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The map label for this gene is 238028628

Identifier: 238028628

GI number: 238028628

Start: 3516047

End: 3517327

Strand: Direct

Name: 238028628

Synonym: bglu_1g30920

Alternate gene names: NA

Gene position: 3516047-3517327 (Clockwise)

Preceding gene: 238028624

Following gene: 238028629

Centisome position: 90.0

GC content: 69.56

Gene sequence:

>1281_bases
ATGAAAGTTACAAACTATCAGGAAGCGGCGATCCAGCCCCTCGGCAAGGGACTCGGCCGCGTGCCGAGCGCGAGCGTGCC
GCTGTCGGACGCCGCGCGGTTGGAATGGAACCTGCTGGACGAGGATGTCAGCCTGCCCGCCGCGGTGCTGTACGCGGACC
GTGTCGAGCACAACCTGAAGTGGATGCAGGCGTTCGTCGCCGAATACGGCGTGAAGCTGGCGCCGCACGGCAAGACCACC
ATGGCGCCGCAGTTGTTCCGCCGCCAGATCGAGACGGGCGCCTGGGGCATCACGCTCGCCACCGCCCATCAGACGCGCGC
CGCCTATCAGGGCGGCGTGCGCCGCGTGCTGCTGGCCAACCAGCTGGTCGGCAAGCACAACATGGCGATCGTGGCCGAGC
TGCTGTCGGACCCGGAGTTCGAGTTCTTCTGCCTTGTCGATTCGGCCGACAACGTCGATCAGCTCGGCCGCTATTTCGCG
GCCGTCCACCGCCCGCTGCAGGTGCTGCTCGAACTCGGCGTGCCGGGCGGGCGCACCGGCGTGCGCGACGCACGGCAGCG
CGCCGCCGTGCTGGAGGCGATCGCGCGCCACGCCGGCACGATCCGGCTTGCCGGCATCGAGGTCTACGAAGGGGTGCTGA
AGGAAGAAGCCGGCGTGCGCGCGCTCCTGAAGGAAGCGGTGGCGCTTGCGCGCGAATTCGCGGCCGAAGGCCGTTTCGCG
CGCACGCCGGCGGTGCTCTCGGGCGCCGGCTCGGCCTGGTACGACGTGGTCGCCGACGAGTTCGCGCAGGCCGCCGCCGA
CGGCACCGTCGAGGTGGTGCTGCGCCCGGGCTGCTACCTGACGCACGATGTCGGCGTCTATCGCCGCGCGCAGGACGAGA
TCCTCGCGCGCAATCCGGTGGCCCGGCGCATGGGCGAGGCGCTCAAGCCCGCGTTGCAGCTGTGGGCCTACGTGCAGTCG
ATTCCCGAGCCGGACCGCGCGATCATCACGCTCGGCAAGCGCGACGCCGCGTTCGACGCCGGCTATCCGGAGCCGGCACG
CCACTTCCGCCCCGGCAGCGGCACCACGCCGCGCGATGTCACGCCGGCCGACGGCTGGGAAGTGACGGGCATGATGGACC
AGCACGCCTACCTGAAGATCGCCGTCGGGGCCGACGTGAAGGTCGGCGACATGATCGCGTTCGACATCTCGCATCCGTGC
CTGACGTTCGACAAGTGGCGGCAGATCCTCGTCGTCGATGCCGACTACCGCGTCACCGAAGTGATCGAGACGTTCTTCTG
A

Upstream 100 bases:

>100_bases
GGCGCCTGTTAGGAAATAACATAACCGGGCGGATGCTACTTTCTGTACTATCCTTGCGTCAACTTCGATTCAAATAAGAC
AAGCGATGGAGTATTCGAAG

Downstream 100 bases:

>100_bases
CACCTTGCGGGCGGGCGGCGCCGGCCGCCCGCCAAGTTGGCCGCCGGGCCGGCCCGGCGCCTCGCGCGGCGGGCCGTTGC
CGGCCACGCCCGACCGTCAT

Product: D-serine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKVTNYQEAAIQPLGKGLGRVPSASVPLSDAARLEWNLLDEDVSLPAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTT
MAPQLFRRQIETGAWGITLATAHQTRAAYQGGVRRVLLANQLVGKHNMAIVAELLSDPEFEFFCLVDSADNVDQLGRYFA
AVHRPLQVLLELGVPGGRTGVRDARQRAAVLEAIARHAGTIRLAGIEVYEGVLKEEAGVRALLKEAVALAREFAAEGRFA
RTPAVLSGAGSAWYDVVADEFAQAAADGTVEVVLRPGCYLTHDVGVYRRAQDEILARNPVARRMGEALKPALQLWAYVQS
IPEPDRAIITLGKRDAAFDAGYPEPARHFRPGSGTTPRDVTPADGWEVTGMMDQHAYLKIAVGADVKVGDMIAFDISHPC
LTFDKWRQILVVDADYRVTEVIETFF

Sequences:

>Translated_426_residues
MKVTNYQEAAIQPLGKGLGRVPSASVPLSDAARLEWNLLDEDVSLPAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTT
MAPQLFRRQIETGAWGITLATAHQTRAAYQGGVRRVLLANQLVGKHNMAIVAELLSDPEFEFFCLVDSADNVDQLGRYFA
AVHRPLQVLLELGVPGGRTGVRDARQRAAVLEAIARHAGTIRLAGIEVYEGVLKEEAGVRALLKEAVALAREFAAEGRFA
RTPAVLSGAGSAWYDVVADEFAQAAADGTVEVVLRPGCYLTHDVGVYRRAQDEILARNPVARRMGEALKPALQLWAYVQS
IPEPDRAIITLGKRDAAFDAGYPEPARHFRPGSGTTPRDVTPADGWEVTGMMDQHAYLKIAVGADVKVGDMIAFDISHPC
LTFDKWRQILVVDADYRVTEVIETFF
>Mature_426_residues
MKVTNYQEAAIQPLGKGLGRVPSASVPLSDAARLEWNLLDEDVSLPAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTT
MAPQLFRRQIETGAWGITLATAHQTRAAYQGGVRRVLLANQLVGKHNMAIVAELLSDPEFEFFCLVDSADNVDQLGRYFA
AVHRPLQVLLELGVPGGRTGVRDARQRAAVLEAIARHAGTIRLAGIEVYEGVLKEEAGVRALLKEAVALAREFAAEGRFA
RTPAVLSGAGSAWYDVVADEFAQAAADGTVEVVLRPGCYLTHDVGVYRRAQDEILARNPVARRMGEALKPALQLWAYVQS
IPEPDRAIITLGKRDAAFDAGYPEPARHFRPGSGTTPRDVTPADGWEVTGMMDQHAYLKIAVGADVKVGDMIAFDISHPC
LTFDKWRQILVVDADYRVTEVIETFF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 46595; Mature: 46595

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTNYQEAAIQPLGKGLGRVPSASVPLSDAARLEWNLLDEDVSLPAAVLYADRVEHNLK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHH
WMQAFVAEYGVKLAPHGKTTMAPQLFRRQIETGAWGITLATAHQTRAAYQGGVRRVLLAN
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHH
QLVGKHNMAIVAELLSDPEFEFFCLVDSADNVDQLGRYFAAVHRPLQVLLELGVPGGRTG
HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VRDARQRAAVLEAIARHAGTIRLAGIEVYEGVLKEEAGVRALLKEAVALAREFAAEGRFA
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RTPAVLSGAGSAWYDVVADEFAQAAADGTVEVVLRPGCYLTHDVGVYRRAQDEILARNPV
CCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHCCHH
ARRMGEALKPALQLWAYVQSIPEPDRAIITLGKRDAAFDAGYPEPARHFRPGSGTTPRDV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC
TPADGWEVTGMMDQHAYLKIAVGADVKVGDMIAFDISHPCLTFDKWRQILVVDADYRVTE
CCCCCCEEEEEECCCEEEEEEECCCCEECCEEEEECCCCCEEHHHCCEEEEEECCCHHHH
VIETFF
HHHHHC
>Mature Secondary Structure
MKVTNYQEAAIQPLGKGLGRVPSASVPLSDAARLEWNLLDEDVSLPAAVLYADRVEHNLK
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHH
WMQAFVAEYGVKLAPHGKTTMAPQLFRRQIETGAWGITLATAHQTRAAYQGGVRRVLLAN
HHHHHHHHHCCEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHH
QLVGKHNMAIVAELLSDPEFEFFCLVDSADNVDQLGRYFAAVHRPLQVLLELGVPGGRTG
HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VRDARQRAAVLEAIARHAGTIRLAGIEVYEGVLKEEAGVRALLKEAVALAREFAAEGRFA
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RTPAVLSGAGSAWYDVVADEFAQAAADGTVEVVLRPGCYLTHDVGVYRRAQDEILARNPV
CCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHHHCCHH
ARRMGEALKPALQLWAYVQSIPEPDRAIITLGKRDAAFDAGYPEPARHFRPGSGTTPRDV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC
TPADGWEVTGMMDQHAYLKIAVGADVKVGDMIAFDISHPCLTFDKWRQILVVDADYRVTE
CCCCCCEEEEEECCCEEEEEEECCCCEECCEEEEECCCCCEEHHHCCEEEEEECCCHHHH
VIETFF
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]