| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028554
Identifier: 238028554
GI number: 238028554
Start: 3425314
End: 3426138
Strand: Reverse
Name: 238028554
Synonym: bglu_1g30180
Alternate gene names: NA
Gene position: 3426138-3425314 (Counterclockwise)
Preceding gene: 238028556
Following gene: 238028551
Centisome position: 87.7
GC content: 74.42
Gene sequence:
>825_bases ATGAGCCGATGGATCGCCGGACTGCCGATGTACAACGTGACGCCGCGCCATGGCGCGCTCTGGCGCGCACTGCTCGACGA TGCGCTCGAGGCGTTCGCGCGGCGCGGCGGCACGCGCGAGGTCAGCGTGCTCGGCGAGCCGTTCGGCGAACTGATGCCGC TCTGGCGCCGCGCCGATCTGCTGCTGTCGCAGACCTGCGGCTATCCGTTTCGGATGCTCGGGCTCGCCGGGCTTGCGCGG CTGATCGCGACGCCGTGCTTCGACGCCGAGGGCTGCGACGGCGCCCGGTATTCGAGCGTGCTGGTGGTGTCGGCCGCCGC GCAGGCGGGCGGCGCCACCACGCTGGCCGCCTGCCGGGGCCTGCGCGCGGCCTGCAACGGCAACGATTCGCACAGCGGCA TGAACGCGTTTCGCCATGCCGTCGCGCCGCTCGCGCAGGGCGGGCGATTCTTCGCCTCGGTCACGGCGTTCGGCTCGCAT CGCAACGTGCTCGACGCGCTGGCGGCGGACCGGGCCGATTGCGCGGCGATCGACTGCGTGACCTTCGCCTATCTGCGCGA CGCCCAGCCCGAGCGGCTGCGCGAGATTCGCGTGATCGGCGCGAGCGCGGGCGCGCCGGGGCTGCCGCTCATCGCCTCGC GCCGTCTCGGCGACCACCAGGCCGGCTGGCTGCGCGAGGCGCTCGACGCGGCGTGCCGCGCCGATCCGGCGCGCGCGCGG GCGCTGCGCCTGCGCGGCTTCGAGGCATTGGAGGAGGCCGATTACGAACCGATCGCGCGGATGGCCGACGAGGCCGCGGC GCTCGGCTATCCGCGGCTGGCCTGA
Upstream 100 bases:
>100_bases TGCTTATCAGGCATCAGGCGCGCGGCCGCCGCGATCCGGGCGCAGAATGAGGGCCCGCCACGCCACCTTTTCCGAACCTG CTGGCCAGGAGCCGCCGCGC
Downstream 100 bases:
>100_bases CGGGCGCGCCGGCAGCAGGCGCCGGCACCGCCGCACGGCGGCGCGCCGCCCGTGCGCACAGCACTTGTCCACCGCGGCGC TTGGATAAATGCTGTGCGCG
Product: phosphate/phosphonate ABC transporter periplasmic ligand binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSRWIAGLPMYNVTPRHGALWRALLDDALEAFARRGGTREVSVLGEPFGELMPLWRRADLLLSQTCGYPFRMLGLAGLAR LIATPCFDAEGCDGARYSSVLVVSAAAQAGGATTLAACRGLRAACNGNDSHSGMNAFRHAVAPLAQGGRFFASVTAFGSH RNVLDALAADRADCAAIDCVTFAYLRDAQPERLREIRVIGASAGAPGLPLIASRRLGDHQAGWLREALDAACRADPARAR ALRLRGFEALEEADYEPIARMADEAAALGYPRLA
Sequences:
>Translated_274_residues MSRWIAGLPMYNVTPRHGALWRALLDDALEAFARRGGTREVSVLGEPFGELMPLWRRADLLLSQTCGYPFRMLGLAGLAR LIATPCFDAEGCDGARYSSVLVVSAAAQAGGATTLAACRGLRAACNGNDSHSGMNAFRHAVAPLAQGGRFFASVTAFGSH RNVLDALAADRADCAAIDCVTFAYLRDAQPERLREIRVIGASAGAPGLPLIASRRLGDHQAGWLREALDAACRADPARAR ALRLRGFEALEEADYEPIARMADEAAALGYPRLA >Mature_273_residues SRWIAGLPMYNVTPRHGALWRALLDDALEAFARRGGTREVSVLGEPFGELMPLWRRADLLLSQTCGYPFRMLGLAGLARL IATPCFDAEGCDGARYSSVLVVSAAAQAGGATTLAACRGLRAACNGNDSHSGMNAFRHAVAPLAQGGRFFASVTAFGSHR NVLDALAADRADCAAIDCVTFAYLRDAQPERLREIRVIGASAGAPGLPLIASRRLGDHQAGWLREALDAACRADPARARA LRLRGFEALEEADYEPIARMADEAAALGYPRLA
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29211; Mature: 29079
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRWIAGLPMYNVTPRHGALWRALLDDALEAFARRGGTREVSVLGEPFGELMPLWRRADL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHH LLSQTCGYPFRMLGLAGLARLIATPCFDAEGCDGARYSSVLVVSAAAQAGGATTLAACRG HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEHHHCCCHHHHHHHHH LRAACNGNDSHSGMNAFRHAVAPLAQGGRFFASVTAFGSHRNVLDALAADRADCAAIDCV HHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH TFAYLRDAQPERLREIRVIGASAGAPGLPLIASRRLGDHQAGWLREALDAACRADPARAR HHHHHHCCCHHHHHHHHHEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH ALRLRGFEALEEADYEPIARMADEAAALGYPRLA HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRWIAGLPMYNVTPRHGALWRALLDDALEAFARRGGTREVSVLGEPFGELMPLWRRADL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHH LLSQTCGYPFRMLGLAGLARLIATPCFDAEGCDGARYSSVLVVSAAAQAGGATTLAACRG HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEHHHCCCHHHHHHHHH LRAACNGNDSHSGMNAFRHAVAPLAQGGRFFASVTAFGSHRNVLDALAADRADCAAIDCV HHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH TFAYLRDAQPERLREIRVIGASAGAPGLPLIASRRLGDHQAGWLREALDAACRADPARAR HHHHHHCCCHHHHHHHHHEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH ALRLRGFEALEEADYEPIARMADEAAALGYPRLA HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA