSQVSADIDFTRSEQTSESYAPNGTQQQAAIRSQQTSSSVESAQSGAGGVPGALSNTPPQ
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PASAPITGASGAAGTPPTPISDRKDSTTNYELDKTVRHTEAPTGGIKRLSVAVVVNNLPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCHHEEEEEEEECCCCE
VDAKGHVTMQPLTADKLKQVEQLVKDAMGYDAKRGDSVNVVNSVFTTTADPLADLPWWRQ
EECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
PDMIALAKDAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEAAVANPALAAALGSPDEPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHCCCCCCCCC
DGLPAPDSVVAEDSPEAALLAFEADKHRYERNLDYAKMIARQDPKIVAAVVKNWVSDER
CCCCCCCCCCCCCCCCEEEEEEECHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESQANSLINPDARNAVAGTSPNATAAAGTLPGAGAGGADFGMGGFAERFSGLPGMSRMR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHC
TNPKLPFLIITALAIAAIVALVLWSRAPDYRVLYSNLSDRDGGAIITALQQANIPYQFAD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEHHHCCCCEEEEC
AGGAILVPASQVHETRLRLAAMGLPKGGSVGFELMDNQKFGISQFAEQVNYQRALEGELE
CCCEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
RTIASINAVRSARVHLAIPKPSVFVRDREAPSASVFVDLYPGRVLDDGQVLAITRMVASG
HHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCEEEEEECCCEEECCCCCHHHHHHHHCC
VPDMPAKNVTIVDQDGNLLSQQPSSSGLDANQLKYVQQVEHNTQKRIDAILAPMFGAGNT
CCCCCCCCEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RSQVSADIDFTRSEQTSESYAPNGTQQQAAIRSQQTSSSVESAQSGAGGVPGALSNTPPQ
CCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PASAPITGASGAAGTPPTPISDRKDSTTNYELDKTVRHTEAPTGGIKRLSVAVVVNNLPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCHHEEEEEEEECCCCE
VDAKGHVTMQPLTADKLKQVEQLVKDAMGYDAKRGDSVNVVNSVFTTTADPLADLPWWRQ
EECCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
PDMIALAKDAAKWLGIAAAAAALYFMFVRPAMRRAFPPPEAAVANPALAAALGSPDEPAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHCCCCCCCCC
DGLPAPDSVVAEDSPEAALLAFEADKHRYERNLDYAKMIARQDPKIVAAVVKNWVSDER
CCCCCCCCCCCCCCCCEEEEEEECHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]