| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028634
Identifier: 238028634
GI number: 238028634
Start: 3522321
End: 3522755
Strand: Reverse
Name: 238028634
Synonym: bglu_1g30980
Alternate gene names: NA
Gene position: 3522755-3522321 (Counterclockwise)
Preceding gene: 238028637
Following gene: 238028633
Centisome position: 90.18
GC content: 70.11
Gene sequence:
>435_bases ATGGGAATCCTGCGTATCGTGAAGACGGGTCTGCTGGCCGGCGTGCTGGTCAGCGCGGCGGCGCATGCCGAGACGGCGAG GCTGGTGGCGAACCTGCAGCCGTCGAGCGAGGTGCCGCCAACGGCGACCCGCGGCTCCGGCATGTTGACCGCGACGTTCG ACACGGCCACCCACACGCTGGCCTGGACCGTCACCTACGGCGGCCTGAGCGGCCCGGCAACCGCCGCGCACTTCCACGGC CCGGCGCCGGTGGGGCAGAACGCGGCGGTCCAGGTGCCGATCGCGAAGGATGCGCTCGCGAGCCCGATCAAGGGATCGGC GACACTCGACGATCAGCAGGTGACCGAGCTGATGGCGGGCAAGTGGTACTTCAACATCCACACCAGGGCGCATCCGTCCG GCGAGATCCGCGGCCAGGTCGAACCGGCCAACTGA
Upstream 100 bases:
>100_bases CGCCTCGGCGCGCGCGATCCGCCCCGATCGTCTACCATCGCATCAGCCGGCGAGCGCGGTGCGCCGCCGGCGGGTGATCC AACCGTACAAGGAGATGCCG
Downstream 100 bases:
>100_bases GGCGCCGCGGCCGCCTTCCAGGCCGGGCGGGCGTCTCACGCGTCCGGCACATGAACCATTCGTCCCGCGCTCCGCAGGAG GATCGATGAGTTGGCAATCC
Product: CHRD domain-containing protein
Products: NA
Alternate protein names: CHRD Domain Containing Protein; Beta-Ig-H3/Fasciclin; Signal Peptide; CHRD Domain-Containing Superfamily; Chordin
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGILRIVKTGLLAGVLVSAAAHAETARLVANLQPSSEVPPTATRGSGMLTATFDTATHTLAWTVTYGGLSGPATAAHFHG PAPVGQNAAVQVPIAKDALASPIKGSATLDDQQVTELMAGKWYFNIHTRAHPSGEIRGQVEPAN
Sequences:
>Translated_144_residues MGILRIVKTGLLAGVLVSAAAHAETARLVANLQPSSEVPPTATRGSGMLTATFDTATHTLAWTVTYGGLSGPATAAHFHG PAPVGQNAAVQVPIAKDALASPIKGSATLDDQQVTELMAGKWYFNIHTRAHPSGEIRGQVEPAN >Mature_143_residues GILRIVKTGLLAGVLVSAAAHAETARLVANLQPSSEVPPTATRGSGMLTATFDTATHTLAWTVTYGGLSGPATAAHFHGP APVGQNAAVQVPIAKDALASPIKGSATLDDQQVTELMAGKWYFNIHTRAHPSGEIRGQVEPAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14816; Mature: 14685
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS50933 CHRD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILRIVKTGLLAGVLVSAAAHAETARLVANLQPSSEVPPTATRGSGMLTATFDTATHTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCEEE AWTVTYGGLSGPATAAHFHGPAPVGQNAAVQVPIAKDALASPIKGSATLDDQQVTELMAG EEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHCC KWYFNIHTRAHPSGEIRGQVEPAN CEEEEEEECCCCCCCEEEEEECCC >Mature Secondary Structure GILRIVKTGLLAGVLVSAAAHAETARLVANLQPSSEVPPTATRGSGMLTATFDTATHTL CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEECCCCEEE AWTVTYGGLSGPATAAHFHGPAPVGQNAAVQVPIAKDALASPIKGSATLDDQQVTELMAG EEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHCC KWYFNIHTRAHPSGEIRGQVEPAN CEEEEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA