| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028635
Identifier: 238028635
GI number: 238028635
Start: 3523172
End: 3524194
Strand: Direct
Name: 238028635
Synonym: bglu_1g30990
Alternate gene names: NA
Gene position: 3523172-3524194 (Clockwise)
Preceding gene: 238028632
Following gene: 238028636
Centisome position: 90.19
GC content: 71.36
Gene sequence:
>1023_bases GTGCCGGTTCGCATGCCACGCCCGCGTTTCCTGGTATCGCGCCTGCCGCGCGCGGCGGTGCTCGCCGCCCTGCTTGGCGC GGCCTCGCCGTGGACCGTGCCGGCCGCCGACGCGCAGGCGTTCACGCTGTTCGCCGGCCCGCTGTCCGGCGCCGGCACGC ACTCGGCCGGCTGGGCCTTCGACTATCGGGAAGGGCTCGGCAAGTACGCCGCCGCCGGCTTCACCTGGTACAACGAAGGC CATCTGCCGAGCCACCACCGCGACGGCCAGTCGGTGCAGCTCTGGGGACGCCTGCCGCTCGGCCGGCGCCGCTTCGTGCT GTCGGCCGGCGTCGGCCCCTATCGCTATTTCGACACCGAGGCGGCCGGCCAGGGGCGCGGCTACTCGAACACGCACGGCT GGGGCGTGCTGATGAGCGTGCGCGCGGCCTACTACGGCTCGCGCCGCTGGCTGCTGCAAGTGCAGGCGAACCGCGTCCAC ACCTTCAGCGGCCCCGACACCACCTCAATGATGTTCGGCATCGGCTACCAGCTCGCCGCACCGGACAGGCCCGGCCCGTG CGACTATGCGACCGGCCGCCTCGATCGCGTGACGAACCAGGAAGTGACCGGGATGATCGGCGAGACGATCCTGAACAGCC GCTCCTCGCCAAGCTCGCTCGGCGCCAGCGTCGAGTACCGGCGCGGCATCGCGAAGCACCTGGACTGGACCGCCACCTAT CTGTACGAGGGCTCGAAGCGCCAGATCCGCCGCAACGGCGTGGCCACCGAGCTGTGGCTCACGCGCGCGTTCCTCGACGA CAGGATCGCGCTGGCGGCCGGCGCCGGCCTATACGTGGCAGTCGACCAGCGCCACATGCGCGGCAGCAACACCGGCGACG GCCGGCTGTCCTGCATCGTCTCGATCTCGGCCAGCTACCGGCTCGGCCGCAGCTGGCTCACACGCCTCACCTGGAAGCGC GTGGTCACCCGCTACGATCGCGACACCGACGTGATCCAGGCCGGTCTCGGCTACCGCTTCTGA
Upstream 100 bases:
>100_bases CACCGTCACGCACCGCCGTTACGGAACCGAACCGGCCTGCGCCAGATTCCTTACATTCGCGCGACAATGGCCGCCGACCG ACAGCCAAGGGATCACGCCA
Downstream 100 bases:
>100_bases CGGTACGGGCCGGCCCGCCGCAACGCGGCGCCAGGCCCGAGCGGCGCCGGCCCTTCGCGATCCGTGCGACTTGCGTGGAA TCCGGCGCAGCACCGGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPVRMPRPRFLVSRLPRAAVLAALLGAASPWTVPAADAQAFTLFAGPLSGAGTHSAGWAFDYREGLGKYAAAGFTWYNEG HLPSHHRDGQSVQLWGRLPLGRRRFVLSAGVGPYRYFDTEAAGQGRGYSNTHGWGVLMSVRAAYYGSRRWLLQVQANRVH TFSGPDTTSMMFGIGYQLAAPDRPGPCDYATGRLDRVTNQEVTGMIGETILNSRSSPSSLGASVEYRRGIAKHLDWTATY LYEGSKRQIRRNGVATELWLTRAFLDDRIALAAGAGLYVAVDQRHMRGSNTGDGRLSCIVSISASYRLGRSWLTRLTWKR VVTRYDRDTDVIQAGLGYRF
Sequences:
>Translated_340_residues MPVRMPRPRFLVSRLPRAAVLAALLGAASPWTVPAADAQAFTLFAGPLSGAGTHSAGWAFDYREGLGKYAAAGFTWYNEG HLPSHHRDGQSVQLWGRLPLGRRRFVLSAGVGPYRYFDTEAAGQGRGYSNTHGWGVLMSVRAAYYGSRRWLLQVQANRVH TFSGPDTTSMMFGIGYQLAAPDRPGPCDYATGRLDRVTNQEVTGMIGETILNSRSSPSSLGASVEYRRGIAKHLDWTATY LYEGSKRQIRRNGVATELWLTRAFLDDRIALAAGAGLYVAVDQRHMRGSNTGDGRLSCIVSISASYRLGRSWLTRLTWKR VVTRYDRDTDVIQAGLGYRF >Mature_339_residues PVRMPRPRFLVSRLPRAAVLAALLGAASPWTVPAADAQAFTLFAGPLSGAGTHSAGWAFDYREGLGKYAAAGFTWYNEGH LPSHHRDGQSVQLWGRLPLGRRRFVLSAGVGPYRYFDTEAAGQGRGYSNTHGWGVLMSVRAAYYGSRRWLLQVQANRVHT FSGPDTTSMMFGIGYQLAAPDRPGPCDYATGRLDRVTNQEVTGMIGETILNSRSSPSSLGASVEYRRGIAKHLDWTATYL YEGSKRQIRRNGVATELWLTRAFLDDRIALAAGAGLYVAVDQRHMRGSNTGDGRLSCIVSISASYRLGRSWLTRLTWKRV VTRYDRDTDVIQAGLGYRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37531; Mature: 37400
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRMPRPRFLVSRLPRAAVLAALLGAASPWTVPAADAQAFTLFAGPLSGAGTHSAGWAF CCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEE DYREGLGKYAAAGFTWYNEGHLPSHHRDGQSVQLWGRLPLGRRRFVLSAGVGPYRYFDTE HHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEECCC AAGQGRGYSNTHGWGVLMSVRAAYYGSRRWLLQVQANRVHTFSGPDTTSMMFGIGYQLAA CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCHHHHHEECCEEEEC PDRPGPCDYATGRLDRVTNQEVTGMIGETILNSRSSPSSLGASVEYRRGIAKHLDWTATY CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCEEEE LYEGSKRQIRRNGVATELWLTRAFLDDRIALAAGAGLYVAVDQRHMRGSNTGDGRLSCIV EECCCHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCEEEEEECHHCCCCCCCCCEEEEEE SISASYRLGRSWLTRLTWKRVVTRYDRDTDVIQAGLGYRF EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC >Mature Secondary Structure PVRMPRPRFLVSRLPRAAVLAALLGAASPWTVPAADAQAFTLFAGPLSGAGTHSAGWAF CCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEE DYREGLGKYAAAGFTWYNEGHLPSHHRDGQSVQLWGRLPLGRRRFVLSAGVGPYRYFDTE HHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEECCC AAGQGRGYSNTHGWGVLMSVRAAYYGSRRWLLQVQANRVHTFSGPDTTSMMFGIGYQLAA CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCCHHHHHEECCEEEEC PDRPGPCDYATGRLDRVTNQEVTGMIGETILNSRSSPSSLGASVEYRRGIAKHLDWTATY CCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCEEEE LYEGSKRQIRRNGVATELWLTRAFLDDRIALAAGAGLYVAVDQRHMRGSNTGDGRLSCIV EECCCHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCEEEEEECHHCCCCCCCCCEEEEEE SISASYRLGRSWLTRLTWKRVVTRYDRDTDVIQAGLGYRF EECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA