| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028750
Identifier: 238028750
GI number: 238028750
Start: 3649378
End: 3650328
Strand: Reverse
Name: 238028750
Synonym: bglu_1g32140
Alternate gene names: NA
Gene position: 3650328-3649378 (Counterclockwise)
Preceding gene: 238028751
Following gene: 238028749
Centisome position: 93.44
GC content: 70.66
Gene sequence:
>951_bases ATGGAAAACAAGTCACATGCGTTCTGGGCCGGCCTCTTCGCCATCGGCCTGCTGCTCGCGATCGTCGCGGTCGTGTTCTG GTTCAACGTCGACCGCACGGTGCGAATCCCGTACGACCTCGTCGCGCGCACCAACGTCACCGGCCTGTATCCGGACGCGG ACGTGCGCTATCGCGGGCTCGACGTCGGCAAGGTCGCCTCGATCCACTTCGACCATGCGCACCCGGGCGAGATCTCGATC CGCATCCTGGTCGACCACGACGCGCCGATCACGCGCTCGACGTTCGGCACGCTCGGCTTCCAGGGCGTGACGGGCATCGC GTTCGTGCAGCTCGACGACACCGGCCACGATCTCGCGCCGCTGCCCAGCTCGAGCAAGGCGGTCGCGCAGATCCCGCTGC ATCCGAGCCTGTTCGACCAGCTCCAGCAGCGCGGCGACGTGCTGCTCAAGCAGTTCGAGGTGGCCGCCAGCAGCGTCAAC GCGCTGCTCTCGCCCGAGATGCGCGAGCAGTTGCGCGCCACCGTGGCGAGCATGCAGCAGGCCGCCGACGGCGTGACCAC GCTGACCCGATCGCTCGAGCCCGTCACCGCGCAGCTGCCCGAGACCACCCGCCGCCTGAACCGGGCGCTCGCCTCGGCCG ACGCGCTGATCGCGCCGAACGGGCCGGTGGCCGTGAACCTGGACCGCGCCGGCAAGGCGGCCGAACAGGCGGGAACTGCG CTCGCCTCGATGGATCAGACGCTGTCCGAACTGAACGCGAGCGTGCGCTACGAAACGCTGCCGCGCGTGAATTCGCTGAG CTCGAACCTTGGCGACACCTCGCGCACGGTGCGCGAGGTGGCCGGCGAGATCGGCCGCAACCCGCGCAGCCTGCTGTTCG GCACCAGCGCCGGCTTGCCGGGGCCGGGCGAGCCGGGCTTCGCGTGGCCGCCGGCCGCCCCCGCGCACTGA
Upstream 100 bases:
>100_bases CGCGCTGCAGGCGCTGCCGCCGGAGCGGCGCGCGACGCTGCCGAAGGCCGCACTCGAACCGGCGCTGTCCAGCGTCGAGC TGTAACAGAGGGAATCGCGA
Downstream 100 bases:
>100_bases GCCCGCGCGGCGCCAGGCGGGCGGCGGCCTTGCGGCTGCCGGCCGGCGCGGCGGCCCGGCCGGCGCGCGCGAGAGGCGCG GCCGCGCCGGCATGACAGGA
Product: Mce-like protein
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; ABC-Type Transporter Periplasmic Component; Mce Related Family; Mce Family Protein; ABC-Type Transport System Periplasmic Component LinM; ABC Transporter Permease; Signal Peptide Protein; Periplasmic Protein; Exported Protein
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIPYDLVARTNVTGLYPDADVRYRGLDVGKVASIHFDHAHPGEISI RILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHDLAPLPSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVN ALLSPEMREQLRATVASMQQAADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTA LASMDQTLSELNASVRYETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAGLPGPGEPGFAWPPAAPAH
Sequences:
>Translated_316_residues MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIPYDLVARTNVTGLYPDADVRYRGLDVGKVASIHFDHAHPGEISI RILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHDLAPLPSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVN ALLSPEMREQLRATVASMQQAADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTA LASMDQTLSELNASVRYETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAGLPGPGEPGFAWPPAAPAH >Mature_316_residues MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIPYDLVARTNVTGLYPDADVRYRGLDVGKVASIHFDHAHPGEISI RILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHDLAPLPSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVN ALLSPEMREQLRATVASMQQAADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTA LASMDQTLSELNASVRYETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAGLPGPGEPGFAWPPAAPAH
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33667; Mature: 33667
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIPYDLVARTNVTGLYPDADVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCEECCCCCCEEECC DVGKVASIHFDHAHPGEISIRILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHDLAP CCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCC LPSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVNALLSPEMREQLRATVASMQQ CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTA HHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHH LASMDQTLSELNASVRYETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAGLP HHHHHHHHHHHHHHCEEHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEECCCCCC GPGEPGFAWPPAAPAH CCCCCCCCCCCCCCCC >Mature Secondary Structure MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIPYDLVARTNVTGLYPDADVRYRGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCEECCCCCCEEECC DVGKVASIHFDHAHPGEISIRILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHDLAP CCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCC LPSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVNALLSPEMREQLRATVASMQQ CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTA HHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCEEECCCCCEEEEECCCCCHHHHHHHH LASMDQTLSELNASVRYETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAGLP HHHHHHHHHHHHHHCEEHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEECCCCCC GPGEPGFAWPPAAPAH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA