| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dnaJ [H]
Identifier: 238028689
GI number: 238028689
Start: 3585934
End: 3586842
Strand: Reverse
Name: dnaJ [H]
Synonym: bglu_1g31530
Alternate gene names: 238028689
Gene position: 3586842-3585934 (Counterclockwise)
Preceding gene: 238028690
Following gene: 238028688
Centisome position: 91.82
GC content: 67.99
Gene sequence:
>909_bases ATGAAAATCCATAGTCATTATGACAATCTGAAGGTATCGCGCGATGCGCCTCCGGAGGTGATTCGCGCCGCCTATAAAAG CCTTGCGCAGAAGTACCATCCCGATCGCAATCGCGACCCGCGGGCGGCGCGGATCTTCACGATCATCAATGCCGCCTACG ACGTGCTCAGCGATCCATCCCGGCGCGCGGATCACGACGAATGGCTGGCGAAAAAGGAGCACGAGGCGGCGCACGCCGCG CGCCAAGACGCGCCCGAGCCTGCCGCCGCCGCTCGCCCGCAGCCGGCGCGAACCGGCCCGGGCCGGCGCCTGCCGCTGCC CGTCTGGCTGCTGATCGGCGTGATTGCCTGGCTGGGCGTCAGCCTGCTGGTGAAGCAGGTCCGTGTGCCGGGCCAGCTGG ACGTCGCCGTGCCGCCGCCGATCGCGACACCCGCCGGGTCGTATACGCCGCCGTCGCCGGGCGCCATTCCGCTGACGAAG GACGGCCCGCGCTACGTCCGCCCCTCGGTCGCACCCAACGGGCTCGCATGGCCGGATCGGGCTGCCTATCTGAGCGGCTA TCCGGTGTCGGCGAACGACGGCCATTCGACCATCACGATCGACAACACCGGCAATCCGTTTGACGTCCACGGCAAGCTGA TCCGCATCGACGATGAGGCGGGGCCGGCCGTGGTCCGCCAGTTCTTCATTCCGGCCGGCCGGTCGTTCCGGCTGCAGATG CTCGCGCCCGGCCGCTACGATCTGCACTATCGGCAGCTGGACGACGGCAGCACCTTCAGGACGGAGCCCATCGGGCTGCA GGAATACGCCACTGATGGCGACCTCCGCTATCAGAGCGCGAGCATCGCGCTGTTTCCGGCCTCGGACGGCACCATGGGCC CGCAGCCGATCGCGGCCGATACGTTCTGA
Upstream 100 bases:
>100_bases GGACGGCGGCAGAATCGGTTCGACGGCGCGTCCGATCGCTGCGGTAAGATGGGACCGCTACGGGTGGCGGGCCACGCGTG CCGTCGTGTCGGGGAAAGGG
Downstream 100 bases:
>100_bases GGCTTGCCGCCATCGCCGTGACCGCCGTCGGCCGGCGCCCGCGCCGCGCCCCGGCCTGCACCGCCTTTCGCGGGCCTACG CCCGGCGCACCGCCGCCTGG
Product: Heat shock protein DnaJ-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF
Sequences:
>Translated_302_residues MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF >Mature_302_residues MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPSRRADHDEWLAKKEHEAAHAA RQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGVSLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTK DGPRYVRPSVAPNGLAWPDRAAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAADTF
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI68077168, Length=66, Percent_Identity=51.5151515151515, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI68077166, Length=66, Percent_Identity=51.5151515151515, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 32937; Mature: 32937
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPS CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC RRADHDEWLAKKEHEAAHAARQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTKDGPRYVRPSVAPNGLAWPDR HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC AAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM HHHHCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEECCCCHHHHHHHHCCCCCCEEEEE LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAAD ECCCCCCEEEEECCCCCCEECCCCCHHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCC TF CC >Mature Secondary Structure MKIHSHYDNLKVSRDAPPEVIRAAYKSLAQKYHPDRNRDPRAARIFTIINAAYDVLSDPS CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC RRADHDEWLAKKEHEAAHAARQDAPEPAAAARPQPARTGPGRRLPLPVWLLIGVIAWLGV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SLLVKQVRVPGQLDVAVPPPIATPAGSYTPPSPGAIPLTKDGPRYVRPSVAPNGLAWPDR HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC AAYLSGYPVSANDGHSTITIDNTGNPFDVHGKLIRIDDEAGPAVVRQFFIPAGRSFRLQM HHHHCCCCCCCCCCCCEEEECCCCCCEEECCEEEEEECCCCHHHHHHHHCCCCCCEEEEE LAPGRYDLHYRQLDDGSTFRTEPIGLQEYATDGDLRYQSASIALFPASDGTMGPQPIAAD ECCCCCCEEEEECCCCCCEECCCCCHHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCCC TF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA