Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028642

Identifier: 238028642

GI number: 238028642

Start: 3532900

End: 3533547

Strand: Reverse

Name: 238028642

Synonym: bglu_1g31060

Alternate gene names: NA

Gene position: 3533547-3532900 (Counterclockwise)

Preceding gene: 238028643

Following gene: 238028641

Centisome position: 90.45

GC content: 60.49

Gene sequence:

>648_bases
TTGCTCATGATGCAAATTCCCTATCTCGAACCGGCCGGAAGCAAGGCCGACATCGACAAGGCCGACGGCCTGGTGGCCGA
GATGAAAGCGCTGATTGCCGTCTTGACGCAGGCCGGACTGACGCCCGACAACGAGTACGTGCTGCTCGACAACGTGGCCT
TTTTCACCGAGCAGGTCCGGGTTCCGCAAGACGGCGGTTTCGTGGAGCGCGATCAGTTCATGGTCGGCTTCACGTCCGAC
GCGTTCGACTCGAATCTCTACGCGAGCGACGCGATCAAGGCGGCGCTGATCAAATCGCACAGCGGCCGTTGCGCCTATTG
CGAAACGCTGATCAACCAGACCGCCTATGGCGACGTCGAACACTTCCGGCCCAAGGCGGCCTACGAAACCTCGTGGTCTC
CGGCCTTGTTCCGGCCGGGCTACTACAGCCTGGCCTACGAGCCGCGCACCATGCTGCGCTTCAACCCGATCAACGGCCAT
GCCTATCCGTTTGACCTGGTCGCGTCTCTTTACGCGCAGATAGAGGGCTGGGGGATGCCGCAGACGTCGGCGGAAATCTG
GAAAGATCCGACCAAGATTCCCGATCAACACGATTTGAACGGCGTGTCCATTTCCGCCGCGCGTTATACGACGCTGACAA
CAAGCTGA

Upstream 100 bases:

>100_bases
AACGCGTGATCTGCATCGATTCGTTCGAGCCCGATCGGCCGGCCGTTCATAAGATGCGGGGAAAGATCCATGCGACGTCG
CGGGATGATCCGGGAGAGCC

Downstream 100 bases:

>100_bases
CCCGGCCCACCATCACCGACAACACCAACCTCAGATACAGGTTCACCGCTGCGGTGAACCTGATACGGCGGAATGCCGAG
GCCTACAACACGTGGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD
AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH
AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS

Sequences:

>Translated_215_residues
MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD
AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH
AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS
>Mature_215_residues
MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD
AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH
AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23841; Mature: 23841

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVR
CEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHC
VPQDGGFVERDQFMVGFTSDAFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVE
CCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
HFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGHAYPFDLVASLYAQIEGWGMP
HCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
QTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS
CCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEECC
>Mature Secondary Structure
MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVR
CEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHC
VPQDGGFVERDQFMVGFTSDAFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVE
CCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
HFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGHAYPFDLVASLYAQIEGWGMP
HCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
QTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS
CCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA