| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028706
Identifier: 238028706
GI number: 238028706
Start: 3603488
End: 3603922
Strand: Reverse
Name: 238028706
Synonym: bglu_1g31700
Alternate gene names: NA
Gene position: 3603922-3603488 (Counterclockwise)
Preceding gene: 238028707
Following gene: 238028705
Centisome position: 92.25
GC content: 65.29
Gene sequence:
>435_bases ATGGACTGGCTCATCAAACGCAACTGTTCGGTGTCGCCGCGCCAGTTCGTTGCGTGTTACGCATCGCTGGCCGCTTTCTC GCTTGCGATCGCCGCGCTGCTGTCGTGGCGCGGTGCCTGGCTCGTGCTGCCGTTCACCGGGGTCGAGCTACTGGCAGTCG GCGTGGCATTCACGCTGTACGCACGCCATGCAGTCGATTACGAACGTATCAGGCTGTTTCCTCATCGGCTCCTGATCGAG CAGATGAGTGCGGAACGGCTGACGTGCTTCGAGTTCAATCCGCGCTGGGTGCGGGTCGAGCCCGGCGCGTCGCCGCGCGA TCCGGTGCGGGTCGTGTGCCGGGGGCAGAGCGTCGTGGTCGGGCAGCATCTCGCGCAGTATCGGCGCGCCCAGTTCGCTC ATGAATTGCGTGCGTGGCTGATGCGCTGCGGCTGA
Upstream 100 bases:
>100_bases AATACAGGTCGGCAGGCCCGGTTCGGGCCAGCTTCGATGCCGATCGCGAGAGGCAGCGATGGATGGAACGATGGGTTTCA CGGACACCGAAACAGTCCTG
Downstream 100 bases:
>100_bases TCGAGGCGGCCGCGGCGTGGGGCCGGCGGCGGGGAGGGTAGGAATGACAATTTTGGGTAAGGAAGCCATGAAAACAATCA AGCGCGCCCTCACTGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG
Sequences:
>Translated_144_residues MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG >Mature_144_residues MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16489; Mature: 16489
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH ARHAVDYERIRLFPHRLLIEQMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVV HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCEEHH GQHLAQYRRAQFAHELRAWLMRCG HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH ARHAVDYERIRLFPHRLLIEQMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVV HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCEEHH GQHLAQYRRAQFAHELRAWLMRCG HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA