| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238028557
Identifier: 238028557
GI number: 238028557
Start: 3429200
End: 3430168
Strand: Direct
Name: 238028557
Synonym: bglu_1g30210
Alternate gene names: NA
Gene position: 3429200-3430168 (Clockwise)
Preceding gene: 238028555
Following gene: 238028558
Centisome position: 87.78
GC content: 74.82
Gene sequence:
>969_bases ATGCTCGCGCTCCTGTTGCTGATACCGCTTCTGGCCGGCCTGATCGCCGGCTTCCGGGACGGCGTGCTGGCCGGCCTCGC CGCCGGCGCGGTGGCCACCGTCGCCGAACTCCTGCTGCTGTCGGTGGCGGGCGTGCTGGCCCGGCGCCGCGACGCGAAGG CCGCCGCGCGCCGCGCCGCCGCCGCGGAAGACGCCGAGCGGCTCGCCGCTCCCGATCCGCTGGCCGCCGAGCCCTCCGCC GCGCCCGGGATCGATGCGCACGCATCCACTCCGGCCCCGGCGCGCTCGCCCGCGGCACGCCTGGCCGAGATCCGGGCGCG CCGCCCCGACGACCGGCCGCGCCCGATCGACCTGCTGCCAAGCCCGCTCGGCAGCCGCTCCGCATTCCTCGGCGCCGACC AGGGCCAGCCGCTGCCGGCCTTCCTCGGCGACTACGCGAGCTACCAGCGCATCGTGCTCGACGTGGACCTGCGCGCGACC TCGCCCGGCGCCGTTCATCGCCAGCTCTACGCGGGCCTGCGCGCGGCCTGCCTCAAGCACGTCGACATCGACGACAATCC GGCCGAACAGCAGCCCGGCATCGCGCCGCTCGACGATCTGCCCGAGCACTTCGAGGCCCTCAAGCGCGCCGACGACACGC TGTTCGTCGCGTTCCGCAGCCGGGACGCGCGCTGGGCCGGCTTTCGGCTCGGCCGCGACAGCTTCCGCTTCCCGCTCGAC CGGCTCGCCGGGCTCGCGCTGAACGTCGGCATCCCGGCCAAGGGCGCAGGCGGCTACGAGATCGAGGCGGTGTTCGACCG GCCGCGCCGCGACACCGAGGCCGAGGCCGACTGGCAATGGCACGGCAGCGCGTTCCAGCCCTCGCTGCCCTATGCCGACC GCCACTCGTTCGCGCTGCTCTACGCGCTGACCACGATCGCGCAGCTGTTCGACGTGCGGATCGTCTGCTCGACGTTCTCC GACTGCTGA
Upstream 100 bases:
>100_bases CGCTTATCATCGTGCCGTACCGCGGCGCCCGCGCCTGCCTCGCCGGGCGGCGAAGCGGGATGCCGGCCTTGCACCGCCCC ACCCCCACGATCGAACGCCG
Downstream 100 bases:
>100_bases GCGGCGGGCCGCCGGCACGCCGTCGCACGCTCGCGCGCGCCACGCGAGCCCGCAAGCAGCCCGCCTTGGCGCGGCAGCCG CTCGCAGCCACCGCGCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MLALLLLIPLLAGLIAGFRDGVLAGLAAGAVATVAELLLLSVAGVLARRRDAKAAARRAAAAEDAERLAAPDPLAAEPSA APGIDAHASTPAPARSPAARLAEIRARRPDDRPRPIDLLPSPLGSRSAFLGADQGQPLPAFLGDYASYQRIVLDVDLRAT SPGAVHRQLYAGLRAACLKHVDIDDNPAEQQPGIAPLDDLPEHFEALKRADDTLFVAFRSRDARWAGFRLGRDSFRFPLD RLAGLALNVGIPAKGAGGYEIEAVFDRPRRDTEAEADWQWHGSAFQPSLPYADRHSFALLYALTTIAQLFDVRIVCSTFS DC
Sequences:
>Translated_322_residues MLALLLLIPLLAGLIAGFRDGVLAGLAAGAVATVAELLLLSVAGVLARRRDAKAAARRAAAAEDAERLAAPDPLAAEPSA APGIDAHASTPAPARSPAARLAEIRARRPDDRPRPIDLLPSPLGSRSAFLGADQGQPLPAFLGDYASYQRIVLDVDLRAT SPGAVHRQLYAGLRAACLKHVDIDDNPAEQQPGIAPLDDLPEHFEALKRADDTLFVAFRSRDARWAGFRLGRDSFRFPLD RLAGLALNVGIPAKGAGGYEIEAVFDRPRRDTEAEADWQWHGSAFQPSLPYADRHSFALLYALTTIAQLFDVRIVCSTFS DC >Mature_322_residues MLALLLLIPLLAGLIAGFRDGVLAGLAAGAVATVAELLLLSVAGVLARRRDAKAAARRAAAAEDAERLAAPDPLAAEPSA APGIDAHASTPAPARSPAARLAEIRARRPDDRPRPIDLLPSPLGSRSAFLGADQGQPLPAFLGDYASYQRIVLDVDLRAT SPGAVHRQLYAGLRAACLKHVDIDDNPAEQQPGIAPLDDLPEHFEALKRADDTLFVAFRSRDARWAGFRLGRDSFRFPLD RLAGLALNVGIPAKGAGGYEIEAVFDRPRRDTEAEADWQWHGSAFQPSLPYADRHSFALLYALTTIAQLFDVRIVCSTFS DC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34447; Mature: 34447
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALLLLIPLLAGLIAGFRDGVLAGLAAGAVATVAELLLLSVAGVLARRRDAKAAARRAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEDAERLAAPDPLAAEPSAAPGIDAHASTPAPARSPAARLAEIRARRPDDRPRPIDLLP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC SPLGSRSAFLGADQGQPLPAFLGDYASYQRIVLDVDLRATSPGAVHRQLYAGLRAACLKH CCCCCCCEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VDIDDNPAEQQPGIAPLDDLPEHFEALKRADDTLFVAFRSRDARWAGFRLGRDSFRFPLD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEECCCHHCCCHH RLAGLALNVGIPAKGAGGYEIEAVFDRPRRDTEAEADWQWHGSAFQPSLPYADRHSFALL HHCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHH YALTTIAQLFDVRIVCSTFSDC HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLALLLLIPLLAGLIAGFRDGVLAGLAAGAVATVAELLLLSVAGVLARRRDAKAAARRAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAEDAERLAAPDPLAAEPSAAPGIDAHASTPAPARSPAARLAEIRARRPDDRPRPIDLLP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC SPLGSRSAFLGADQGQPLPAFLGDYASYQRIVLDVDLRATSPGAVHRQLYAGLRAACLKH CCCCCCCEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH VDIDDNPAEQQPGIAPLDDLPEHFEALKRADDTLFVAFRSRDARWAGFRLGRDSFRFPLD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEECCCHHCCCHH RLAGLALNVGIPAKGAGGYEIEAVFDRPRRDTEAEADWQWHGSAFQPSLPYADRHSFALL HHCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHH YALTTIAQLFDVRIVCSTFSDC HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA