Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is dnaJ [H]

Identifier: 238028689

GI number: 238028689

Start: 3585934

End: 3586842

Strand: Reverse

Name: dnaJ [H]

Synonym: bglu_1g31530

Alternate gene names: 238028689

Gene position: 3586842-3585934 (Counterclockwise)

Preceding gene: 238028690

Following gene: 238028688

Centisome position: 91.82

GC content: 67.99

Gene sequence:

>909_bases
ATGAAAATCCATAGTCATTATGACAATCTGAAGGTATCGCGCGATGCGCCTCCGGAGGTGATTCGCGCCGCCTATAAAAG
CCTTGCGCAGAAGTACCATCCCGATCGCAATCGCGACCCGCGGGCGGCGCGGATCTTCACGATCATCAATGCCGCCTACG
ACGTGCTCAGCGATCCATCCCGGCGCGCGGATCACGACGAATGGCTGGCGAAAAAGGAGCACGAGGCGGCGCACGCCGCG
CGCCAAGACGCGCCCGAGCCTGCCGCCGCCGCTCGCCCGCAGCCGGCGCGAACCGGCCCGGGCCGGCGCCTGCCGCTGCC
CGTCTGGCTGCTGATCGGCGTGATTGCCTGGCTGGGCGTCAGCCTGCTGGTGAAGCAGGTCCGTGTGCCGGGCCAGCTGG
ACGTCGCCGTGCCGCCGCCGATCGCGACACCCGCCGGGTCGTATACGCCGCCGTCGCCGGGCGCCATTCCGCTGACGAAG
GACGGCCCGCGCTACGTCCGCCCCTCGGTCGCACCCAACGGGCTCGCATGGCCGGATCGGGCTGCCTATCTGAGCGGCTA
TCCGGTGTCGGCGAACGACGGCCATTCGACCATCACGATCGACAACACCGGCAATCCGTTTGACGTCCACGGCAAGCTGA
TCCGCATCGACGATGAGGCGGGGCCGGCCGTGGTCCGCCAGTTCTTCATTCCGGCCGGCCGGTCGTTCCGGCTGCAGATG
CTCGCGCCCGGCCGCTACGATCTGCACTATCGGCAGCTGGACGACGGCAGCACCTTCAGGACGGAGCCCATCGGGCTGCA
GGAATACGCCACTGATGGCGACCTCCGCTATCAGAGCGCGAGCATCGCGCTGTTTCCGGCCTCGGACGGCACCATGGGCC
CGCAGCCGATCGCGGCCGATACGTTCTGA

Upstream 100 bases:

>100_bases
GGACGGCGGCAGAATCGGTTCGACGGCGCGTCCGATCGCTGCGGTAAGATGGGACCGCTACGGGTGGCGGGCCACGCGTG
CCGTCGTGTCGGGGAAAGGG

Downstream 100 bases:

>100_bases
GGCTTGCCGCCATCGCCGTGACCGCCGTCGGCCGGCGCCCGCGCCGCGCCCCGGCCTGCACCGCCTTTCGCGGGCCTACG
CCCGGCGCACCGCCGCCTGG

Product: Heat shock protein DnaJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA
RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK
DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM
LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF

Sequences:

>Translated_302_residues
MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA
RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK
DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM
LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF
>Mature_302_residues
MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA
RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK
DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM
LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI68077168, Length=66, Percent_Identity=51.5151515151515, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI68077166, Length=66, Percent_Identity=51.5151515151515, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 32937; Mature: 32937

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPS
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
RRADHDEWLAKKEHEAAHAARQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTKDGPRYVRPSVAPNGLAWPDR
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
AAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM
HHHHCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEECCCCHHHHHHHHCCCCCCEEEEE
LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAAD
ECCCCCCEEEEECCCCCCEECCCCCHHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCC
TF
CC
>Mature Secondary Structure
MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPS
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
RRADHDEWLAKKEHEAAHAARQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTKDGPRYVRPSVAPNGLAWPDR
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
AAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM
HHHHCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEECCCCHHHHHHHHCCCCCCEEEEE
LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAAD
ECCCCCCEEEEECCCCCCEECCCCCHHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCC
TF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA