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The map label for this gene is omp32 [H]

Identifier: 238028801

GI number: 238028801

Start: 3716400

End: 3717467

Strand: Reverse

Name: omp32 [H]

Synonym: bglu_1g32650

Alternate gene names: 238028801

Gene position: 3717467-3716400 (Counterclockwise)

Preceding gene: 238028802

Following gene: 238028800

Centisome position: 95.16

GC content: 67.04

Gene sequence:

>1068_bases
ATGAAGTCACTCGCTCGCCGGACTGCGTCCGGTGCCTTCGCCTGCCTCGCGTGGGCGGCACTCGCGGCGCCCGCTCACGC
GCAATCGAGCATCCAGCTCTACGGCCAGGTCGATGCCTGGGTGGGCGCGCAGAAATTCCCGGGCGGCGAGCGCGCCTGGG
GCGTGCAGGGCGGCGGCATGTCGACCTCGTACTGGGGCCTGCGCGGCACCGAGGATCTCGGCGGCGGCTACCGCGCGATC
TTCACGATCGAGGATTTCTTCCGGCCGCAGAGCGGCAGCTACGGCCGCTTCCAGGGCGACACGTTCTTCGCGCGCAATGC
CTATGTCGGCCTCGAGACGCCCTACGGCACGGTGCGCGCGGGGCGCCTCACGACCCACCTGTTCCTCTCGACGATCCTGT
TCAACCCGCTGATCGACTCCTACGAATTCTCGCCGATGGTCTATCACGTGTTCCTCGGGCTCGGCACCTTCCCGACCTAC
ACGACCGACCAGGGCGTGGTGGGCGATTCGGGCTGGAACAACGCGGTGTCGTACACGACGCCCGACTTCAACGGCTTCAA
CGCGAGTGCGATGTACGCGCTCGGCAATCAGTCCGGCGGCAACGCCGCGAAGAAATGGAGCGGCCAGCTGCAGTATTTCC
GCGGCCCGCTCGCGATGACCGCCGTGTACCAATATGTGAACTTCAACAACGCGCCGGGCGATCTCGGCTCGCTGGTGGCC
GGCATGAAGAGCCAGAGCGTCACGCAGCTCGGCATCAGCTATGACCTGAAGTTCGCGAAGCTGTACGGGCAGTACATGTA
TACGAAAAACGACCTGCAGGGCGGCAGCTGGCACGTGAACACCGCGCAGGGCGGCGTGTCGGTGCCGCTCGGCGCGGGCA
GCGCGCTGGCCTCGTATGCGTACTCGCGCGACACGGGCGGGCTCGACCAGACGCGTCAGACCTGGGCGGTCGGCTACGAC
TATCCGCTGTCGAAGCGCACCGACCTCTACGCCGCCTACCTGCTCGACCGCCTGTCGAACCAGTCGAGCGGCGACACGCT
CGGCGCCGGCATGCGGGTGCGATTCTGA

Upstream 100 bases:

>100_bases
CAGTTTATCGGCCCGCGAAGATGGCCTAGCCTCGTCCATGCGCACGCCCTCGCCTCGACCCGGCGCGCATCGCTTCCATT
CGATTTGATTCGGAGATCTC

Downstream 100 bases:

>100_bases
GCGTTGCCCCGAGCGCGCCGCGCGGACGGCGCGCCGCGCGATGCCCGGCGCGGAACCGGCGCCGGGCGCGTCCATAAAAC
GACGTTTTGCGTTTGTTGAC

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKSLARRTASGAFACLAWAALAAPAHAQSSIQLYGQVDAWVGAQKFPGGERAWGVQGGGMSTSYWGLRGTEDLGGGYRAI
FTIEDFFRPQSGSYGRFQGDTFFARNAYVGLETPYGTVRAGRLTTHLFLSTILFNPLIDSYEFSPMVYHVFLGLGTFPTY
TTDQGVVGDSGWNNAVSYTTPDFNGFNASAMYALGNQSGGNAAKKWSGQLQYFRGPLAMTAVYQYVNFNNAPGDLGSLVA
GMKSQSVTQLGISYDLKFAKLYGQYMYTKNDLQGGSWHVNTAQGGVSVPLGAGSALASYAYSRDTGGLDQTRQTWAVGYD
YPLSKRTDLYAAYLLDRLSNQSSGDTLGAGMRVRF

Sequences:

>Translated_355_residues
MKSLARRTASGAFACLAWAALAAPAHAQSSIQLYGQVDAWVGAQKFPGGERAWGVQGGGMSTSYWGLRGTEDLGGGYRAI
FTIEDFFRPQSGSYGRFQGDTFFARNAYVGLETPYGTVRAGRLTTHLFLSTILFNPLIDSYEFSPMVYHVFLGLGTFPTY
TTDQGVVGDSGWNNAVSYTTPDFNGFNASAMYALGNQSGGNAAKKWSGQLQYFRGPLAMTAVYQYVNFNNAPGDLGSLVA
GMKSQSVTQLGISYDLKFAKLYGQYMYTKNDLQGGSWHVNTAQGGVSVPLGAGSALASYAYSRDTGGLDQTRQTWAVGYD
YPLSKRTDLYAAYLLDRLSNQSSGDTLGAGMRVRF
>Mature_355_residues
MKSLARRTASGAFACLAWAALAAPAHAQSSIQLYGQVDAWVGAQKFPGGERAWGVQGGGMSTSYWGLRGTEDLGGGYRAI
FTIEDFFRPQSGSYGRFQGDTFFARNAYVGLETPYGTVRAGRLTTHLFLSTILFNPLIDSYEFSPMVYHVFLGLGTFPTY
TTDQGVVGDSGWNNAVSYTTPDFNGFNASAMYALGNQSGGNAAKKWSGQLQYFRGPLAMTAVYQYVNFNNAPGDLGSLVA
GMKSQSVTQLGISYDLKFAKLYGQYMYTKNDLQGGSWHVNTAQGGVSVPLGAGSALASYAYSRDTGGLDQTRQTWAVGYD
YPLSKRTDLYAAYLLDRLSNQSSGDTLGAGMRVRF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38334; Mature: 38334

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLARRTASGAFACLAWAALAAPAHAQSSIQLYGQVDAWVGAQKFPGGERAWGVQGGGM
CCHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEEECCCCC
STSYWGLRGTEDLGGGYRAIFTIEDFFRPQSGSYGRFQGDTFFARNAYVGLETPYGTVRA
CCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEC
GRLTTHLFLSTILFNPLIDSYEFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAVSYTT
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEC
PDFNGFNASAMYALGNQSGGNAAKKWSGQLQYFRGPLAMTAVYQYVNFNNAPGDLGSLVA
CCCCCCCCEEEEEECCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
GMKSQSVTQLGISYDLKFAKLYGQYMYTKNDLQGGSWHVNTAQGGVSVPLGAGSALASYA
HCCCCCCEEECCEECHHHHHHHHHHHEECCCCCCCCEEEEECCCCEEECCCCCHHHHHHH
YSRDTGGLDQTRQTWAVGYDYPLSKRTDLYAAYLLDRLSNQSSGDTLGAGMRVRF
HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKSLARRTASGAFACLAWAALAAPAHAQSSIQLYGQVDAWVGAQKFPGGERAWGVQGGGM
CCHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEEECCCCC
STSYWGLRGTEDLGGGYRAIFTIEDFFRPQSGSYGRFQGDTFFARNAYVGLETPYGTVRA
CCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEC
GRLTTHLFLSTILFNPLIDSYEFSPMVYHVFLGLGTFPTYTTDQGVVGDSGWNNAVSYTT
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEC
PDFNGFNASAMYALGNQSGGNAAKKWSGQLQYFRGPLAMTAVYQYVNFNNAPGDLGSLVA
CCCCCCCCEEEEEECCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH
GMKSQSVTQLGISYDLKFAKLYGQYMYTKNDLQGGSWHVNTAQGGVSVPLGAGSALASYA
HCCCCCCEEECCEECHHHHHHHHHHHEECCCCCCCCEEEEECCCCEEECCCCCHHHHHHH
YSRDTGGLDQTRQTWAVGYDYPLSKRTDLYAAYLLDRLSNQSSGDTLGAGMRVRF
HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]