| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028749
Identifier: 238028749
GI number: 238028749
Start: 3648522
End: 3649166
Strand: Reverse
Name: 238028749
Synonym: bglu_1g32130
Alternate gene names: NA
Gene position: 3649166-3648522 (Counterclockwise)
Preceding gene: 238028750
Following gene: 238028748
Centisome position: 93.41
GC content: 74.73
Gene sequence:
>645_bases ATGCAGGAATCCGCGATGTCACGCTTCACCGTTGTTTACGCCCGCCGCGCGGCGCTCGCCGGCACCGCGTTCGTGCTGGC GCTGCTCGCCGGCTGCGCGAGCGATGCGGCCCGGATGTCCGACATCCGCTACGACCTCGGCCCGATCGATCCCTCGGCGT TCGTCGCCGCGCCGGCCTCGGGCACGGTGCTCACGGTGCCCGACATGCGCGCCCCCGACGCGTTCGACACCGACAAGTTC GCCTACCGGCTCGCCTATGCGGATGCACAGCGCATCGCCGCCTACCGCGACAGCCGCTGGACCGCGCCGCCGGCGCAACT GCTCACGCAGCGGCTGCGCGCGGCGCTGGCCTCGCACGGCACCGTGCTCGACGGCGGCGACGCGGTGCGCGCCCCCGTGC TGCACGTCGAGCTCGACGAGTTCGAGCAGGTGTTCGACGGCCAGGACCAGAGCCATGGCGAGGTGGCGGTGCGTGCCACG CTCACGCGCCAGGGCACCGTGCTCGGCCAGCGCAGCTTCGTGTCGCGCGCGCCGGCCCGCACGCCCGACGCGGCGGGCGG CGCGGCCGCGCTGGCCGCCGCCAGCAACGAGCTCGTCGGGCAGCTGGTGGCATGGCTCGCGGTGCAGGCCAGCGCCTCGC CATGA
Upstream 100 bases:
>100_bases GGCGCCGCAACCGGGCGGCCGCGGCACCGGGGCAGCCGGCGCGGCGCGCGGCGGCGCCTGTTTCACGAGGCTTCGGCCAC CCGCTTACGAGATCACGACC
Downstream 100 bases:
>100_bases CGCGCGCGGCGCCGGCCACGACCCTGCTGCGGCCGCGATGACGGCCGGCGCGTCGCCGCCGCGAGCCGCGCCCCATGCCT CGTCGCTCGGGCGGCGGCTG
Product: ABC transporterauxiliary component-like protein
Products: NA
Alternate protein names: ABC-Type Transport System Auxiliary Component-Like Protein; Transcriptional Regulator; ABC-Type Transporter Auxiliary Component; ABC-Type Transport System Auxiliary Component
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MQESAMSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPASGTVLTVPDMRAPDAFDTDKF AYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHGTVLDGGDAVRAPVLHVELDEFEQVFDGQDQSHGEVAVRAT LTRQGTVLGQRSFVSRAPARTPDAAGGAAALAAASNELVGQLVAWLAVQASASP
Sequences:
>Translated_214_residues MQESAMSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPASGTVLTVPDMRAPDAFDTDKF AYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHGTVLDGGDAVRAPVLHVELDEFEQVFDGQDQSHGEVAVRAT LTRQGTVLGQRSFVSRAPARTPDAAGGAAALAAASNELVGQLVAWLAVQASASP >Mature_214_residues MQESAMSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPASGTVLTVPDMRAPDAFDTDKF AYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHGTVLDGGDAVRAPVLHVELDEFEQVFDGQDQSHGEVAVRAT LTRQGTVLGQRSFVSRAPARTPDAAGGAAALAAASNELVGQLVAWLAVQASASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22458; Mature: 22458
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQESAMSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC GTVLTVPDMRAPDAFDTDKFAYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHG CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC TVLDGGDAVRAPVLHVELDEFEQVFDGQDQSHGEVAVRATLTRQGTVLGQRSFVSRAPAR CEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC TPDAAGGAAALAAASNELVGQLVAWLAVQASASP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQESAMSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC GTVLTVPDMRAPDAFDTDKFAYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHG CCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC TVLDGGDAVRAPVLHVELDEFEQVFDGQDQSHGEVAVRATLTRQGTVLGQRSFVSRAPAR CEEECCCCCCCCEEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC TPDAAGGAAALAAASNELVGQLVAWLAVQASASP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA