Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028632

Identifier: 238028632

GI number: 238028632

Start: 3520392

End: 3521294

Strand: Direct

Name: 238028632

Synonym: bglu_1g30960

Alternate gene names: NA

Gene position: 3520392-3521294 (Clockwise)

Preceding gene: 238028629

Following gene: 238028635

Centisome position: 90.12

GC content: 70.65

Gene sequence:

>903_bases
ATGGAACCGAATTTCGACGCCACCGGCATCCCCTTGTCCGAGCCGTCGCCCGCCGCGGCCCTGGCGCCCGCCGATCTCGA
CACGCTGCGGCGCGCCCGGACCACGCTCGAGAGCCCGTCGCTGACGATGAAGCTGACCAGCGTGGTGGGCGCGCCGGTCG
AGAAGATGATCACGAAACTGCCCGGCTTCGCCACCGACAAGATCAACGACGCCACCGAAACCGCGCTGCGCAAATGCCTG
CAGCTGGCGCTGCGCACGCTCGGCAAGCCGGGCGCCGCGATGGACGCGGAGCATGCGCCCGACAAGCCGAGCAACTTCCT
GCACAAGCTCGCGGTGGCCACAACCGGCGCGGCGGGCGGCGCGTTCGGCCTGTTCGCGCTGCCGGTCGAGCTGCCGGTCA
CGACCACGCTGATGTTTCGCTCGATCTGCGATATCGCGCGCAGCGAGGGAGAGGACCTGACCACGGTCGACACGCAGTTG
CAGTGCCTCGCCGTGCTCGGCATGGGCGGCGGCTTCGCCAGCCCGGGCACGACCGGCGGCGGCCAGGATCCAGGGCAGGC
CGAGCGCGATGCCGACTTCGGCTATTTCGTGCTGCGCGGCGCGCTCGCGCAGGCGGTGTCGAAGGCCTCGTCCGAGATGG
CGTCGAAGGGCTTCGCCACGCACGGCTCGGCCGCGCTGCTGCGCTTCGTGCAGGCGATCGCGTCGCGCTTCTCGGCGCAG
GTCACCGAGCAGATCGCCGCGAAGTCGATCCCGGCGCTCGGCGCGGTGCTCGGTGCGACCGTCAACACGCTGTTCATCGA
CCACTTCCAGCAGGCCGCGCACGCCCACTTCGCGATCCGGCGGCTCGAACGCCGCTATGGCCAGGCGGCAGTCGAGGCCG
CCTACCGCACGCTCTCGATCTAG

Upstream 100 bases:

>100_bases
CTTGCACAATGTTTGACATGTCAACGATTCGAAATGATAGCATGCGCAGAATGCCGCAAGCTTGGTGAAGCGCTGGCTTC
ACTCATCTCACGGGAGGGAT

Downstream 100 bases:

>100_bases
GCCGCCACCGGCGCCGGCTGCGCCGCGCGCTCGACCAGACGACGTCCGAACGCGGCGGCCTGATCGAGCGCGCGGCTCGC
CTCGGGCATGAACGGCACGG

Product: putative protease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL
QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL
QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ
VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI

Sequences:

>Translated_300_residues
MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL
QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL
QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ
VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI
>Mature_300_residues
MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKLPGFATDKINDATETALRKCL
QLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQL
QCLAVLGMGGGFASPGTTGGGQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ
VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31299; Mature: 31299

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC
PGFATDKINDATETALRKCLQLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
AFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQLQCLAVLGMGGGFASPGTTGG
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEPNFDATGIPLSEPSPAAALAPADLDTLRRARTTLESPSLTMKLTSVVGAPVEKMITKL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHC
PGFATDKINDATETALRKCLQLALRTLGKPGAAMDAEHAPDKPSNFLHKLAVATTGAAGG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
AFGLFALPVELPVTTTLMFRSICDIARSEGEDLTTVDTQLQCLAVLGMGGGFASPGTTGG
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GQDPGQAERDADFGYFVLRGALAQAVSKASSEMASKGFATHGSAALLRFVQAIASRFSAQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
VTEQIAAKSIPALGAVLGATVNTLFIDHFQQAAHAHFAIRRLERRYGQAAVEAAYRTLSI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA