Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028697

Identifier: 238028697

GI number: 238028697

Start: 3596248

End: 3596955

Strand: Reverse

Name: 238028697

Synonym: bglu_1g31610

Alternate gene names: NA

Gene position: 3596955-3596248 (Counterclockwise)

Preceding gene: 238028698

Following gene: 238028696

Centisome position: 92.08

GC content: 69.92

Gene sequence:

>708_bases
GTGTCGACCCAGCCTTCCCGTCCGACGCCGGCCCGGCCTAGTCCCGACCACTCGCCTGACCGCCCGTCCGGCCAGGGTGG
AACGGGTCGCGACCCCCATTCTGAGCGCGACACATCGTCGCAGCGCGGCTCGTGGCGCCGCGGGCGCTGGGTGGTGCTCG
CGCTGTGCCTGATCTGCGCGGCGCCGCTCATCGCCTCCTACTTCACCTACTACGTGATCAAGCCCCGCGGCGCTTCGACC
AACTACGGCACGCTGATCGAGCCGCAGCGGCCGATCCCCGCCACGCTCACGGCGACCGACGAAAACGGCCGAACCGTGGC
GCTCGCCTCGCTGCGCGGGGTCTGGCTGCTCATGATGGAAAACGGCAGTTTGTGCGATGATGCGTGCGCCCGGAAGCTGT
ACTTCATGCGGCAGGTCCGCGCGACGCAGGGCGGCGAGCGGCAGCGCATCACGATGGTCTGGCTGCGCCGCGACGCGGCG
GCCATCGATGCGAGACTGCTGGCCGCCTATCCGGACACCCGGCGCCTGGTCGCCGATCCGGCCGCGCTCGACGCGTGGCT
GCCGGCCGAGGCCGGCACGCAGGCGACGGATCACATCTATCTGGTGGACCCCAACGGCAACCTGATGATGCGCTTCCCGA
AGGACCCCGACCCCAGCCGGATCAAGCACGACGTGACCAAGCTGCTCAAGTGGTCGAGCATCGGCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCGCGCAAGCCTTCGGGCGCGACCTGAGCGCGCCACCGGCGGCGTTCGGCGCCGCGCCCCGCTCCCTATCC
AGACGATGAAGAGGAATTTC

Downstream 100 bases:

>100_bases
ACGGCCGGTACCCGCAATCGAGAACTCCCGGATGTACTTACTGCAACTGGGCCTGATCGGCCTCACCATCGCGCTGTTGC
CCCTCTCCTACGTGTGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSTQPSRPTPARPSPDHSPDRPSGQGGTGRDPHSERDTSSQRGSWRRGRWVVLALCLICAAPLIASYFTYYVIKPRGAST
NYGTLIEPQRPIPATLTATDENGRTVALASLRGVWLLMMENGSLCDDACARKLYFMRQVRATQGGERQRITMVWLRRDAA
AIDARLLAAYPDTRRLVADPAALDAWLPAEAGTQATDHIYLVDPNGNLMMRFPKDPDPSRIKHDVTKLLKWSSIG

Sequences:

>Translated_235_residues
MSTQPSRPTPARPSPDHSPDRPSGQGGTGRDPHSERDTSSQRGSWRRGRWVVLALCLICAAPLIASYFTYYVIKPRGAST
NYGTLIEPQRPIPATLTATDENGRTVALASLRGVWLLMMENGSLCDDACARKLYFMRQVRATQGGERQRITMVWLRRDAA
AIDARLLAAYPDTRRLVADPAALDAWLPAEAGTQATDHIYLVDPNGNLMMRFPKDPDPSRIKHDVTKLLKWSSIG
>Mature_234_residues
STQPSRPTPARPSPDHSPDRPSGQGGTGRDPHSERDTSSQRGSWRRGRWVVLALCLICAAPLIASYFTYYVIKPRGASTN
YGTLIEPQRPIPATLTATDENGRTVALASLRGVWLLMMENGSLCDDACARKLYFMRQVRATQGGERQRITMVWLRRDAAA
IDARLLAAYPDTRRLVADPAALDAWLPAEAGTQATDHIYLVDPNGNLMMRFPKDPDPSRIKHDVTKLLKWSSIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26027; Mature: 25896

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQPSRPTPARPSPDHSPDRPSGQGGTGRDPHSERDTSSQRGSWRRGRWVVLALCLICA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
APLIASYFTYYVIKPRGASTNYGTLIEPQRPIPATLTATDENGRTVALASLRGVWLLMME
HHHHHHHHEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
NGSLCDDACARKLYFMRQVRATQGGERQRITMVWLRRDAAAIDARLLAAYPDTRRLVADP
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHEEECCCCCCEEECC
AALDAWLPAEAGTQATDHIYLVDPNGNLMMRFPKDPDPSRIKHDVTKLLKWSSIG
HHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STQPSRPTPARPSPDHSPDRPSGQGGTGRDPHSERDTSSQRGSWRRGRWVVLALCLICA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
APLIASYFTYYVIKPRGASTNYGTLIEPQRPIPATLTATDENGRTVALASLRGVWLLMME
HHHHHHHHEEEEECCCCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCEEEEEEC
NGSLCDDACARKLYFMRQVRATQGGERQRITMVWLRRDAAAIDARLLAAYPDTRRLVADP
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHEEECCCCCCEEECC
AALDAWLPAEAGTQATDHIYLVDPNGNLMMRFPKDPDPSRIKHDVTKLLKWSSIG
HHHHCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA