| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cusR [H]
Identifier: 238028833
GI number: 238028833
Start: 3755122
End: 3755799
Strand: Reverse
Name: cusR [H]
Synonym: bglu_1g32980
Alternate gene names: 238028833
Gene position: 3755799-3755122 (Counterclockwise)
Preceding gene: 238028835
Following gene: 238028832
Centisome position: 96.14
GC content: 66.96
Gene sequence:
>678_bases ATGTTTCGTGTCCTTACTATCGAAGACGATGAAATCACCGCGAATGAAATCGTTGGAGAACTGAAAGACCGTGGCTTCGC CGTGGAATGGGTGGCCAACGGCCGCGACGGCATGGCGCGCGCGCTCAGCGACGAATACGACGTGATCACGCTCGACCGGA TGCTGCCGGGCGTGGACGGCCTGACCATCGTCACCACCATGCGCAGCATCGGCGTGCGCACGCCGGTGCTGATGCTCAGC GCGCTCGGCGACGTGGACGAACGCGTGCGCGGGCTGCGCGCCGGCGGCGACGACTACCTGACCAAGCCGTTCGATCCCGA GGAGATGACGGCGCGCCTCGAGGTGCTGCTGCGGCGCAGCCAGGCCTCGCCCGCGCAGTCGGAAACCACGCTCGAGGTCG GCCCGCTCGCGCTCGACCTGATCGCGCGCAAGGCCACCCGCGACGGCGCGGAGATCGCGCTGCTGCCCACCGAATACCGC GTGCTCGAATACATGATGCGCAACGCCGGCCAGACCATCACGCGCACCATGCTGTTCGAGGCGGTGTGGGGCTATCACTT CGATCCCGGCACCAATCTGATCGACGTCCACATGGGGCGCCTGCGCAGGAAGATCGATCCGCCCGACGCGCCGCCGATGA TCCGCACCGTGCGCGGCGCCGGCTACATCCTTTCGTGA
Upstream 100 bases:
>100_bases CGCAGGACGGCCGCTCACCGCCCAGGCCGATATGGCAACATTGCCCTCTTTCCAACACGCATCGCCGGTGCCGCCTCCGC TCGCGGCCGGCGGGACGACA
Downstream 100 bases:
>100_bases GCGGCCGATCGTGACTGAACCGGCAAGCCGCGCGTGCGCCGGGCCGCGCTGGTATTCGAGCACGTTCCGGCTGTTCGTCC TCTACTCGGTGATGTTCTCG
Product: DNA-binding response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MFRVLTIEDDEITANEIVGELKDRGFAVEWVANGRDGMARALSDEYDVITLDRMLPGVDGLTIVTTMRSIGVRTPVLMLS ALGDVDERVRGLRAGGDDYLTKPFDPEEMTARLEVLLRRSQASPAQSETTLEVGPLALDLIARKATRDGAEIALLPTEYR VLEYMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRRKIDPPDAPPMIRTVRGAGYILS
Sequences:
>Translated_225_residues MFRVLTIEDDEITANEIVGELKDRGFAVEWVANGRDGMARALSDEYDVITLDRMLPGVDGLTIVTTMRSIGVRTPVLMLS ALGDVDERVRGLRAGGDDYLTKPFDPEEMTARLEVLLRRSQASPAQSETTLEVGPLALDLIARKATRDGAEIALLPTEYR VLEYMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRRKIDPPDAPPMIRTVRGAGYILS >Mature_225_residues MFRVLTIEDDEITANEIVGELKDRGFAVEWVANGRDGMARALSDEYDVITLDRMLPGVDGLTIVTTMRSIGVRTPVLMLS ALGDVDERVRGLRAGGDDYLTKPFDPEEMTARLEVLLRRSQASPAQSETTLEVGPLALDLIARKATRDGAEIALLPTEYR VLEYMMRNAGQTITRTMLFEAVWGYHFDPGTNLIDVHMGRLRRKIDPPDAPPMIRTVRGAGYILS
Specific function: Member of the two-component regulatory system CusS/CusR. Activates the expression of cusCFBA in response to increasing levels of copper ions, and probably silver ions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=42.3423423423423, Blast_Score=181, Evalue=3e-47, Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=40.4545454545455, Blast_Score=171, Evalue=4e-44, Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=41.2556053811659, Blast_Score=157, Evalue=7e-40, Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=34.8017621145374, Blast_Score=132, Evalue=1e-32, Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=34.5291479820628, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=33.6244541484716, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=31.8385650224215, Blast_Score=117, Evalue=4e-28, Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=35.6521739130435, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=33.1838565022422, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=32.2869955156951, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=28.82096069869, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=26.5217391304348, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=27.7310924369748, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=31.4814814814815, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25036; Mature: 25036
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVLTIEDDEITANEIVGELKDRGFAVEWVANGRDGMARALSDEYDVITLDRMLPGVDG CEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCEEEHHHHCCCCCC LTIVTTMRSIGVRTPVLMLSALGDVDERVRGLRAGGDDYLTKPFDPEEMTARLEVLLRRS HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QASPAQSETTLEVGPLALDLIARKATRDGAEIALLPTEYRVLEYMMRNAGQTITRTMLFE CCCCCCCCCEEEECHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHH AVWGYHFDPGTNLIDVHMGRLRRKIDPPDAPPMIRTVRGAGYILS HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECC >Mature Secondary Structure MFRVLTIEDDEITANEIVGELKDRGFAVEWVANGRDGMARALSDEYDVITLDRMLPGVDG CEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCEEEHHHHCCCCCC LTIVTTMRSIGVRTPVLMLSALGDVDERVRGLRAGGDDYLTKPFDPEEMTARLEVLLRRS HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH QASPAQSETTLEVGPLALDLIARKATRDGAEIALLPTEYRVLEYMMRNAGQTITRTMLFE CCCCCCCCCEEEECHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHH AVWGYHFDPGTNLIDVHMGRLRRKIDPPDAPPMIRTVRGAGYILS HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]