| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028642
Identifier: 238028642
GI number: 238028642
Start: 3532900
End: 3533547
Strand: Reverse
Name: 238028642
Synonym: bglu_1g31060
Alternate gene names: NA
Gene position: 3533547-3532900 (Counterclockwise)
Preceding gene: 238028643
Following gene: 238028641
Centisome position: 90.45
GC content: 60.49
Gene sequence:
>648_bases TTGCTCATGATGCAAATTCCCTATCTCGAACCGGCCGGAAGCAAGGCCGACATCGACAAGGCCGACGGCCTGGTGGCCGA GATGAAAGCGCTGATTGCCGTCTTGACGCAGGCCGGACTGACGCCCGACAACGAGTACGTGCTGCTCGACAACGTGGCCT TTTTCACCGAGCAGGTCCGGGTTCCGCAAGACGGCGGTTTCGTGGAGCGCGATCAGTTCATGGTCGGCTTCACGTCCGAC GCGTTCGACTCGAATCTCTACGCGAGCGACGCGATCAAGGCGGCGCTGATCAAATCGCACAGCGGCCGTTGCGCCTATTG CGAAACGCTGATCAACCAGACCGCCTATGGCGACGTCGAACACTTCCGGCCCAAGGCGGCCTACGAAACCTCGTGGTCTC CGGCCTTGTTCCGGCCGGGCTACTACAGCCTGGCCTACGAGCCGCGCACCATGCTGCGCTTCAACCCGATCAACGGCCAT GCCTATCCGTTTGACCTGGTCGCGTCTCTTTACGCGCAGATAGAGGGCTGGGGGATGCCGCAGACGTCGGCGGAAATCTG GAAAGATCCGACCAAGATTCCCGATCAACACGATTTGAACGGCGTGTCCATTTCCGCCGCGCGTTATACGACGCTGACAA CAAGCTGA
Upstream 100 bases:
>100_bases AACGCGTGATCTGCATCGATTCGTTCGAGCCCGATCGGCCGGCCGTTCATAAGATGCGGGGAAAGATCCATGCGACGTCG CGGGATGATCCGGGAGAGCC
Downstream 100 bases:
>100_bases CCCGGCCCACCATCACCGACAACACCAACCTCAGATACAGGTTCACCGCTGCGGTGAACCTGATACGGCGGAATGCCGAG GCCTACAACACGTGGCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS
Sequences:
>Translated_215_residues MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS >Mature_215_residues MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVRVPQDGGFVERDQFMVGFTSD AFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVEHFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGH AYPFDLVASLYAQIEGWGMPQTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23841; Mature: 23841
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVR CEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHC VPQDGGFVERDQFMVGFTSDAFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVE CCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH HFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGHAYPFDLVASLYAQIEGWGMP HCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC QTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS CCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEECC >Mature Secondary Structure MLMMQIPYLEPAGSKADIDKADGLVAEMKALIAVLTQAGLTPDNEYVLLDNVAFFTEQVR CEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHC VPQDGGFVERDQFMVGFTSDAFDSNLYASDAIKAALIKSHSGRCAYCETLINQTAYGDVE CCCCCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH HFRPKAAYETSWSPALFRPGYYSLAYEPRTMLRFNPINGHAYPFDLVASLYAQIEGWGMP HCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC QTSAEIWKDPTKIPDQHDLNGVSISAARYTTLTTS CCCHHHHCCCCCCCCCCCCCCEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA