Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028547

Identifier: 238028547

GI number: 238028547

Start: 3416438

End: 3417175

Strand: Direct

Name: 238028547

Synonym: bglu_1g30110

Alternate gene names: NA

Gene position: 3416438-3417175 (Clockwise)

Preceding gene: 238028544

Following gene: 238028552

Centisome position: 87.46

GC content: 72.63

Gene sequence:

>738_bases
ATGAGTGAAAAACTGTTCGTTGCCGGCGCGACCGGCGTGATCGGCCGCGTGCTGGTGCCGCTGCTGGTCGAAGCCGGCTA
TCGGGTCTATGGCGCCACGCGCCGTGCCGAGCGCGCGGCGCTGCTCACCGGCCTGGGCGCCGAGCCGGTGGTGGTCGACG
TGTTCAACGCCGACCGGCTCACGAGCGAGCTGCGCCGCATCGCGCCGGCCGCGGTGATCCACCAGTTGACCGACCTGCCG
GCCGGCCTCGATCCCTCGCAGATGGCGCAGGCCATCGTCAACAACGCGCGGATTCGCGGCGAGGGCACGCGCAATCTCGT
GCAGGCGTCGCTGGCCGCGGGCTGCCGGCGCATGATCGCGCAGAGCATCGCCTGGGCGTTCGCGTCGCTGGGCGAGAAGC
CCTACGGCGAGGCGCAGCCGCTCGACCTGGCGGCCGAGGGCGCCCGCAAGATCTCGGTGGGCGGGGTGGCCGCGCTCGAG
CAGGCCGTGTTCGACACGCCGGAGCTGCAAGGCGCGGTGCTGCGCTACGGCCGCCTCTACGGCCCGCAAACGGGCGCCGA
CGCGCCGCCCGCGGCGCCGGCGCTGCATGTCAACGACGCGGCGCGCGCGGCGCTGCTGGTGCTGCAGAAGAAGGCCACCG
GCGTGTTCAATATCGTCGACGACAACGGCGAGGTATCCAACCAGAAGGCCCGGCGCGAACTGGGCTGGGTGCCGGGCGAA
GCGCACGTGCAGGCCTGA

Upstream 100 bases:

>100_bases
TAGGCTGTCCCGTCATGCGCCGCTCGCCGTCCGGCAAGGGCCGACGCGACGCGGCCCGGTCGAAGCCACCGAAACCATCA
AAGAACCCCGGAGCCCTATC

Downstream 100 bases:

>100_bases
GGCCGGGGCGCGGCGGGCCGGCCCGCCCGATTGCTCAGCCGGCCGGAAACGCCGCCGTGACGAGCAGCCCGCGCCCGCCC
GGCCCGTCGTCGAGCCGCAG

Product: dTDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: DTDP-Glucose 4 6-Dehydratase; Dehydrogenase; Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Carbon-Nitrogen Family Hydrolase; Steroid Protein ; NAD Dependent Epimerase/Dehydratase Family; Glucose Epimerase Protein

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSEKLFVAGATGVIGRVLVPLLVEAGYRVYGATRRAERAALLTGLGAEPVVVDVFNADRLTSELRRIAPAAVIHQLTDLP
AGLDPSQMAQAIVNNARIRGEGTRNLVQASLAAGCRRMIAQSIAWAFASLGEKPYGEAQPLDLAAEGARKISVGGVAALE
QAVFDTPELQGAVLRYGRLYGPQTGADAPPAAPALHVNDAARAALLVLQKKATGVFNIVDDNGEVSNQKARRELGWVPGE
AHVQA

Sequences:

>Translated_245_residues
MSEKLFVAGATGVIGRVLVPLLVEAGYRVYGATRRAERAALLTGLGAEPVVVDVFNADRLTSELRRIAPAAVIHQLTDLP
AGLDPSQMAQAIVNNARIRGEGTRNLVQASLAAGCRRMIAQSIAWAFASLGEKPYGEAQPLDLAAEGARKISVGGVAALE
QAVFDTPELQGAVLRYGRLYGPQTGADAPPAAPALHVNDAARAALLVLQKKATGVFNIVDDNGEVSNQKARRELGWVPGE
AHVQA
>Mature_244_residues
SEKLFVAGATGVIGRVLVPLLVEAGYRVYGATRRAERAALLTGLGAEPVVVDVFNADRLTSELRRIAPAAVIHQLTDLPA
GLDPSQMAQAIVNNARIRGEGTRNLVQASLAAGCRRMIAQSIAWAFASLGEKPYGEAQPLDLAAEGARKISVGGVAALEQ
AVFDTPELQGAVLRYGRLYGPQTGADAPPAAPALHVNDAARAALLVLQKKATGVFNIVDDNGEVSNQKARRELGWVPGEA
HVQA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25702; Mature: 25571

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKLFVAGATGVIGRVLVPLLVEAGYRVYGATRRAERAALLTGLGAEPVVVDVFNADRL
CCCCEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
TSELRRIAPAAVIHQLTDLPAGLDPSQMAQAIVNNARIRGEGTRNLVQASLAAGCRRMIA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHH
QSIAWAFASLGEKPYGEAQPLDLAAEGARKISVGGVAALEQAVFDTPELQGAVLRYGRLY
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHC
GPQTGADAPPAAPALHVNDAARAALLVLQKKATGVFNIVDDNGEVSNQKARRELGWVPGE
CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCC
AHVQA
CCCCC
>Mature Secondary Structure 
SEKLFVAGATGVIGRVLVPLLVEAGYRVYGATRRAERAALLTGLGAEPVVVDVFNADRL
CCCEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
TSELRRIAPAAVIHQLTDLPAGLDPSQMAQAIVNNARIRGEGTRNLVQASLAAGCRRMIA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHH
QSIAWAFASLGEKPYGEAQPLDLAAEGARKISVGGVAALEQAVFDTPELQGAVLRYGRLY
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHC
GPQTGADAPPAAPALHVNDAARAALLVLQKKATGVFNIVDDNGEVSNQKARRELGWVPGE
CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCC
AHVQA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA