| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028632
Identifier: 238028632
GI number: 238028632
Start: 3520392
End: 3521294
Strand: Direct
Name: 238028632
Synonym: bglu_1g30960
Alternate gene names: NA
Gene position: 3520392-3521294 (Clockwise)
Preceding gene: 238028629
Following gene: 238028635
Centisome position: 90.12
GC content: 70.65
Gene sequence:
>903_bases ATGGAACCGAATTTCGACGCCACCGGCATCCCCTTGTCCGAGCCGTCGCCCGCCGCGGCCCTGGCGCCCGCCGATCTCGA CACGCTGCGGCGCGCCCGGACCACGCTCGAGAGCCCGTCGCTGACGATGAAGCTGACCAGCGTGGTGGGCGCGCCGGTCG AGAAGATGATCACGAAACTGCCCGGCTTCGCCACCGACAAGATCAACGACGCCACCGAAACCGCGCTGCGCAAATGCCTG CAGCTGGCGCTGCGCACGCTCGGCAAGCCGGGCGCCGCGATGGACGCGGAGCATGCGCCCGACAAGCCGAGCAACTTCCT GCACAAGCTCGCGGTGGCCACAACCGGCGCGGCGGGCGGCGCGTTCGGCCTGTTCGCGCTGCCGGTCGAGCTGCCGGTCA CGACCACGCTGATGTTTCGCTCGATCTGCGATATCGCGCGCAGCGAGGGAGAGGACCTGACCACGGTCGACACGCAGTTG CAGTGCCTCGCCGTGCTCGGCATGGGCGGCGGCTTCGCCAGCCCGGGCACGACCGGCGGCGGCCAGGATCCAGGGCAGGC CGAGCGCGATGCCGACTTCGGCTATTTCGTGCTGCGCGGCGCGCTCGCGCAGGCGGTGTCGAAGGCCTCGTCCGAGATGG CGTCGAAGGGCTTCGCCACGCACGGCTCGGCCGCGCTGCTGCGCTTCGTGCAGGCGATCGCGTCGCGCTTCTCGGCGCAG GTCACCGAGCAGATCGCCGCGAAGTCGATCCCGGCGCTCGGCGCGGTGCTCGGTGCGACCGTCAACACGCTGTTCATCGA CCACTTCCAGCAGGCCGCGCACGCCCACTTCGCGATCCGGCGGCTCGAACGCCGCTATGGCCAGGCGGCAGTCGAGGCCG CCTACCGCACGCTCTCGATCTAG
Upstream 100 bases:
>100_bases CTTGCACAATGTTTGACATGTCAACGATTCGAAATGATAGCATGCGCAGAATGCCGCAAGCTTGGTGAAGCGCTGGCTTC ACTCATCTCACGGGAGGGAT
Downstream 100 bases:
>100_bases GCCGCCACCGGCGCCGGCTGCGCCGCGCGCTCGACCAGACGACGTCCGAACGCGGCGGCCTGATCGAGCGCGCGGCTCGC CTCGGGCATGAACGGCACGG
Product: putative protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI
Sequences:
>Translated_300_residues MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI >Mature_300_residues MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31299; Mature: 31299
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC PGFATDKINDATETALRKCLQLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC AFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQLQCLAVLGMGGGFASPGTTGG CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC PGFATDKINDATETALRKCLQLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC AFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQLQCLAVLGMGGGFASPGTTGG CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA