Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028706

Identifier: 238028706

GI number: 238028706

Start: 3603488

End: 3603922

Strand: Reverse

Name: 238028706

Synonym: bglu_1g31700

Alternate gene names: NA

Gene position: 3603922-3603488 (Counterclockwise)

Preceding gene: 238028707

Following gene: 238028705

Centisome position: 92.25

GC content: 65.29

Gene sequence:

>435_bases
ATGGACTGGCTCATCAAACGCAACTGTTCGGTGTCGCCGCGCCAGTTCGTTGCGTGTTACGCATCGCTGGCCGCTTTCTC
GCTTGCGATCGCCGCGCTGCTGTCGTGGCGCGGTGCCTGGCTCGTGCTGCCGTTCACCGGGGTCGAGCTACTGGCAGTCG
GCGTGGCATTCACGCTGTACGCACGCCATGCAGTCGATTACGAACGTATCAGGCTGTTTCCTCATCGGCTCCTGATCGAG
CAGATGAGTGCGGAACGGCTGACGTGCTTCGAGTTCAATCCGCGCTGGGTGCGGGTCGAGCCCGGCGCGTCGCCGCGCGA
TCCGGTGCGGGTCGTGTGCCGGGGGCAGAGCGTCGTGGTCGGGCAGCATCTCGCGCAGTATCGGCGCGCCCAGTTCGCTC
ATGAATTGCGTGCGTGGCTGATGCGCTGCGGCTGA

Upstream 100 bases:

>100_bases
AATACAGGTCGGCAGGCCCGGTTCGGGCCAGCTTCGATGCCGATCGCGAGAGGCAGCGATGGATGGAACGATGGGTTTCA
CGGACACCGAAACAGTCCTG

Downstream 100 bases:

>100_bases
TCGAGGCGGCCGCGGCGTGGGGCCGGCGGCGGGGAGGGTAGGAATGACAATTTTGGGTAAGGAAGCCATGAAAACAATCA
AGCGCGCCCTCACTGGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE
QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG

Sequences:

>Translated_144_residues
MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE
QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG
>Mature_144_residues
MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLYARHAVDYERIRLFPHRLLIE
QMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVVGQHLAQYRRAQFAHELRAWLMRCG

Specific function: Unknown

COG id: COG5488

COG function: function code S; Integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16489; Mature: 16489

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
ARHAVDYERIRLFPHRLLIEQMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVV
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCEEHH
GQHLAQYRRAQFAHELRAWLMRCG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWLIKRNCSVSPRQFVACYASLAAFSLAIAALLSWRGAWLVLPFTGVELLAVGVAFTLY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHH
ARHAVDYERIRLFPHRLLIEQMSAERLTCFEFNPRWVRVEPGASPRDPVRVVCRGQSVVV
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCEEHH
GQHLAQYRRAQFAHELRAWLMRCG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA