| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028778
Identifier: 238028778
GI number: 238028778
Start: 3681787
End: 3683028
Strand: Direct
Name: 238028778
Synonym: bglu_1g32420
Alternate gene names: NA
Gene position: 3681787-3683028 (Clockwise)
Preceding gene: 238028777
Following gene: 238028779
Centisome position: 94.25
GC content: 71.42
Gene sequence:
>1242_bases ATGGTGTCGAACAAGGTGTTTGCAGGTTGGATCGCGGCATGCGTGCTGTCGGCCGCCCAGGCCGGCACCCTGGCACCGCC GGCGGGCACGGCCGATGCTGCCCCGCGCGCGGCCGGTTCGCTGGCCGCCGAGCGTTTCGACTACGACGAACCCGGCCTGC CGCAGGTCACGGCCGACATGAACGAGCAGATCATCCGGATCCCCGTCGAGGGCGATGCCGGCGTGACGCTCGAGGCCACC GTCTACAAGCCGAACGGCCCCGGGCCGTTCCCGCTCGTCGTCTTCAATCACGGCAAGAATCCCGGCGACCTGCACGAGCA GCCGCGCAGCCGGCCGCTGGCGTTCGCGCGCGAATTCGTGCGGCGCGGCTACGCCGTGGTGGCGCCGAACCGCGAGGGCT TCGCGGGCTCGGGCGGCAGCTACGTGCAGGAAGGCTGCGACGTCGAACGCAACGGCATGGCGCAGGCGCGCGACGTCGGC TCGACGGTGGCCTACATGTCCAGGCTGCCCTACGTGGACGCGAGCCGCATCGTGGTGGCCGGCACCTCGCACGGCGGGCT CGTCTCGCTCGCCTACGGCACGGTGGCCGCCAAGGGCGTGCGCGGCATCATCAACTTCTCCGGCGGGCTGCGCCAGGATC TCTGCGAAGGCTGGCAGAAGACGCTGGTGGGCGCGTTCAACACCTACGGCAAGGAAACCCGCGTGCCGTCGCTGTGGCTG TACGGCGACAACGATTCGGTCTGGTCGCCGGCGCTCGTCGAGCAACTGCGCGAGGCCTACGTGTCGCATGGCGCGAGCAC GCTGTTCGTCGACTACGGCATCTACAAGGACGACGCGCACCGGCTGATCGTCGATCGCGACGGCGTGCCGGTCTGGTGGC CGTCCGTCAACGCGTTCCTGGCCGAGCTGCACCTGCCCACCAAGGTGCTCTACGCGGTGGCCTGCCCGCACCCGCCGTCG GCCTCCGGCTACGCGTCGATCGACGCCGTCAACGCGGTGCCCTACCTCGACGCGGCGGGCCGCGAAGGCTACCGCCACTT CCTGAACCAGCATCCGAGCCGCGCCTTCGCCGTGTCGGCCGAGGGCGCGTGGTCCTGGGCCGAGGGCGGCGACGACCCGA TGGCGCTCGCGCTCGAGAACTGCCGCAAGCAGGGCGCCGGCGCTTGCCGGCTCTACGCCGTGGACAACCACGTGGTCTGG CGCGGCGACGGCGCCGACGCGCACGCGCTGGCGAGCCGCTGA
Upstream 100 bases:
>100_bases GCCGACGCGGCCGGGGCCGGGTTATTCCCGCATTGCACAAGCCGATTGTGTCGGGCTAGGATGGATCCGGTTTCAAGCGC AACGGGCTCCGGGTCACGGC
Downstream 100 bases:
>100_bases CGGCCCGGCCCTGCCTGTCGAACCGGCCGCCCGGGCACACCGCCAGCTTCGCCTTGCTCGCCCACCTCGTTCGCGCCCGT TGGCCCGCGCCACGCACTGC
Product: dienelactone hydrolase
Products: NA
Alternate protein names: Signal Peptide Protein; Dipeptidyl Aminopeptidase/Acylaminoacyl-Peptidase; Dienelactone Hydrolase And Related S-Like Protein; Dienelactone Hydrolase-Like; Acylamino-Acid-Releasing; Dipeptidyl; Dienelactone Hydrolase And Related S Protein; Subfamily S9C Unassigned Peptidase; Dienelactone Hydrolase-Like Protein; Lipoprotein
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MVSNKVFAGWIAACVLSAAQAGTLAPPAGTADAAPRAAGSLAAERFDYDEPGLPQVTADMNEQIIRIPVEGDAGVTLEAT VYKPNGPGPFPLVVFNHGKNPGDLHEQPRSRPLAFAREFVRRGYAVVAPNREGFAGSGGSYVQEGCDVERNGMAQARDVG STVAYMSRLPYVDASRIVVAGTSHGGLVSLAYGTVAAKGVRGIINFSGGLRQDLCEGWQKTLVGAFNTYGKETRVPSLWL YGDNDSVWSPALVEQLREAYVSHGASTLFVDYGIYKDDAHRLIVDRDGVPVWWPSVNAFLAELHLPTKVLYAVACPHPPS ASGYASIDAVNAVPYLDAAGREGYRHFLNQHPSRAFAVSAEGAWSWAEGGDDPMALALENCRKQGAGACRLYAVDNHVVW RGDGADAHALASR
Sequences:
>Translated_413_residues MVSNKVFAGWIAACVLSAAQAGTLAPPAGTADAAPRAAGSLAAERFDYDEPGLPQVTADMNEQIIRIPVEGDAGVTLEAT VYKPNGPGPFPLVVFNHGKNPGDLHEQPRSRPLAFAREFVRRGYAVVAPNREGFAGSGGSYVQEGCDVERNGMAQARDVG STVAYMSRLPYVDASRIVVAGTSHGGLVSLAYGTVAAKGVRGIINFSGGLRQDLCEGWQKTLVGAFNTYGKETRVPSLWL YGDNDSVWSPALVEQLREAYVSHGASTLFVDYGIYKDDAHRLIVDRDGVPVWWPSVNAFLAELHLPTKVLYAVACPHPPS ASGYASIDAVNAVPYLDAAGREGYRHFLNQHPSRAFAVSAEGAWSWAEGGDDPMALALENCRKQGAGACRLYAVDNHVVW RGDGADAHALASR >Mature_413_residues MVSNKVFAGWIAACVLSAAQAGTLAPPAGTADAAPRAAGSLAAERFDYDEPGLPQVTADMNEQIIRIPVEGDAGVTLEAT VYKPNGPGPFPLVVFNHGKNPGDLHEQPRSRPLAFAREFVRRGYAVVAPNREGFAGSGGSYVQEGCDVERNGMAQARDVG STVAYMSRLPYVDASRIVVAGTSHGGLVSLAYGTVAAKGVRGIINFSGGLRQDLCEGWQKTLVGAFNTYGKETRVPSLWL YGDNDSVWSPALVEQLREAYVSHGASTLFVDYGIYKDDAHRLIVDRDGVPVWWPSVNAFLAELHLPTKVLYAVACPHPPS ASGYASIDAVNAVPYLDAAGREGYRHFLNQHPSRAFAVSAEGAWSWAEGGDDPMALALENCRKQGAGACRLYAVDNHVVW RGDGADAHALASR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43999; Mature: 43999
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSNKVFAGWIAACVLSAAQAGTLAPPAGTADAAPRAAGSLAAERFDYDEPGLPQVTADM CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCC NEQIIRIPVEGDAGVTLEATVYKPNGPGPFPLVVFNHGKNPGDLHEQPRSRPLAFAREFV CCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHCCCCCHHHHHHHHH RRGYAVVAPNREGFAGSGGSYVQEGCDVERNGMAQARDVGSTVAYMSRLPYVDASRIVVA HCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE GTSHGGLVSLAYGTVAAKGVRGIINFSGGLRQDLCEGWQKTLVGAFNTYGKETRVPSLWL ECCCCCEEEEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YGDNDSVWSPALVEQLREAYVSHGASTLFVDYGIYKDDAHRLIVDRDGVPVWWPSVNAFL ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEECCCCEEEEECCCCEEECCCHHHHH AELHLPTKVLYAVACPHPPSASGYASIDAVNAVPYLDAAGREGYRHFLNQHPSRAFAVSA HHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC EGAWSWAEGGDDPMALALENCRKQGAGACRLYAVDNHVVWRGDGADAHALASR CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCHHHCCC >Mature Secondary Structure MVSNKVFAGWIAACVLSAAQAGTLAPPAGTADAAPRAAGSLAAERFDYDEPGLPQVTADM CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCC NEQIIRIPVEGDAGVTLEATVYKPNGPGPFPLVVFNHGKNPGDLHEQPRSRPLAFAREFV CCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHCCCCCHHHHHHHHH RRGYAVVAPNREGFAGSGGSYVQEGCDVERNGMAQARDVGSTVAYMSRLPYVDASRIVVA HCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEE GTSHGGLVSLAYGTVAAKGVRGIINFSGGLRQDLCEGWQKTLVGAFNTYGKETRVPSLWL ECCCCCEEEEEHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YGDNDSVWSPALVEQLREAYVSHGASTLFVDYGIYKDDAHRLIVDRDGVPVWWPSVNAFL ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEECCCCEEEEECCCCEEECCCHHHHH AELHLPTKVLYAVACPHPPSASGYASIDAVNAVPYLDAAGREGYRHFLNQHPSRAFAVSA HHHCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC EGAWSWAEGGDDPMALALENCRKQGAGACRLYAVDNHVVWRGDGADAHALASR CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA