| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ybeZ [H]
Identifier: 238028583
GI number: 238028583
Start: 3462012
End: 3463070
Strand: Direct
Name: ybeZ [H]
Synonym: bglu_1g30470
Alternate gene names: 238028583
Gene position: 3462012-3463070 (Clockwise)
Preceding gene: 238028582
Following gene: 238028584
Centisome position: 88.62
GC content: 70.92
Gene sequence:
>1059_bases TTGAAAGCCACCCAAGCCCTGGAATTCACCGCGCCGCGTGACGACAACGCGCGCCTCGCGAACCTCTGCGGTCCGCTCGA CGAGAACCTTCGGCAGATCGAGCAGGCGCTCGACGTCACGCTGCAGCGTCGCGGCCACCGGATCGCGATCCGCGGCCGCG GCGCGAAGCTTGCGCTGGCCGCCCTGGAAAACTTCTACAACCGCGCGCGCGATCCGCTCTCGCTCGACGACATCCAGCTC GCGCTGGTCGAGGCGCGTCACCCGGGCAGCGGGCGCGACGGCGGCGGCCTGGGCGACGACGCGCCGGACGTGCGCTTTCG CGGCAGCCCCGACCACCCGTTCGACGAGCCCGCCGCGGCTCCGGCCGCCCCGCCCGACGAAGAGCCGGCGCCGAAGCTCT ACACGCGCCGCGCCGACCTGCGCGGCCGCACCCCGGCGCAGCGCGAGTACCTGAAGCAGATCCTCTCGCACGACGTGACG TTCGGCATCGGGCCGGCCGGCACCGGCAAGACCTACCTCGCCGTGGCCTGCGCGGTGGACGCGCTCGAACGCGACCAGGT CAAGCGCATCGTGCTGACGCGGCCGGCCGTCGAGGCCGGCGAGCGGCTCGGCTTCCTGCCAGGCGACCTTTCGCAGAAGG TCGATCCGTACCTGCGCCCGCTCTACGACGCGCTCTACGACCTGCTCGGCTTCGACAAGACCGCCAAGATGTTCGAGCGC CAGATGATCGAGATCGCGCCGCTCGCCTACATGCGCGGGCGCACGCTGAACCATGCGTTCATCATCCTCGACGAGGCGCA GAACACCACGCCCGAGCAGATGAAGATGTTCCTGACGCGGATCGGCTTCGGCTCGAAGGCGGTGGTCACCGGCGACACCA CCCAGATCGACCTGCCGCGCGGCCACAAGAGCGGCCTCGTCGAGGCCCAGCAGGTGCTCGGCCAGGTGCGCGGCATCGCG CTCACGCGCTTCACGAGCGCCGACGTGGTGCGCCATCCGCTGGTGGCGCGGATCGTCGAGGCCTACGACGAGTTCCACGC GCAGCGCCAGGACGACTGA
Upstream 100 bases:
>100_bases ATGCCTATCCGCATTCGCTGCGCGGCGAACTCGTGCTGGCCCACGACGACGCCAGCACGGCCAGCCACTGAGCGCCCAAC CGAAGGAAGCCGACGCAACC
Downstream 100 bases:
>100_bases GCGGCGCGCCCGCTTCGCCGTCGCGGCGCGACCGTCCGTCACGGCAGGCGGGCGGCCCCCGGCAGCCGCGCCGGCGCGAA GCCGCGCCGGCGCGGCGCGG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKATQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLQRRGHRIAIRGRGAKLALAALENFYNRARDPLSLDDIQL ALVEARHPGSGRDGGGLGDDAPDVRFRGSPDHPFDEPAAAPAAPPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVT FGIGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLSQKVDPYLRPLYDALYDLLGFDKTAKMFER QMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTTQIDLPRGHKSGLVEAQQVLGQVRGIA LTRFTSADVVRHPLVARIVEAYDEFHAQRQDD
Sequences:
>Translated_352_residues MKATQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLQRRGHRIAIRGRGAKLALAALENFYNRARDPLSLDDIQL ALVEARHPGSGRDGGGLGDDAPDVRFRGSPDHPFDEPAAAPAAPPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVT FGIGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLSQKVDPYLRPLYDALYDLLGFDKTAKMFER QMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTTQIDLPRGHKSGLVEAQQVLGQVRGIA LTRFTSADVVRHPLVARIVEAYDEFHAQRQDD >Mature_352_residues MKATQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLQRRGHRIAIRGRGAKLALAALENFYNRARDPLSLDDIQL ALVEARHPGSGRDGGGLGDDAPDVRFRGSPDHPFDEPAAAPAAPPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVT FGIGPAGTGKTYLAVACAVDALERDQVKRIVLTRPAVEAGERLGFLPGDLSQKVDPYLRPLYDALYDLLGFDKTAKMFER QMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTTQIDLPRGHKSGLVEAQQVLGQVRGIA LTRFTSADVVRHPLVARIVEAYDEFHAQRQDD
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=343, Percent_Identity=53.935860058309, Blast_Score=329, Evalue=1e-91, Organism=Escherichia coli, GI1787257, Length=204, Percent_Identity=48.0392156862745, Blast_Score=185, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38850; Mature: 38850
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLQRRGHRIAIRGRGAKLALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH ALENFYNRARDPLSLDDIQLALVEARHPGSGRDGGGLGDDAPDVRFRGSPDHPFDEPAAA HHHHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC PAAPPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTFGIGPAGTGKTYLAVACAVD CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHH ALERDQVKRIVLTRPAVEAGERLGFLPGDLSQKVDPYLRPLYDALYDLLGFDKTAKMFER HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH QMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTTQIDLPR HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCC GHKSGLVEAQQVLGQVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQRQDD CCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKATQALEFTAPRDDNARLANLCGPLDENLRQIEQALDVTLQRRGHRIAIRGRGAKLALA CCCCCCEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH ALENFYNRARDPLSLDDIQLALVEARHPGSGRDGGGLGDDAPDVRFRGSPDHPFDEPAAA HHHHHHHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC PAAPPDEEPAPKLYTRRADLRGRTPAQREYLKQILSHDVTFGIGPAGTGKTYLAVACAVD CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHH ALERDQVKRIVLTRPAVEAGERLGFLPGDLSQKVDPYLRPLYDALYDLLGFDKTAKMFER HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH QMIEIAPLAYMRGRTLNHAFIILDEAQNTTPEQMKMFLTRIGFGSKAVVTGDTTQIDLPR HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEECCC GHKSGLVEAQQVLGQVRGIALTRFTSADVVRHPLVARIVEAYDEFHAQRQDD CCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]